Information report for KN540326.1_FGP002
Gene Details
|
|
Functional Annotation
- Refseq: XP_015614209.1 — B3 domain-containing protein Os03g0120900
- Swissprot: Q5JNA1 — Y1237_ORYSJ; B3 domain-containing protein Os03g0120900
- TrEMBL: A2WUM3 — A2WUM3_ORYSI; Uncharacterized protein
- TrEMBL: A2ZXE3 — A2ZXE3_ORYSJ; Uncharacterized protein
- STRING: OGLUM01G33420.2 — (Oryza glumipatula)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >KN540326.1_FGP002|Oryza_longistaminata|B3|KN540326.1_FGP002
ATGGCTTTGACAGCCAAGGAGATACCTCAAGGCTTCCTTATTCACATTCCAGAGGTGGACCACAGTACTTCTGATGCTTCATTACCATCATCTGCCAAAGGCACGCTTCAGAATTCAGAAGGGAAGACTTGGCCTGTTGAGCTAGAGAAACTTGATGGCCATGTATTTCTGACCATTGGATGGGCGAAGTTTGTGGAGGACAATTCTTTGAGGGAATATGAGTTCCTTCTCTTCAGATATGATGATAACATGCATTTCATGGTTTTGCCATTTGGTCTGAATGCTTGTGAGAAAGTAATTCGGTCTTCAGGAAGTCCACAAGGAAAACTTCCATGTGATATATTCTGCTGTACTAAGAGGGGTCGGGATGGTGATAGACTAACAGAGGCAGCCAACAGTCTCACGCCTAGTCATTCACAGGTATTGCAAAGGACAACTCAAGGCCATGAGCTTATTTCACCACAAAGTTTCCCTGATCAACATGAAGTATGCAGCTCGAAAGATGGGTTAGATGAACACTTATCACTGAACGGGCCAATGGAGAATGATAAAGCTAATGCGATAGCTGAAGTAATGAGCATATTGGATGTTGACAAAGTGACAGTTGAATTATTCTGTGCAATGCTTGTTTTCTATAAATGGAATGTGGATGCAGTGGCAGAAGACTTTGACATATGTAGGGGCAAACCGCAAATTCAGAACCTGTTTCTGAAGCACAAACTTCATTTTCAATTTGATATTGTAAAGAGGAAACTACGGAAGTTCTTCCCTCCAGATGATTATTGTTCTTCTCCAATACTTGAGAGTAGGAAGTGCAGCCTTGAGGAACCTAAGTTGTCTAACCAACCACTGCAATGTGACTTGACAACAGAGAAGTGTAGGCTAGTTGATGAGCATGATTTATGTAATTTTTCTCAGAAAAAGAGAAGGAAGCGAGGTTCATTTTGTAGTCCTGAAACTCCACGAAGATCACCAAGACTGGCACGCCAGAATAATGCTCATGACAGTGCAGAGAATACATTGAAAGAAAGATCCGAAGAGCGACAACCATCAGCAGCCAGCATGATAGATCAGGCAGAGAGCAGATCAGAGCAAGCATGTTTATGCCACGATAAAACAGACAGTGGTTCATTATTTCAAGACTCTAAGAAAGTTAAACCAGCACATGGTGAGGTGGATTTATGTGAAGAGCCTCAACATAATCAAGGAGAAAATGAAGGGAATTTAGATCAAGTCAATAATAAAGAAACTGATGAAGAGCAAATAGAAAGAAATGCGGTGGAGACCTCTGAGTCATTCACAAGGAGAGGTTGCATCAAGTCATCGCCAGCCAGTTGTGAGGTGCCAGCATGTTTGAGAAAAAACGAGTTATCTTTGACATGGAAGCACGCTGAACATGTCAACCCTCTTGAGAAAGTTTTACTTGATATCCAACGAGACAATTTCATGAAGACCATCTCACATGTTCAGGGAATCATTCGAAATCATCCTTCAGACCTACTGACTGCTGATGTAATTACAGTTGTTGTGCAGAAAGAAATTCTTAAATGGGATTGTTGTCTTAAGGATAGGGATGCTCAAAGGATAGTGAATGCGTTACTGGAACATGCTAGAAAAATCAAGGAGATGCACAATTTTAACTCGGAGATGCGGAAGGAAGAGTTTTCTGCAAAGCTGAAGGTTCATTTGAAGTGGCAGCTCAAAGAAGTAGAAACTGCATATACCTCATTGGAGTTAGATTACAAGAAAGCAACGAGTGATGATAATATTGCTTTCTCAATGCTGCATGATAAGAAGAAGAAATTGCACAATCTTCAGGATGAGATAACTGGCTTGCAGCAGTCGTTGGAGATGAAGAAGGATGAAATGCAGAAATTGGCTCATCAAGTTGCTAAGCATGAGAGTGTATTTCAGAAGTCTTTAATGGAAAGATTAAGGATTAAGGAAGTTATGAAGGGTTATGAGCAAACTCTTGCTGAAGTTAAAGTTCAGCTAACTTCCACTGAAGTTGGATCAATTGATATAGAGGCATTGGTGAAGTTAGAGATGGATAACATGACCAAGGAAATTGAACTGTCTAAGGAAAGCCTCCTAAACATCACTTTCCATTAA
Protein Sequence:
- >KN540326.1_FGP002|Oryza_longistaminata|B3|KN540326.1_FGP002
MALTAKEIPQGFLIHIPEVDHSTSDASLPSSAKGTLQNSEGKTWPVELEKLDGHVFLTIGWAKFVEDNSLREYEFLLFRYDDNMHFMVLPFGLNACEKVIRSSGSPQGKLPCDIFCCTKRGRDGDRLTEAANSLTPSHSQVLQRTTQGHELISPQSFPDQHEVCSSKDGLDEHLSLNGPMENDKANAIAEVMSILDVDKVTVELFCAMLVFYKWNVDAVAEDFDICRGKPQIQNLFLKHKLHFQFDIVKRKLRKFFPPDDYCSSPILESRKCSLEEPKLSNQPLQCDLTTEKCRLVDEHDLCNFSQKKRRKRGSFCSPETPRRSPRLARQNNAHDSAENTLKERSEERQPSAASMIDQAESRSEQACLCHDKTDSGSLFQDSKKVKPAHGEVDLCEEPQHNQGENEGNLDQVNNKETDEEQIERNAVETSESFTRRGCIKSSPASCEVPACLRKNELSLTWKHAEHVNPLEKVLLDIQRDNFMKTISHVQGIIRNHPSDLLTADVITVVVQKEILKWDCCLKDRDAQRIVNALLEHARKIKEMHNFNSEMRKEEFSAKLKVHLKWQLKEVETAYTSLELDYKKATSDDNIAFSMLHDKKKKLHNLQDEITGLQQSLEMKKDEMQKLAHQVAKHESVFQKSLMERLRIKEVMKGYEQTLAEVKVQLTSTEVGSIDIEALVKLEMDNMTKEIELSKESLLNITFH