Gene Details:

  • Gene ID: Glyma.19G261300.5.p
  • Gene Name: GLYMA_19G261300, LOC100812161
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Glycine max
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_003553806.1  — B3 domain-containing transcription factor NGA1
  • Refseq:  XP_006604926.1  — B3 domain-containing transcription factor NGA1
  • Refseq:  XP_014627638.1  — B3 domain-containing transcription factor NGA1
  • Refseq:  XP_014627639.1  — B3 domain-containing transcription factor NGA1
  • Refseq:  XP_028219137.1  — B3 domain-containing transcription factor NGA1-like isoform X1
  • Refseq:  XP_028219138.1  — B3 domain-containing transcription factor NGA1-like isoform X1
  • Refseq:  XP_028219139.1  — B3 domain-containing transcription factor NGA1-like isoform X1
  • Refseq:  XP_028219140.1  — B3 domain-containing transcription factor NGA1-like isoform X1
  • Swissprot:  O82799  — NGA1_ARATH; B3 domain-containing transcription factor NGA1
  • TrEMBL:  A0A0B2PV20  — A0A0B2PV20_GLYSO; B3 domain-containing transcription factor NGA1
  • TrEMBL:  I1NCS4  — I1NCS4_SOYBN; Uncharacterized protein
  • STRING:  GLYMA19G45090.1  — (Glycine max)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0009908  — Biological Process — flower development
  • GO:0048366  — Biological Process — leaf development
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >Glyma.19G261300.5.p|Glycine_max|B3|Glyma.19G261300.5.p
    ATGGAGTTGATGCAACAAGTTAAAGGTAACTATTCTGATAGCAGGGAGGAAGAGGAGGCTGCAGCAGAGATTATCACAATCACAAGGGAACCAGAAAGCAGCAGGTTACACCAACAAGATGCAGCATCCAATTTTGGAAAGAAGCTAGACCTGATGGACTTGTCACTAGGGAGCAGCAAGGAAGAGGAAGAAGGGAAGTTGCAACAAGGAGGTGGAGGTGGAGGAGTGGTTCATCATGCTCATGAAATAGTGGAGAAAGAGAATATGTTTGAGAAAGTGGTGACACCGAGCGACGTAGGGAAGCTGAACAGGCTGGTGATACCGAAGCAGCACGCGGAGAAGTACTTCCCCCTTGACTCCTCATCCAACGAGAAGGGTCTGCTCCTGAATTTCGAGGACCGGAATGGGAAGGTGTGGCGGTTCAGGTATTCCTACTGGAACAGCAGCCAGAGCTATGTGATGACTAAGGGGTGGAGCCGTTTCGTGAAGGAGAAGAAGCTGGATGCCGGTGACATTGTCTCCTTCCAGCGTGGCCTTGGGGATTTGTATAGACATAGATTGTACATAGATTGGAGGAAAAGGTCTGCTCATCCTCATGCTCATCATCATGCCCCTGATCCTTTGTTTCTTCCCTCTATCAGATGGTACTCTCTCCCTCCCACCATGCCACCTCGCTACCACCACGATCATCACTTTCACCACCATCTCAATTACAACAATCTCTTCACTTTCCAGCAACACCAGTACCAGCTTGGTGCTGCCACAGCCGCTGCCACTGCTGCTCATCATGGTGACCAGAATTCGGGATCTGGGTCACTCTATTACCTAAGGTCCTCCATGTCAATGGGTGGCGGTGATCAAAACTTGCAAGGACGAGGGAACAACATTGTCCCCATGATCATTGATTCTGTGCCGGTTAGCGTTGGCCATCACAACAATCGCCATGGGAATGGGGGCATCACGAGTGGTGGTGCTACTAGTAGTGGAAAAAGACTAAGGCTATTTGGGGTGAACATGGAATGTGCTTCTTCGGCAGAAGATTCCAAAGGCTTGTCCTCGGGTTCGGCAGCACATGTGACGACAGCTGCTTCTTCTTCTCTTCATCAGCGCTTGAGGTTGCCACTGCCACATGAAGACCCACTTTCGTCGTCGTCAGCGAGGTTTGGGGATCACAAAGGGGGCAGTACTGGGACTTCGCTGCTGTTTGATTTGGATCCCTCTTTGCAGTATCATCGGCAGTGA
Protein Sequence:
  • >Glyma.19G261300.5.p|Glycine_max|B3|Glyma.19G261300.5.p
    MELMQQVKGNYSDSREEEEAAAEIITITREPESSRLHQQDAASNFGKKLDLMDLSLGSSKEEEEGKLQQGGGGGGVVHHAHEIVEKENMFEKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKVWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGDLYRHRLYIDWRKRSAHPHAHHHAPDPLFLPSIRWYSLPPTMPPRYHHDHHFHHHLNYNNLFTFQQHQYQLGAATAAATAAHHGDQNSGSGSLYYLRSSMSMGGGDQNLQGRGNNIVPMIIDSVPVSVGHHNNRHGNGGITSGGATSSGKRLRLFGVNMECASSAEDSKGLSSGSAAHVTTAASSSLHQRLRLPLPHEDPLSSSSARFGDHKGGSTGTSLLFDLDPSLQYHRQ*