Information report for GSVIVT01031853001
Gene Details
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Functional Annotation
- Refseq: XP_019074538.1 — PREDICTED: putative B3 domain-containing protein At5g66980 isoform X5
- TrEMBL: F6HQF8 — F6HQF8_VITVI; Uncharacterized protein
- STRING: VIT_03s0063g01460.t01 — (Vitis vinifera)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0016021 — Cellular Component — integral component of membrane
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >GSVIVT01031853001|Vitis_vinifera|B3|GSVIVT01031853001
ATGAAAATATCATACACAGCTGAAAATGGGTTTTTGATTTTTGGTTTGGGGGAAATAGACTTAGTAAGGATACGGAACATGAAAAATAGGACGAGACTCAAAAACCAAATCATGGTATCCAAACAGCCCTGTAATATGGGCCTTCAACACCAAAAAAGCGGTGGCCATGAATTCAGCTGGGATAGACTGCAAATCCCAACAGCTTTCGTAAAACACTTTAATGGCTTTGTCCCTGAAAAGGCCATCCTCAGAGATTCTGTTGGGAGAGTTTGGCATGTGGAGGTAGGCCAAATTGGAAAGAATGTGTATTTTCTGAAAGGTTGGCAGCAGTTTCTTACAGATAATCTAGTGGAAGAGGGCGACCTTTTTGTTTTCCAATATGATGGCAGTTATATATTTGATTTTAAATTATATGGGACAACTGGGTGTCAAAAGAAAGACTCTGAGGTTAATGTGGATGTCAACAAAAAGAAATTTTTTGTGAAGGGGGAGGAGGATGTTGAAGAAGTAGAAAGAAATGAAGAAGAAGAGGAGGAAGAAGAAGAGGAAGAAGAACCACAATCAAAATCTTCTAACAAGGGAGTGGTTGTATTCAAGCGTAAATATTCTGGCAGAGGTGGGTACAAACAAACTGCCATTAAAAAGACTAGAAGTGCATACAAAGAAACTTCTCATACCAAGAGCAAGTATAAAAAAGCTTGTACTGGCAATGTTGAGGTAGACAATGCTTTAGACTTCAAAAGTATTGTTAAACCTGAAAATCCTTGTTTCATAACAAAAATACGACCAGGAAGGAGGAGTAAATTGTATGTTCCTGTAGACATACTTAAAGACCATAACATTGCATTGCCTCCAAGAGTGTTGCTTTGTGACCCACATGGGAGATCGTGGCCTGGAGATGTTACTATCTGGAAGGATGGTCGGACATGGATTGGCGGGTGGAGAGCTTTCTGCAAGTGGAACCATGTAGGTGAAAATGACTCCTGCATTTGTGAATTTGTACAGGAAAGTGGGTGCCGGGGGGATCTCATTGTTGTTCACATCCATCGACGCATCCCAACAGCTTTTGTAGAGCACTTTAATGGCTTTATGCCTGAAAAGGCCATCCTTAGAGATTTTGTTGGGAGAGTTTGGCATGTGGAGGTAGGCCCAATTGGAAAGAATGTGTACTTTCTGAATGGTTGGCAGCAATTTCTTACAGAGAATTCTGTAGAAGAGGGAGACTTTTTGGTTTTTCGATACGCTGGAAATTGCATATTTGATTTTAAATTGTTGGGGAGAACTGAGTGTGAAAAGAAAGACACTAAGGTGGTTGATATGGATATCTACAAAAAGGATTTTTGTGTGAAGGAGAAGGATGTGGAAGAAGCAGAAGGAGAAGAAGAGGAAGAGGAAGAGGAAGAGAAGGAGGAGGAAGAGGAGGAAGAGGAAGAAGATGAAGAGGAGGAGAAAATGGAGGAAGATGATGAAGAAGAGGAAAGAAAACTACAACCAAAATCTCCTAACATGAAAATGGTTGTAAAGCATAAATATTCTAGCAGAGGCTGCCCAGCAATTGATAGAAAAAATTATTGTGGTTACAAACAAAGTGCTGTAAAAAAGACCAGAGGTGTGTACAAAGAAACTGCCCATACCAAGAGCAACTATAAAAAGGCCTCTTCATCCCAGGCTGAGTATGTTCCAGCGGACATACTTCAAGACTTCAACATTGCATTACCTCCCAGGGTGTTGCTTCGTGACCTGCATGGGAGATCGTGGCCTGGAGATGTTTCTGTCTGGAAGGATGGTCGAACATGGATTGGAGGATGGCAAGCTTTCTGCAAGTCGAACCATTTGGATGAAAATGACTGCTGCATTTATGAATTTGTACTGGAAAATGGCCACCATGGAGATTTCATTGTTCTTCACATTCACCGGGCACAACCCAAGATATCACCCAGAGGGTTTTTTTTGTTGCAGAACGAGATGAGTTCACCACAAGAAGAATGCCCTGAGTTCTTCAAGGTGTGTCTCCCTGAGTGCAGCTCTGACAAACTGCTTATCCCAACTGCTTTCAGAGAGCATTTTAATGGATTTGTGCCTCACAAGGCCATCCTCAGAGATCCTGTTGGGAGAGTTTGGCAAGTGGAGTTAAGCAAAATAGGAAAGGATGTGTACTTTCAGAAGGGTTGGCAGAAATTTGTTACAGATAATTTTGTAGAAATGGAAGATTTTCTTGTTTTCCGATATGATGGTGGTTATATATTTGATTTTAAATTATTTCGAAATACTGGGTGTGAGAAGAAAGGCTCTGAGGAGATCAATGTGGGCATCTACAAAAGGTGTTTTTTTGGGTACAAACAAACTGCCATTAAAAAGAGCAGAGTTGCATCCGAAGAAAGCAACTGCACCAAGAGAAAGTATAAGGAAGCTTCTGCTGTCCAGGTTGAGGAAAACATTGCTTTTGAAATAGAAAGTATTGTTAATCCCCAAAATCCTTATTTCGAAACTAAAGTAAGACCAGCGAGGAGGAGCAAATTGTATGTTCCATTAGATGTGCTAAGAGACCATAATATTAAATTACCTCCAAAGATGACCCTTCGTGACCCTCTTGGGAGATTGTGGATTGGAAAGGTTGCTGTCTGGAAGGATGGTCGGACATGGATTGGGTGGAAACCATTCTGCAAGTGGAACAATGTGGGTGAAAATGACACCTGCATTTGTGAATTTGTACAGGAAAGTGGCCATGAGGGGTATCTCCTTGTTGTTCACATTCTTCGGGCACAGCCTAGCCGGAGGGCACCCAAATGCAAATGCCGAGCTGAAAGTGGTGAAGAGATGGCTGAGCCAATGGGACAATCTTTCTCTAGAAATAAGCTCATCTCATCAGCTTGTCAGCCAACCATCTTGCTATCACCTTATCCAACTTCTCCCATCTCACTTCTTACAAAGTGTCATTTGCTTCCCTCTCATCATCTCTGTACTTCGATATTTGAACAAAGCTCTTCAACCTCATCACATCAGATTGTGGGGAAGATAGCAATGGCAACAGCTTCTGCCACACTTTCCCCCTCCACATTTTCTGCTGCTGCCATTGCGGGCTTAGGCCGCACCTCCCAGAGGAGAAAAACCAATGTACACTTCATAGGGGGACTGAACTCCTTTGATGGACTGAAAGCTTACAACAGTGTGGCCTCTTTAGGCCTTCCTGTTTGTACTGAGCAGTCCTTTGCAAAGATTGTGGGCTCACTGAAATATTCAGGATTGCGGCAATCATGA
Protein Sequence:
- >GSVIVT01031853001|Vitis_vinifera|B3|GSVIVT01031853001
MKISYTAENGFLIFGLGEIDLVRIRNMKNRTRLKNQIMVSKQPCNMGLQHQKSGGHEFSWDRLQIPTAFVKHFNGFVPEKAILRDSVGRVWHVEVGQIGKNVYFLKGWQQFLTDNLVEEGDLFVFQYDGSYIFDFKLYGTTGCQKKDSEVNVDVNKKKFFVKGEEDVEEVERNEEEEEEEEEEEEPQSKSSNKGVVVFKRKYSGRGGYKQTAIKKTRSAYKETSHTKSKYKKACTGNVEVDNALDFKSIVKPENPCFITKIRPGRRSKLYVPVDILKDHNIALPPRVLLCDPHGRSWPGDVTIWKDGRTWIGGWRAFCKWNHVGENDSCICEFVQESGCRGDLIVVHIHRRIPTAFVEHFNGFMPEKAILRDFVGRVWHVEVGPIGKNVYFLNGWQQFLTENSVEEGDFLVFRYAGNCIFDFKLLGRTECEKKDTKVVDMDIYKKDFCVKEKDVEEAEGEEEEEEEEEKEEEEEEEEEDEEEEKMEEDDEEEERKLQPKSPNMKMVVKHKYSSRGCPAIDRKNYCGYKQSAVKKTRGVYKETAHTKSNYKKASSSQAEYVPADILQDFNIALPPRVLLRDLHGRSWPGDVSVWKDGRTWIGGWQAFCKSNHLDENDCCIYEFVLENGHHGDFIVLHIHRAQPKISPRGFFLLQNEMSSPQEECPEFFKVCLPECSSDKLLIPTAFREHFNGFVPHKAILRDPVGRVWQVELSKIGKDVYFQKGWQKFVTDNFVEMEDFLVFRYDGGYIFDFKLFRNTGCEKKGSEEINVGIYKRCFFGYKQTAIKKSRVASEESNCTKRKYKEASAVQVEENIAFEIESIVNPQNPYFETKVRPARRSKLYVPLDVLRDHNIKLPPKMTLRDPLGRLWIGKVAVWKDGRTWIGWKPFCKWNNVGENDTCICEFVQESGHEGYLLVVHILRAQPSRRAPKCKCRAESGEEMAEPMGQSFSRNKLISSACQPTILLSPYPTSPISLLTKCHLLPSHHLCTSIFEQSSSTSSHQIVGKIAMATASATLSPSTFSAAAIAGLGRTSQRRKTNVHFIGGLNSFDGLKAYNSVASLGLPVCTEQSFAKIVGSLKYSGLRQS*