Gene Details:

  • Gene ID: Lus10019354
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Linum usitatissimum
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_023873318.1  — cytochrome P450 CYP749A22-like
  • Refseq:  XP_023924624.1  — cytochrome P450 CYP749A22-like
  • TrEMBL:  A0A2N9F6B4  — A0A2N9F6B4_FAGSY; Uncharacterized protein
  • STRING:  Lus10019354  — (Linum usitatissimum)

Gene Ontology:

  • GO:0055114  — Biological Process — oxidation-reduction process
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0005506  — Molecular Function — iron ion binding
  • GO:0016705  — Molecular Function — oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
  • GO:0020037  — Molecular Function — heme binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >Lus10019354|Linum_usitatissimum|B3|Lus10019354
    ATGGTTAAGCAAGCTCTATTTGACAAAAATGGTAACTTCCCAAAAGCTCAATGGGGTTTTGCTTATGCTCGCAAGATTATGGGCACTGGGATTGTGACTAATGATGGTGAGAAATGGTCCAAGATCAGGAAGCTTGCTAATCTCTCTTTCCATGGAGTCAAGCTCAAAAGTATGGTGCCTGAGATGATCGATGCAACAGAAAACATGTTGAGGAGATGGAAGGACAAGGAGGAAGTACATGAAGAGATTGAAGTTTATGAAGAGTTCAGGATGTTGACAGGCGAAATGATTTCGAGGACTGCTTTCGGAACTAGTTTCGACGAAGGAAGACAGATCTGTGACATGATTGTCAAGATGAAATTGTTAATTGATAAGAACGTCTTCAAGTTCAGACTTCCAATCGTCAGCAAGATTTTCAAGAGTCGTGATTACAGGGAAGTTGGCAGGCTCGAAAGGAGGATTCGAGCCTGCATTTTGGAAATTGTGAGCAAGAGAGAAGAAGATCATGGTGTGGTGAAAGACGATTATCTCGGCCTGCTTATACAAGCTCACCATGAACGAGAGGAATCGAGTAAAATTTCGATTGACGATCTCGTTGATGAGTTCAAAACGTTGTACTTAGCAGGGCATCACACGACGAATGCCCTGATTTCTTGGATTGTCCTGCTTCTGGCAATCCACCAGAATTGGCAACAGGAGGCCAGAAATGAAGTTTTCAGTGTCTTTGGTCGTGACGAATCTCCTGATGTTGATGGGATCTCGAAGCTCGAAACGATGGGGATGATCATCAATGAAACGCTAAGACTATACCCTCCCGTAACAGCATTGGGGGTGCGAAGAATCGACAAAGATGATGTAACGCTGGGGAAGCTCACCCTCCATGCTGACATCAGACTGCAAATTCCAACTTTATGTCTCCATCGCAATCCCGGAATCTGGGGTGAAGATGCAAACCTATTCAAGCCCGAGAGGTTCTCCGAAGGAGTTGCGAAAGCCACAAACAATAACCCTACCGCCTTCATCCCCTTCGGGATGGGACCCCGAAACTGCGTGGGAATCGACATTGGCAAGGACATGGTGAGAGTTGCACTTTCGATGATTCTGCAGCGCTTTTGTTTCACTTTATCGCCCGGTTATGTCCATTCGCCTGATCCGTATATCCCGACAATTAGTCCCGGGAAGGGAATTCAAGTGATCTTGCATGCCCTCTGTGAGCACCATGAGGTTAGGACTGACAGCTTGAGCAGTCTCAAGGAAGTGAAGTGTCCAGCTATGATTCGTGCAGAAGAGGTCCAGTTAAATTTAGAGCCTGCTTTTCCTAGCTTTCTGGTATATTTAGTCAGATCACATCTTGGACGTTGGTCCTGGATGGGTCTTCCGGGGCCTTTCTGTAGAGCAAATTTACCACGGGGGGATACAATAGTTACTCTGCAAGACGAGGATGGGAAGGAATTCAACATCAAATACATTGGACACAGGACGGGATTGAGTACTGGATGGAGACAGTTCTGTGTTGCGCAGAACTTGCTTGAAGGAGATGTTTTAGTGTTCCAGTTAGTTGGAAACTGCAGATTTAGGGTGAGTACTGAGTTTACCTTGTCTTCTGCCAACTAA
Protein Sequence:
  • >Lus10019354|Linum_usitatissimum|B3|Lus10019354
    MVKQALFDKNGNFPKAQWGFAYARKIMGTGIVTNDGEKWSKIRKLANLSFHGVKLKSMVPEMIDATENMLRRWKDKEEVHEEIEVYEEFRMLTGEMISRTAFGTSFDEGRQICDMIVKMKLLIDKNVFKFRLPIVSKIFKSRDYREVGRLERRIRACILEIVSKREEDHGVVKDDYLGLLIQAHHEREESSKISIDDLVDEFKTLYLAGHHTTNALISWIVLLLAIHQNWQQEARNEVFSVFGRDESPDVDGISKLETMGMIINETLRLYPPVTALGVRRIDKDDVTLGKLTLHADIRLQIPTLCLHRNPGIWGEDANLFKPERFSEGVAKATNNNPTAFIPFGMGPRNCVGIDIGKDMVRVALSMILQRFCFTLSPGYVHSPDPYIPTISPGKGIQVILHALCEHHEVRTDSLSSLKEVKCPAMIRAEEVQLNLEPAFPSFLVYLVRSHLGRWSWMGLPGPFCRANLPRGDTIVTLQDEDGKEFNIKYIGHRTGLSTGWRQFCVAQNLLEGDVLVFQLVGNCRFRVSTEFTLSSAN*