Information report for GSBRNA2T00107676001
Gene Details
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Functional Annotation
- Refseq: XP_013672700.1 — disease resistance protein RRS1-like isoform X1
- TrEMBL: A0A0D3A4E0 — A0A0D3A4E0_BRAOL; Uncharacterized protein
- STRING: Bo1g021600.1 — (Brassica oleracea)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0007165 — Biological Process — signal transduction
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0043531 — Molecular Function — ADP binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >GSBRNA2T00107676001|Brassica_napus|B3|GSBRNA2T00107676001
ATGGACAGACTCCGCGCTCTCCGCCGTCAGGGATTGCGCGATTTTGAGCCGTCACTCCCGCCGCGATTTATGGATAGAATCCTCGACCGTATGAAGAAATCTTTGAATCGGAGTGGGATAAGCCGCCGCCGGCTAGAACGGTGTTCTAGTTCCTTCGCTGAAGATCTCTCAGTCTCGACTTCTTCTTTCGCGACGTTACCTGATAGGACTAGTTTCCGCCTCCTCGCAGCAGGAGGCGATGGCGAATTGGATCGGATTTACAAGTCCCTTGGGGTTTCTGGTCCCGACGATTTGGCGATTTCTTTTGACGCGTGGGAGGCTAGCAAGATGCGTTCCTCCTCTGGTATTGTTAATAGGTTTCAGCCTCAGGCCGATGTTTTGAGTAGTGGTGTTGATTCACTGGATCGGGACAATACTGGTGGTGTGGGCAGGTTCTTCAAGGAGCATGCGAGTGAAAAAGCTAGTGAGAAGGAACATGGCGAGATGAATCTCAATCCCAATTACCACGATGACGTAAGGGAGGATCTCTTTGAGATTTGTTTGACAACGATTGATGTGAGTAACGTAGACCGTCTAGCCGTTAAGGCGAACAAGGACGCTGGTGAATACTTTCTCTTAGCCACCGTCGTTGCAGGCACCGACAGCCTCCTTCGATTTGAGGACGAGGAAGGCAAGACATGGTTGTTTGGGTTCTCATATCTTAACGTCAGTCAATGCTGCGAATTTACCCAAGGCTGGAGCAGCTACGTTGAGGAGAAGCAGCTTAAAGCTGGAGACTTTGTTTCCTTTCAAAGAGATCGTAAGGACAGCAGCAAGCTCTTCATTGGCTGCAGAAAGAGTGACGAGTCTTTTCCAAATCCAACATCACCGGGTGCATCCATCAAGACGGTAGAAATGAGAGAGAGACTCAAGGGAGTTGAAACTCCTTTCCAGCCAAAATTGTCTGAGCATAGCGTTACGGGGTCTGACCCTGTATTAGTCATTTATTGTGGTGACAACCAGGTCTCCGAGGAGATATACCTCATCAGCTACATCTTCAACGAGTTGTGTCGCCGTGGCTTTTCCCCTTTGAGATATGATATGAAAAAGGGCACTGTGACTGAAAATCAGAAACTGCTACACATATCCCGGGTTGGTATTATCATTTTCTCGATGAACTTTGCTCATTTCAGAGAGTGCCTGGATGGATTCGTGGCAGTCATGGATCATTTGAAAGCTAACGAGCTTGTCCTTGTTCCTGTGTTTTTTAAAGTACGTGTTTCAGACGTCAGGGGCCAAAGTGGCTCTTTTGGAAGAGCATTCATACGACTTAGGAATTCAGTCAAGGCTTCCGAAGTTCTGAAATGGAGGGCGGCTATGATCGAATTAACTTCCATCAGTGGATATGCGTATAAGAAGGGGGATGAGGTTATTCTGGCCAAGAATATTGTCAGAGATGTCTGTTTGCCACTCAGTTCCGAAACCAACATGAAGCTAAGAGGAACGAGGCTTTCATTAGAAAGTATATTGTCTCTGCTGAATCGTTCTCAACCCTCATCCCCACAGATTGTTGGACTTTGGGGTATGGCTGGCATAGGGAAGACTACCATCACGAGAGAATTTTTCAGAACACAAGCTGAGCGATATGACGTGTGCTACTTTCTGCCTGACTTTCATCTAATGTGTCAAACAAAAGGGTTGAGTTATTTGCGTGATGATTTCTTCTCGAAAATATTTGGGGCAGAAAAAGTTTTCGTAGACGCATGTGATACAAAACTAAGATTCACAAGGGATAGGTTCCTGGGTAAAAAGGTTTTGATTGTTCTTGATGGTGTGAGTAGTGCCAAAGATGCAGAAATTTTGGTTGGAGGGTTTGGCTGGTTTTCTGGTGGACATACAATCATCTTAACATCTAGGAATAGGCAAGTTCTTGTACAGTGTAACGCCAAAGTGATTTACGAGATCGAGAAGCTATCCAAGCTCGAGTCTCTTCACCTTTGTTGCAAGTTTGCCAGTAAAGAAAATTGTAAAGGAAGAATGTCGTTGACATCGGAGCTTGTGGACTACGCTAGTGGCAATCCTTTGGCTCTGCGAGTCTTAGGTTTGTCTATTCAAAATCAATCTATGAAAGATCAGAAACAACATCTGAGAAGACTGCGTCAACATCCTCCAGTCAAAATTCTGGATGCATTTAAAATAAGTTTTAATGGACGAGATGGTGACGAGAAGAGCATATTTTTGGACCTGGCTTGTTTTTTCAGAGGGGAGGATAGAGATCGTGTGGTGAAAATCCTTGATGATTGCGGTTTTTCTACAGATTTAGGAATCTATGGTCTCATTGATGAGTCTCTCATCAGCCTTTTAGGTAACAAGATAGAAATGCCCAACATTTTCCAAGACGCGGGTCGATTTGTTGTTTGTCAAGAACACGAAGAGCCAGGCAACCGTAGCAGATTGTGGGATTCTAGTGATATTGCTGGTGTCCTGAAAAATAATACAGGAACAGAAGCAGTTGAGGGAATATTTCTGGATGCATCTGGCTTGACATTTGATTTGAGTTCTACTGCATTTGCGAGGATGTATAGACTTAGATTGCTCAAGATCCACTGTCCAACTTCTGTAAATCATTGCAAGGTTTGTCTACCTGAAGGCCTCCATTCTTTGCCTGATGAGCTACGCCTACTCCACTGGGAAAAATATCCTCTTGGATCGTTACCTCGGAACTTCAACCCTAAAAATCTTGTAGAACTGAACATGCCATATAGCAACTTGACAAAAGTATGGAAAGGAACAAAGAATCTTGAGAAGCTAAAGAGGATCATTCTGAGTCACTCTCAACACTTGACTAAATTCCCAAGGCTTTCAAAGGCCAGGAACCTTGAGCATATTGATCTCGAAGGATGTACGAGTCTGGTTAAGGTTAACTCATCTATTCTTCATCATCACAAGCTTACTTTCTTGAGTCTGAGAAACTGTTCTCGTTTGCGAGTTATGCCTACCACTGTTCATCTAAAATCTCTTGAGGTTCTTAATCTATCTGGCTGCTCAGAGCTCGAGAACCTTCAGGATTTCTCATTAAACCTGAAAGAATTATATCTAGCTGGGGCTGCTATTAGAGAACTGCCGTCGTCGATTGGGGATCTCACTAGACTTGTTACATTAGATCTGGAGAATTGTGAAAGTCTTCAGCACCTGCCACCGGGGATAAGTAACTTGAAAGCCATGATGACACTTAAGCTGTCTGGCTGTTCAAATCTGAAGAGCCTTCCAGTTCTTGATGCATTATTTCTCCAAGATTCACAACGTTCTAACACAAGGATAACCATGGAAGAATCTGTGTCCATAAACCTTCACTCTGCTATTCAAGAATCAAGCAGAGAAGCTTTAGAAGAATTCTTACCGGCATTTGAATGTCTGTCGAACAACGGAATACCACAAGAAAGCTGGACATGGGTCACTGTTATTCCGTTCCCCTCACCCATTTTACACTCATTGGCGTCTAGGCTATATGCGCTAGTATCGTTGTTCCTTTGTAATGCTTACCTGGTGGATATACCTGAAGATATATGTTGGCTTGCTTCGGTGATGAGACTAGATCTTGGTGGAAACTCTTTCAGCCAGATTCCTAAAAGCATCAAGGAGTTTCGTAACCTACATAGCCTTAATTTGCGCCATTGCAAAAACCTCAAATCGCTACCTGAGCTTCCTAGAAGTCTAGTAACCTTGAACGCCCATGGCTGTGTGTCTCTCAAATCATTTCCAACGAGTTTCGAGCAGTTCCCAAGGCACTTCACATTCAGTAATTGCTTTAATCTGTCCCCAAAAGTGGTCAGAAAATATATAGGAAAAGCTCTTGATAGCGTTAAAGGCATGGCCAAGAGGATTCTGCAGGCTTCACTAGAACAGGAACACATCAACGCTCCTGCATTCAGCATCTGTATACCTGCCTCTGCAGGCCACCAATCCTCATTTAATTTTCAAGCTGGTTCTTTTGTAAGGAGACAGCTTACTCCCGGCATGTTAAAGACTCTTTCAGGCTTTGCTTTATCAGTAGTGGTTGAATTTTGGGATAATTATAGCAACAATGCTGGTTTTGGCATCAAGTGTATATGCAGGAAGACCAGAACAGACCTCTCACCTAGATTAGAGAGAATTTTCCGTTGTTGGGCTCCAAAGGAACCTATCACCGTTCAAAGGGATCATATGTTTGTTTTTGGGAGTGTGAAAATGCATCATGCAGAAGCTGTTAACCATGATTTCCTGTCTGATTCAGTGACCTTTGAATTCCATCCTGTCAATTCGGAGAACCAGCTTCTAGGTGATAGCTGCACAGTGAAGAGATGTGGAGTCTACTTAATCACCGATGCGACAGGTAATACAACTCTTAGCGCAAAACGTCCTTCTTCTTCCATGGATTCAGGGGGGCTTTCTAGCATGGAGCATGTGGCACCACCATATAAGAGATGTCGATTGAAGGGAGTTATTGAAATTGTTATTTTAAGCTTAAGAAAAAGGAAGCGAGAAATGAGCGTCCCTACAGTCAAAAGCTTTTCTAAGGTAAAAAGTCTGTGCAGATCGTATGTTCGCACTGGAAACTGTGCAGTGGGTCCTAGTTGTTCTTTTGATCATCCTACATGGGTGTTTACTGAGAAACCCAAAAGACTCTCTGCGTCTAAGTCAAACCAAGCAACCTCTGGTAAAGACGCCATTGATACAGAGCAGGAAGAGGAGTACATGCCAAATGTGATACCGCACGTAGTGCAAAACGTCCAGCTTCTTGCATGGATCCAGTGGAGCATGTGGAATGACCATATAAGAGATGCCGATTAA
Protein Sequence:
- >GSBRNA2T00107676001|Brassica_napus|B3|GSBRNA2T00107676001
MDRLRALRRQGLRDFEPSLPPRFMDRILDRMKKSLNRSGISRRRLERCSSSFAEDLSVSTSSFATLPDRTSFRLLAAGGDGELDRIYKSLGVSGPDDLAISFDAWEASKMRSSSGIVNRFQPQADVLSSGVDSLDRDNTGGVGRFFKEHASEKASEKEHGEMNLNPNYHDDVREDLFEICLTTIDVSNVDRLAVKANKDAGEYFLLATVVAGTDSLLRFEDEEGKTWLFGFSYLNVSQCCEFTQGWSSYVEEKQLKAGDFVSFQRDRKDSSKLFIGCRKSDESFPNPTSPGASIKTVEMRERLKGVETPFQPKLSEHSVTGSDPVLVIYCGDNQVSEEIYLISYIFNELCRRGFSPLRYDMKKGTVTENQKLLHISRVGIIIFSMNFAHFRECLDGFVAVMDHLKANELVLVPVFFKVRVSDVRGQSGSFGRAFIRLRNSVKASEVLKWRAAMIELTSISGYAYKKGDEVILAKNIVRDVCLPLSSETNMKLRGTRLSLESILSLLNRSQPSSPQIVGLWGMAGIGKTTITREFFRTQAERYDVCYFLPDFHLMCQTKGLSYLRDDFFSKIFGAEKVFVDACDTKLRFTRDRFLGKKVLIVLDGVSSAKDAEILVGGFGWFSGGHTIILTSRNRQVLVQCNAKVIYEIEKLSKLESLHLCCKFASKENCKGRMSLTSELVDYASGNPLALRVLGLSIQNQSMKDQKQHLRRLRQHPPVKILDAFKISFNGRDGDEKSIFLDLACFFRGEDRDRVVKILDDCGFSTDLGIYGLIDESLISLLGNKIEMPNIFQDAGRFVVCQEHEEPGNRSRLWDSSDIAGVLKNNTGTEAVEGIFLDASGLTFDLSSTAFARMYRLRLLKIHCPTSVNHCKVCLPEGLHSLPDELRLLHWEKYPLGSLPRNFNPKNLVELNMPYSNLTKVWKGTKNLEKLKRIILSHSQHLTKFPRLSKARNLEHIDLEGCTSLVKVNSSILHHHKLTFLSLRNCSRLRVMPTTVHLKSLEVLNLSGCSELENLQDFSLNLKELYLAGAAIRELPSSIGDLTRLVTLDLENCESLQHLPPGISNLKAMMTLKLSGCSNLKSLPVLDALFLQDSQRSNTRITMEESVSINLHSAIQESSREALEEFLPAFECLSNNGIPQESWTWVTVIPFPSPILHSLASRLYALVSLFLCNAYLVDIPEDICWLASVMRLDLGGNSFSQIPKSIKEFRNLHSLNLRHCKNLKSLPELPRSLVTLNAHGCVSLKSFPTSFEQFPRHFTFSNCFNLSPKVVRKYIGKALDSVKGMAKRILQASLEQEHINAPAFSICIPASAGHQSSFNFQAGSFVRRQLTPGMLKTLSGFALSVVVEFWDNYSNNAGFGIKCICRKTRTDLSPRLERIFRCWAPKEPITVQRDHMFVFGSVKMHHAEAVNHDFLSDSVTFEFHPVNSENQLLGDSCTVKRCGVYLITDATGNTTLSAKRPSSSMDSGGLSSMEHVAPPYKRCRLKGVIEIVILSLRKRKREMSVPTVKSFSKVKSLCRSYVRTGNCAVGPSCSFDHPTWVFTEKPKRLSASKSNQATSGKDAIDTEQEEEYMPNVIPHVVQNVQLLAWIQWSMWNDHIRDAD*