Information report for GRMZM2G344521_P02
Gene Details
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Functional Annotation
- Refseq: XP_008665132.1 — uncharacterized protein LOC103643733 isoform X2
- TrEMBL: A0A1D6KXR4 — A0A1D6KXR4_MAIZE; B3 domain-containing protein
- TrEMBL: A0A317Y5E7 — A0A317Y5E7_MAIZE; B3 domain-containing protein
- STRING: GRMZM2G344521_P02 — (Zea mays)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >GRMZM2G344521_P02|Zea_mays|B3|GRMZM2G344521_P02
ATGAACACTGTGTGTGAAGTTTGTGGGGATATTGGTTACAGACAACTTCTGCTTTGTTGCAGAGACTGCAAGCGTTGTGCTGTGCACCAATACTGTTTGGACAAAGTTGTCTACGAGGCATCATTAATAAAATGGTTCTGTTATGAATGCCTACAAAGGCGTGGTGAAGTTACTCGCATCAGTTCTCTAGAGAAGTTGTCAAGTGAAAGACCACTAAGTCAGGTCCATTCTCGTTCTCCAGTACAGCAGCTAATTACCAAGAGTGTAGAGTCAGTAAGGGATGCAGGGCCTTGGAGAGATCGGAAAAATGAATCAATTGCGACTAAATATCCATCTCTCAACAGAACATATCCTTCAATTAAGAAGCACACTAAAAAGAAGCCGATTGTGAAACCAATGGGTAACTGCACAAATAGAAAAGTGCGAATGGCTAAAGTTACCACCCATACAAGTGCCGAAGCGTCACGTTCTTGTGAAACCATTGGGACAGAATCATCTAAGAGCAACCATGGGAAGAACCAGCAGGTGGACCATGCAAACCCTGTCGCATTGAACACTGAGCAGTCTTTCCCTTTGATTGTGAATAGCTTGGGTACATTGGGAGATAATCACCAGTATCACCTCTTAGAAACAACAGAAGGGTTGGCTTGCAAATTCAAGAAAGTTCCACAATCACTCGCAGCACCATTGAAAAGATTAGAGAAGAGAGACAATGTGGTTTTGGGATCAAATAATTTAGGGTCATCTTGTTTCACAGCTGACCTTGGAAGCTCGGTTCTTGGAAAAAGTGGAGACAAATCGAATAGAATGAAGGATATTGGTGCAAACTTGTCTTCCAAACACAATGATCATGGCAATCAGGCAAATCAACACACTTTAGTTGGCTCGAAGAACATGGAAGGCAAGTCTGTAAAGGCTAAACATACTGTGGTTGATGCACATAAAAACACGTCTTGGACAGTGGACTCACTGATAAACGTCAAGGACAAGTCTGAAGTATATGGTGATAGTAATAGGGATATCTTAAATGATGTCACAGTCCAGCTGGATCATAGGGCTAGCAATGAGTTGCTGCCGAGAAGCACGGCCACCAATATACCACAGCTAGCCACTCTGGAAAACGATGTTGTGGACACAGTCATGCCATATTCACCCAATGGTGGTTGTGAGGAATCATTTTCCTGCCCTGGCATAAAAAACACCCCAAGTGTTCGAGAAAGAAGTGTAGATCCCATTAATATTTCAAGTGATTCTCATGATACCATAGAAGCATCCGAAAGCAGTGAAAGATTCATGGAATGCCAAAAAGCTAGCTTGTGTCGTCGCAGGAAAACTGTGAAGATGGCTATGGTGTCCTCATCATCTGAGGAGTCAGGAGAAGACACTATCTCTGAAAACGTATCTTTGGGGTATGTTTTGGCATGTAGAAGTTCTCTATCTAAAGCACAAAAGAAGAGAGTAACGAAGCTTATTCAGGAAATTCAACCTGAATTCACAGTTTTTATATCAATAATGCGGATGAGCAATGTGAAACTCCCAGGTCCTCTTCTGGGAATTACCAAGGAATATGCAATTGCACATTTCCCAGATAAAACCACAAATGTCACTCTTGAGACGCCTGGCAAGAGCAAGAAGTGGCATCCCAAATTCTACAAAAGAGATGAAAGTAGAAAGAACTTGCTTATGGGACAATGGCTAGACTTTGTCCGTGACAATCATGTGCAGGAGGGAGATATCTGCCTCTTTTTACCGACAAAAGATGAGATAAGACACACATTTATGGTCTATATTCTTCATGAAACAACCCATTCTAGATGTGGGGCTGGCTTTCAAAGGGTTGGCCCATGCCTTGGTGGTGCATCCAGTGCAAAGATGGCTTCAGAAGTTCATATTGAGGATGAACCAACCGCTGGAGAACATGTTTCGTCGGACAGTGATATGCCAGAAAATTCTCATGAACCTCTGGAGAGCGGAGACTCGGATGATCCATTTGAACCTCCATACTTTGTACCATGCAGGAGTCCTCTATCTAAATCCCAAAAGAGAATGGTTGAGCAGCGAGTGCGAGCTATCCGATCTGAAGTTCCCATTTGTGTGGCAGTAATGAAGAACAATAACGTTGGCATTGCTCAGCGTTGGATGCTAGAATTATGTTCACGATATGCTTCGGTATATCTCCCAACTAAAGGGCAAAACATATTGCTCCAGTGCAAGGGGAAGACGTGGGAAGCCAAAATGATGTTTCATAATGGCAGAAGGTGGTTTCTTAATGGAGGTTGGCCCGATTTTGCTCGTGGCAATGGCCTGCGCGTCGGTGACATGTGTCTATTCGAACTGAAGAAGAAAAAGAGTACGCTTACCATGGCAGTCCATATCATTCGCAAGGAGCAGTTTTAG
Protein Sequence:
- >GRMZM2G344521_P02|Zea_mays|B3|GRMZM2G344521_P02
MNTVCEVCGDIGYRQLLLCCRDCKRCAVHQYCLDKVVYEASLIKWFCYECLQRRGEVTRISSLEKLSSERPLSQVHSRSPVQQLITKSVESVRDAGPWRDRKNESIATKYPSLNRTYPSIKKHTKKKPIVKPMGNCTNRKVRMAKVTTHTSAEASRSCETIGTESSKSNHGKNQQVDHANPVALNTEQSFPLIVNSLGTLGDNHQYHLLETTEGLACKFKKVPQSLAAPLKRLEKRDNVVLGSNNLGSSCFTADLGSSVLGKSGDKSNRMKDIGANLSSKHNDHGNQANQHTLVGSKNMEGKSVKAKHTVVDAHKNTSWTVDSLINVKDKSEVYGDSNRDILNDVTVQLDHRASNELLPRSTATNIPQLATLENDVVDTVMPYSPNGGCEESFSCPGIKNTPSVRERSVDPINISSDSHDTIEASESSERFMECQKASLCRRRKTVKMAMVSSSSEESGEDTISENVSLGYVLACRSSLSKAQKKRVTKLIQEIQPEFTVFISIMRMSNVKLPGPLLGITKEYAIAHFPDKTTNVTLETPGKSKKWHPKFYKRDESRKNLLMGQWLDFVRDNHVQEGDICLFLPTKDEIRHTFMVYILHETTHSRCGAGFQRVGPCLGGASSAKMASEVHIEDEPTAGEHVSSDSDMPENSHEPLESGDSDDPFEPPYFVPCRSPLSKSQKRMVEQRVRAIRSEVPICVAVMKNNNVGIAQRWMLELCSRYASVYLPTKGQNILLQCKGKTWEAKMMFHNGRRWFLNGGWPDFARGNGLRVGDMCLFELKKKKSTLTMAVHIIRKEQF