Information report for Lus10015266
Gene Details
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Functional Annotation
- STRING: Lus10015266 — (Linum usitatissimum)
- GO:0010200 — Biological Process — response to chitin
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008080 — Molecular Function — N-acetyltransferase activity
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G14980
- Fragaria vesca: mrna29444.1-v1.0-hybrid
- Gossypium arboreum: Cotton_A_34095_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D12G0646, Gh_A12G0629, Gh_D03G1685, Gh_A02G1527
- Juglans regia: WALNUT_00011203-RA
- Manihot esculenta: Manes.07G115200.1.p, Manes.10G031300.1.p
- Oryza sativa: qCTB7
- Populus trichocarpa: Potri.004G230100.1
- Ziziphus jujuba: XP_015890081.1
Sequences
CDS Sequence:
- >Lus10015266|Linum_usitatissimum|B3|Lus10015266
ATGGCGGAAGAAAAAGGAGCTGGTGGGTGGCCAAAATTGAAAAACCCTCGTTTCTACACGTCCATTCTCAACGACCCAGTTCATGATTCTAAACTGCAAATCCCAGACACGTTTGTTGCAGAGCATGGATCTAGGCTGTCAAAGAAAAAGAAAGTAGTTCTCAAGCTTCCCAGTGGGGCAGAATGGCTAGTGAAAGTGGCGATAAGCAAAGGGGGTAAAATGTGGTTCGACGAGGGTTGGAGAGAGTTCGCCGAGTTCTACACCATAGCACCTGACCACCTTCTGGCTTTTGAGTACCATGGACATGGTAATTTCCATGTGTTCATATTCACAGAAATTGTGTACAGGACCCATCTGCAAGAACCAGATGTGCATGTTAAGCTAGAGTATGGAGCTGATTCGTATGCTGAAAGCTTGCCTTTTTCCCCTAAAACAAGGGATAAAACACCGTTGGAATCTCTGCAACCTCCTCCTAGTAAGCTGAGAAGAACAACACTGAACACTGATCGCCGTTTAGGAGAGTATCTTGGAGATGAGGGTTTGAATCGGGATCTTGGTGGAGCTTCTCAGAAGAGGAAACTGATCAGATTTGCTGGTGAAAAAGAAACTAGCTGTCTTGCTAGAGCTACTGCTGCTTTCAAGTCTGAGAATCCTTTCATCATGAAAGTTATGCAGCCATCATATCTTACCAATGGATCGAAACCGCTGTTTCTGCGATCAAGCTTCTTCTTGGAGAATTTCAAGCATAAAAGTGGAGACATCTTCCTCCACGTACTTGGTGGGAAAACCTGGGAGGTTCAATACAATGTTTATGTGAAGAAGAAAGCAGCAGTCTTTAAAGCCAAAACTTGGGGTGCATTTGCACGAGACAATGGTTTGAAAATCGGCGACGTTTGTGCATTCGAGGTTCTGAAAAAAGGCGAAACTGAGAAGCCTACGTTGAATGTGGCCATCTTCCGTGCTGACCAAGGTATTGACCGAGATGTGCACCCTCCTGATGAGTCGAAACTGAAATCCGCCCTACTACTCTCGGACCGTGAAGGCTCTGAGGGCCGCTCGTCTCGTGGATTTCAAAATGCACCTAATGAAGTGAAGCTCACCATAGGCAATCGGTCTCTTGCAGTTACGTGCGGTGATGAGGATAGATCAGGTAATGGAGTTTTAAACAAAGTAGAAATATTTGTTTTAGCTGGCAATCTCCAATCTCTTACCACATTGTGTATCAATCCATATACAGGAAATTCGAGGAAGCAATCGAACCTCGTTCTTCAATCGTGTGGTGGTTTAGAAGCTGCTAATGCCTTCACCTCAGACTTACCCTTCTTCAAAGTAGTCATGTCACGTGCTCATCTATCCAAGAGCTTCGTGGTGGGTATGATACCAGCGGAGTTCCATAAGCATGTCAACGAGGCGAAAGCAGAGTTGTGGTTTAAAGGCTTACGCTGGGGTGTGAAAATTGCCAACTATACTGGGGGGAGGAATGCCAGGAAGATCATCTCTACTGGATGGAAGAGCTTTGTTAATGCAAATACTCTGAAAAATGGTGATGTCTGTATTTTCGAGTCTCTTAAGGGCGAAGCTGATGATGGTGGCAGTAGGAGAATGACTGACATGGTAAGAAGCGAAGATGAAGGGTTTGAAGGCTCATGGCACGAGGGAACTGTAAGTGGACGTAGAAAGATAGGCTCCTCTGCCGAATTCGAAATCGAGCTTGATCACTTCCTTGATGTTGATGTGGTTACTGTTTCCCTAGTGGTGTCTGATGATGAACAACTCTCTAGTACTCGTGGATACATCAGACCTTTCCCGCCTGAATTCACAACAATAAACGAATACATGCTTCCATTTGGATTATGTGTTGATGTGAATTGCAACGACAAAGGATGGTGGGAAGGGGTGGTTTTCGACTACGAAGATGGTTCGAACCAGAGGAAGGTTTTCTTCCCTGACATTGGCATCGAGATTGTGGTTCCGGTTGGCGAGCTGAGGATCACTCAGGACTGGGACGAAGTATCGGGGAAGTGGAATCATCGAGGGATGTGGCTGTTTCTTGATCTGATCGAGGAGTATACAGGGAAAGGTGGTCGGATTCCGGTCTCTATCAAGCAACTTTGGTATGACTTGCGCCACAAGAAAGGGTTTTGGAACATTGGAGGAGGAGATTGGACCTGCTCTTCAAGACCTGTATGGGAAGAGCTTGTTTCGGATGTGGTTCGTTGCAATCTTGAACTCGTCTCCGATCGTCTCTTTAATGAATTAAGCCTTCCGGATGGTGCTCGAAAGCTATCGGAGCTTGCTAAGTCGGTTAATTCGGTAACTGATAATGCTGACTCAGAGTCTATGCTGCAACAACTTATGTTGACTGAGAAGTCAACTCCAGAAAGGGATGAACTTCTTGCTGAAGTAGTACAAATGACCTCACTAAGCGGCGAGATAGTAGAAGCAGTTTCTAGTTCGAGCGTCATGGAAATCGAAAGCTGCGACTTTGATCAAGCTAAAAACTCAAGCAGCCATGGTAGATCAGACTCTAAGCTGCCACAACCTTTACTGATTGAGAACTCCGTTCCAGAAGGGGATGAAGTTTCTACTTATAGTGCCATGGAAACTGAAAGATGCGACCTTTTGACTCCATCGCTCCGAAAGAACCAAAAGTTTCGCTGGCTACCTGCAGGGCCAGACATGGTTCAGGAACCGAAATACTGCCCTGAGGCTATTGTGAAATATGCACAAGGCAGTGGAGAAATGGTTGCAAAGGCTAAGCAGCATCTCTTATATTTGGAATGGAGCATTCAGTATTACATGGATGAATATAAAAGACCTAGATTCCACTTTATATCACCAGACGGAAAGTGTTATTACTCACTCAAACAGGTTTGTAGGATTCTGGTGAATTCTGAGGATAAAAAGAATCCTCTGAGCGATTCTCGTTACGAATGCCCTAAAGCTATTGTGGACTGTTACAAGGTATCCTGCGCGGGGGGAGCCAGTAAAAATTCAGATGTGATCAAGCGTGCGAAGGAGAACCTTAAGGCTATGGGGTGGAGCATAGAGGAGAAGTTGCTTGGCAATGGAAGGCGTGTGAAGGTGTATAAGTCGCCCAGGGGGCAGTCTTACACTTCACTTAGGATGGCTTGCCAAAGCTGTATGAATGAAACTGATACATCAGTTGCTTCTAAGCCTATCAAACTACAGAGGAAGAGTTCTAGACCTAGTGGGGATATTAGAAGAGGCCAAAGAGGAAAAACACATCAAACAGGAGCTCAACCAGACGGCATTGTAAAACTTCGCACCCCCCTTCCGAAATCTGTAAGTAGGAAGACGGCTGAAATTTACAGTAGGTTAGCAGACATGAAGAGGCTTACTCAACCGAAGCATCTACGGTCGAGCAAAAGAGTGAAGCTTACGCCGAAGAAATCATCAGGTGGCGATCCTTTGACAATGGTGTCTTGGTTGATAGATAACAATACCATCTTTCCAAGGGAGAAAGTATATTACAGGACAAGTAAGGATGGTGATGATGGTGATTCGAAGCCTAAGGGGAGAATAACTCGGGAAGGAATCAAGTGTTTCTGTTGTATGAAGGTTTTCTCTCTTAGTAGCTTTGAACTTCATGTAGGCAATAAGTACTACAGAAACTACCACCATGGACCAAGTTCCAGCTTGTTTCTAGCTGATGGGAGGTCTCTGTCAGATTGTCAAGTGCAGGTAATGCGCCAGGGGAAGGAGATGAGTTTGAAATCCCAACCACTGAAGAGATTGAAGGGTAGACATGAAGGTGAAAACGACGAAGTTTGTTCTGTCTGTCAGTATGGTGGGGAACTAATCTTATGCGATCAGTGTCCTTCCTCTTTCCACGGTGGTTGCCTTGGTATGCAAGATGTTCCGGGCGGAGACTGGTTCTGCCCCTCATGTTGCTGCAGAACTTGCAAGCGAAAGCAAGTTCTCAAAGACAGTGAGAGCTTCTTGGACGAGAGTATTCTTAAATGCACCCAATGCGAGTACAGTTATCACATTACATGCCTGAAGAAGAATGGAGTAAAGAATAGGTACCTTGGTCATAAAGAAGGAAATTGGTTTTGTGGGAAGAACTGTAAAAGGATATTCGCTGACCTCTCTGCGCATTTGAGAATACCGATTCCAACTGGTGTGGATGACCTTACTTGCACATTGCAAAAGTCTGTATCAGAGTCTGATGGAAGAACAGAATTCAGTGAAGCTTCCGACATTGAGGCTGAAGCTCAGAGCTACGCGAAACTTGGCATTGCTCTTCACGTGATCCACGAGTGTTTCGAGCCTCTTGAAGAATCCAGCACGGGAAGAGATGTCGTGAGTGATGTTATCTTCAGTCAAAGGTCGGAAATCAGACGCCTGGATTTTCGAGGCTTCTATACCGTGCTCTTGGAGAAAGACGATGAAGTCATTAGTGTCGCAACTATAAGAATCTTCGGAGACAAAGTGGCAGAAGTGCCTCTAGTTGCAACAAGGCACCAGTATCGTCAGCGCGGGATGTGTCGCATACTAATGTATGTGATTGAAAAGAAGCTGACAGAACTAGGTGTTGAGCGGCTGGTTCTACCTGCTGTTCCTAGCATGTTAAATACATGGACAGGTTCATTTGGGTTCTCAAAGGTTACAGATTCTGAGAGATTGCAGTTTGTGGATCCCATTTTCTTGAACTTTCCAGGCACCATCATGTGTCACAAACTGTTGACCACCAATGAATCAAGTCCATTGAAGAAAGAAATTCCATCACTGCCTTTTCACGGTAACTCCGGAAAAGGTGAAGAAATGGAGCTGCAGCTTGATGGGTCACCCAGCCTGGAATCTGAAGTAGTTCAAGCTGAGAAAACAGAGCAGCAACAGGGAGCACCATTAACAAAATAA
Protein Sequence:
- >Lus10015266|Linum_usitatissimum|B3|Lus10015266
MAEEKGAGGWPKLKNPRFYTSILNDPVHDSKLQIPDTFVAEHGSRLSKKKKVVLKLPSGAEWLVKVAISKGGKMWFDEGWREFAEFYTIAPDHLLAFEYHGHGNFHVFIFTEIVYRTHLQEPDVHVKLEYGADSYAESLPFSPKTRDKTPLESLQPPPSKLRRTTLNTDRRLGEYLGDEGLNRDLGGASQKRKLIRFAGEKETSCLARATAAFKSENPFIMKVMQPSYLTNGSKPLFLRSSFFLENFKHKSGDIFLHVLGGKTWEVQYNVYVKKKAAVFKAKTWGAFARDNGLKIGDVCAFEVLKKGETEKPTLNVAIFRADQGIDRDVHPPDESKLKSALLLSDREGSEGRSSRGFQNAPNEVKLTIGNRSLAVTCGDEDRSGNGVLNKVEIFVLAGNLQSLTTLCINPYTGNSRKQSNLVLQSCGGLEAANAFTSDLPFFKVVMSRAHLSKSFVVGMIPAEFHKHVNEAKAELWFKGLRWGVKIANYTGGRNARKIISTGWKSFVNANTLKNGDVCIFESLKGEADDGGSRRMTDMVRSEDEGFEGSWHEGTVSGRRKIGSSAEFEIELDHFLDVDVVTVSLVVSDDEQLSSTRGYIRPFPPEFTTINEYMLPFGLCVDVNCNDKGWWEGVVFDYEDGSNQRKVFFPDIGIEIVVPVGELRITQDWDEVSGKWNHRGMWLFLDLIEEYTGKGGRIPVSIKQLWYDLRHKKGFWNIGGGDWTCSSRPVWEELVSDVVRCNLELVSDRLFNELSLPDGARKLSELAKSVNSVTDNADSESMLQQLMLTEKSTPERDELLAEVVQMTSLSGEIVEAVSSSSVMEIESCDFDQAKNSSSHGRSDSKLPQPLLIENSVPEGDEVSTYSAMETERCDLLTPSLRKNQKFRWLPAGPDMVQEPKYCPEAIVKYAQGSGEMVAKAKQHLLYLEWSIQYYMDEYKRPRFHFISPDGKCYYSLKQVCRILVNSEDKKNPLSDSRYECPKAIVDCYKVSCAGGASKNSDVIKRAKENLKAMGWSIEEKLLGNGRRVKVYKSPRGQSYTSLRMACQSCMNETDTSVASKPIKLQRKSSRPSGDIRRGQRGKTHQTGAQPDGIVKLRTPLPKSVSRKTAEIYSRLADMKRLTQPKHLRSSKRVKLTPKKSSGGDPLTMVSWLIDNNTIFPREKVYYRTSKDGDDGDSKPKGRITREGIKCFCCMKVFSLSSFELHVGNKYYRNYHHGPSSSLFLADGRSLSDCQVQVMRQGKEMSLKSQPLKRLKGRHEGENDEVCSVCQYGGELILCDQCPSSFHGGCLGMQDVPGGDWFCPSCCCRTCKRKQVLKDSESFLDESILKCTQCEYSYHITCLKKNGVKNRYLGHKEGNWFCGKNCKRIFADLSAHLRIPIPTGVDDLTCTLQKSVSESDGRTEFSEASDIEAEAQSYAKLGIALHVIHECFEPLEESSTGRDVVSDVIFSQRSEIRRLDFRGFYTVLLEKDDEVISVATIRIFGDKVAEVPLVATRHQYRQRGMCRILMYVIEKKLTELGVERLVLPAVPSMLNTWTGSFGFSKVTDSERLQFVDPIFLNFPGTIMCHKLLTTNESSPLKKEIPSLPFHGNSGKGEEMELQLDGSPSLESEVVQAEKTEQQQGAPLTK*