Information report for KN539757.1_FGP003
Gene Details
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Functional Annotation
- Refseq: XP_015644837.1 — uncharacterized protein LOC4342906 isoform X1
- TrEMBL: A0A0E0AI15 — A0A0E0AI15_9ORYZ; Uncharacterized protein
- STRING: OGLUM07G08970.1 — (Oryza glumipatula)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0043531 — Molecular Function — ADP binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >KN539757.1_FGP003|Oryza_longistaminata|B3|KN539757.1_FGP003
ATGGAACCTGGAAGCAGCAGTAGGGAGGGGGAGCAGCAGGAGCCAGCAAACGAACGACTAACCGCCACCGGAGGAGGAGGAGGAGGAAGCCCTGTCTCAGATCAGGAACTCTCGGATGGTGAGGAAGTGTCTGATGGTGAGTATCAGGCCGGCGACGATTGCTCTGGCTACGCGGTCCGGGGCCGGGGGTTCGTGGAGAAGGAGCACATGTTCGACAAGGTGGTGACGCCCAGCGACGTTGGGAATCTGGGCCGGCTGGTGATCCCGAGGCAGCACGCGGAGCGCTACTTCCCGCGGGACGTGGATAAGAGGAGCGTCGTCCTCCTATTCGAGGACGGTGCCGGCAAGCCATGGCGTTTCCTCTACTCCTACTGCGGCAGCAGCCAGAGCTACGTCTTCACGTTGGGATGGAGCCACTTCTTCAGGGAGAACCGCCTCAACGCCGGGGACACGGTCTCCTTCTACCGTGGCGCCACCGAGGCCACCCGTGACCGCCTCTTCATCGACTCCAAGCGCCAGATGCACCATATCAATCGCCTCTTTCAGCTGCTGGTTCGGGTAAGAACCATGGTTTCATCCTTCGGTGAAGCTGGCTCGCCGCCGCCGCCCAATTCTCCGCTTCCTACAGCTCAAAATTTCACCTACAAAGCGCTAAAAGATTGCCTCCAAGATCTGCTCTATTACAACCTCCTGTCCTTGATGGGGAGAAACCACACAAGTCAGTCAACACCCTTAAGGTTTGCTTGTGGCGTGAATGCAAAGATCCGTGATGCTATTCCTAAGCTGATTGCTTTGATACAGTTCCAAAGCCTGTCACTTCCAGATCCAGTTCTTGATACTCCCGCGGGAGCGATGGTACTATCGAATTGCATCTCCTTATGCCGTGGTGTTTGGGGGATCATGGGCTTCCTATGCTCTGAGAATATGAAGGAGAAGGACGAGCACCGGATGCTTCAGGTTCATGCTTTTGATGATCTGAACTACTCTGCCCAAGACAGGATTACCAGGATGAAAGAACAGACAATGCCATCATCCCTATCTGACCCCATTTATCTGTTGCCCACAGCAATCAGGAACCTGCTGTATTTGGACCTCTCAAATTGCAGTGACATTCACAACACCGATATCAAATATTTTCCTTATTCCTTCACTGATCTTAGAAGACATCCATACCAGTCAATATGGTGGAAAAACAACCGGGTACATACCCAATGCAACCTAAAGTCCTATAGGTGTCTCCAGCAAATTATAATTAACAGGTTACTGTCAGATGGTTTTGATGAGGGTGACATTACCAGTGAGCAGAGTCTCACATCTATTTGTATATTTGGTGAAAGCGGCACAGGGAAGACTGAGTTACTCCATGAAATTTATAATGATCAAATGATTATAGAGGGTTTTCATCTGAGGATATGGATAAATATGTGTGACGAAAAGAGGCTATTGGAGAAGATCATAGAGTTTACAACTTGTGCCTATTGCTATGATGCCCCATCAAGCATTCTTGAAGAAACTGTAAGAGAAGAGCTTAATGGTAAGAGATTCTTACTTGTACTGAATGATGCTGATATTGAAAAGCAATGTTTCTGGACAGATGTATGGAAACTAGCAAATGTTGGTGCCGCAGGAAGTGCTCTTATTGTAACTACAAGGAGCGAAGAAGTGGCTAGCCTATTTGGAGCAATGAGAACCTATGACATGAATTCCCTATCTAAAGAAGAATGCTTTATGGTCTTCCAGGAACATGCCGGTTGTGGTTTGGATATTAATAATTACCATGAGTTAACAAAAGTTGGCTGGAAGATTGTTGAGAAATGTGGTAGTAATCCACTGTGTATCAAGGCTCTAAGTGGGTTATTATGTCATTCTGAAACTGCTTTGTCTGAAATCGATTCTCTTGCTGGCGGTATCGTACCAGCACTTAGACTCTGTTACGATCTTCTGCCATCACATCTGAAGCAGTGCTTCAAATTCTGTTCCTTGTTTCCAAAAGACTATGTTTTCGTCAGGCATCACATCATCCAATTATGGATCTCTCAAGGTTTTGTATACCCTGAAGAAGGTAGTCAACCAGAAGACACTGGTCTGCAGTATTTTAATGAGTTGTTCTGCAGATCATTTTTTCAACACTGCCCCTTTAGTAATGATCATGGAGACAAATTTGTTATGCATGAGTTATTTCATGATTTGGCACGTTCCGTTTCGAAGGATGAAAGCCTCAGTTCAGAGGATCCATTTTTCAGCCTTCCTGAAAATATTTGCCACCTTTCACTTGTTATTTCAGATTCCAATACTGTTGTGTTGACCAAAGAACATAGACATCTGCAGTCCCTTATGGTTGTCAGGAGATCTGCATCAGAATACTCAAGTTCGTTTGTGCCACTTTTGAAAATATTGGGTTTGAATGATCTTCTAATGAAATGTGGATTTTTAAGAGCATTGAATTTGAGCTGTACAACAATATTAGACCTGCCTGGTTCTATTGGGTGGATGAAACACTTAAGATTCCTGGCTATGAACAACACAAAGATCAAGAGTCTCCCAACTGAAATAGGTCAGTTGAACGCCCTTCAGACATTGGAACTCAAGGATTGTTGCTGCCTCATTGAGTTACCGGAAAGCACGAAGAATTTGACAAAGCTGCGACACCTTGATGTTCAAAAGGAACCAGGAAATATTCATGTTAGCATGCCTTCTGGGCTCGGGCAGCTAACTGATCTACAAACACTAACGGTATTTAATATTGGGGATGATTTATCACATTGTTCAATTCGGGACTTGAAGAATCTCAGTGGACTAAGGGGACATGTTCATATAACAGGGCTTCAAAATATTACTGCAGCCTTGTCAGAATTTCCATCACTCAAGTCACTGAAGATTGAAGGCTTTCAGAAGCTCAAGTCTGTCAGCTTCTGCCCTGAGATGCCAATGTTACAAAAATTGGAGATAAGTGATTGCAAAGAGTTAGTATCAATAGATGCTCCTTTGTTGTCTGTTTCAAATTTAAAAGTTGTCAGGTGCCCAAAACTTCATTTTGGAGGCAGTTGGCTCGAAGGCTGTCTCATGTGGGAAGAGTTTAAAAGGGATAAGTGCACAATAAAATATCTTCTTGTGAAGACTATGAAAGATGATGGCTGGAACTGGAGAAAGTACGGTCAGAAAGATATACTTGGTTCCAAGTACCAAAGGTGA
Protein Sequence:
- >KN539757.1_FGP003|Oryza_longistaminata|B3|KN539757.1_FGP003
MEPGSSSREGEQQEPANERLTATGGGGGGSPVSDQELSDGEEVSDGEYQAGDDCSGYAVRGRGFVEKEHMFDKVVTPSDVGNLGRLVIPRQHAERYFPRDVDKRSVVLLFEDGAGKPWRFLYSYCGSSQSYVFTLGWSHFFRENRLNAGDTVSFYRGATEATRDRLFIDSKRQMHHINRLFQLLVRVRTMVSSFGEAGSPPPPNSPLPTAQNFTYKALKDCLQDLLYYNLLSLMGRNHTSQSTPLRFACGVNAKIRDAIPKLIALIQFQSLSLPDPVLDTPAGAMVLSNCISLCRGVWGIMGFLCSENMKEKDEHRMLQVHAFDDLNYSAQDRITRMKEQTMPSSLSDPIYLLPTAIRNLLYLDLSNCSDIHNTDIKYFPYSFTDLRRHPYQSIWWKNNRVHTQCNLKSYRCLQQIIINRLLSDGFDEGDITSEQSLTSICIFGESGTGKTELLHEIYNDQMIIEGFHLRIWINMCDEKRLLEKIIEFTTCAYCYDAPSSILEETVREELNGKRFLLVLNDADIEKQCFWTDVWKLANVGAAGSALIVTTRSEEVASLFGAMRTYDMNSLSKEECFMVFQEHAGCGLDINNYHELTKVGWKIVEKCGSNPLCIKALSGLLCHSETALSEIDSLAGGIVPALRLCYDLLPSHLKQCFKFCSLFPKDYVFVRHHIIQLWISQGFVYPEEGSQPEDTGLQYFNELFCRSFFQHCPFSNDHGDKFVMHELFHDLARSVSKDESLSSEDPFFSLPENICHLSLVISDSNTVVLTKEHRHLQSLMVVRRSASEYSSSFVPLLKILGLNDLLMKCGFLRALNLSCTTILDLPGSIGWMKHLRFLAMNNTKIKSLPTEIGQLNALQTLELKDCCCLIELPESTKNLTKLRHLDVQKEPGNIHVSMPSGLGQLTDLQTLTVFNIGDDLSHCSIRDLKNLSGLRGHVHITGLQNITAALSEFPSLKSLKIEGFQKLKSVSFCPEMPMLQKLEISDCKELVSIDAPLLSVSNLKVVRCPKLHFGGSWLEGCLMWEEFKRDKCTIKYLLVKTMKDDGWNWRKYGQKDILGSKYQR