Information report for Gh_A12G0630
Gene Details
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Functional Annotation
- Refseq: XP_017637007.1 — PREDICTED: B3 domain-containing protein LOC_Os12g40080-like isoform X2
- TrEMBL: A0A0B0PB32 — A0A0B0PB32_GOSAR; B3 domain-containing transcription factor VRN1-like protein
- STRING: Gorai.013G245600.1 — (Gossypium raimondii)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Gh_A12G0630|Gossypium_hirsutum|B3|Gh_A12G0630
ATGATTGAACATACTCTTCAACAGGCTTCCACAATGTTTACGTCCAAAACTCCCCATTTTTTCAAAGTAATTCTTCAGGAAACTTTGAGAGATGGGATACTGGGGATTCCTAGAAAGTTTGTGAGAAAATACGGAAACCAACTGTCAAGCCCTGTTAAGCTTGAGGTGCCTAGTGGTGCAATATGGCAGGTGGAACTGGCAAAGACTGATGAAAGGGTGAGGTTGCAAAACGGCTGGCGAGAATTTGCAGAGCATTACTCGCTTGAACTTGGGTCTTTTGTGGTCTTCAGATATGAAGGGAATGACCATTTCCATGTCCTAATTTTTGATAAAAGCGCTTCGGAGACCGAATATCCCCACACTAGCACTGAAGGTAACGATGGTGATGATCATGTGTCCGTTGAGATTTGTGATGATGTTTCAGCCAGTAGGAAAAACAAAGAGAAACCAGATTTGCCATGTTCACTCCCTCAAAAGAAAATAAGTACTGATTCAAAGTTAAAGAATTCATCTTCACACATTAGCCTTGATGAACCCTGCTCTATAAAGAATAAGCTTCGAAATCTCAAGAAAAATGAAAACTCAAGTAGTTCTACAGGACGTGTAGATGCTCAAAGGAGCATAGGCAATACAGATGGAACCAGGAGCTTGGTAAGTGATACTAATTCTAGTTCTCAAGAAAGATGTCCCTCCGGCTCTACAGAACTTAAAGACTCAAAGTTCCAAAAACGAAAGAAGCGTGTGGATTCCCAATATTCAAAAAAAGATCTTAGGGATGAATTCATATGTTCAGCAAAACATGATAATGGAGGGGTATCAGGTGCTTGTGGATGTCTGAAACCTGACCTTATAGGCAGGACGCAACCATTGGCTGCAACTGAGAAACAAAGAGCTGCTGATATTGTAAGTTGGTCTTCCTCAAGATTAGTGAGTAGGAAAAGTAAAGAGAAATCACATTTACCATGTCCTCTGCCTCAGAAGAAAATGAGAATCGATTCTTCTAATCAACATGGACAAAATTCGAAGTTAGAGGTTTTATCTTCTGGCACTAGCCCTGATGCTCAAAGAAGTGTGAAAACTAAGGCTTTCAGTTGTGTGCAACGGCTGGCAGCCATTGAAAAGGCGCACGCTGTTCAGATAGCTAGTGCTTTTGAAAGTACTGAAAACCCAGTTTTTATGATAGTCATGCAACCATCATACGTTCGTGGTACATGCAGAATGTTTATACCATCGGACTTTGCTAGGAAATTTTTGACAGTGCACAAGTCTAATCTGACCTTGTGCAATTCCACTGGGAAAACTTGGCATGCCAAGTTATACCATCCAGCAAATAAAAAGCCCAACGCACACCTCTGCGGTGGGTGGCGTGAATTTGTGGAAGATAATCATCTTAATGTTGGTGACATTTGTGTTTTCGAGCTAATTAAGCACCCTGAAATCTTAATGAAAGTGCAAATCTATCCGGTTGTCAAAAATGCAAGCAAGGCCAGCGGGCAACAAGCTCTCGGGAGCATAGTCAGTCGAGTTAAAACTAGGAGCTTGGTCAGTGATGCTGAACCTAATTGTCAACAAAGTCCATCCAGCTCCAGTGAATCTAAAGACCTAACAGACTCGCACATCAAAACCTTGCATGACTCTCCACTAGACCAGAAAACAAAGAAGAAATTGACACGCTCGAGTGCTCAGCCTTGTAAGATGACGAGAACCAGCCTAAGTGGAAGCATTCAGGCTAAGGGGATTAAGCACGAGAAAGGAAAGAGCTTGAATTTCCAATATTCAACAGAAGAACTTGGAGGTGGACTCAAAAATTCTGCAAAAGGTGATAGTGGAAGGAAGTCAGGTGCTCGGAGATGTCTGAAACCTGATCCTGTATACCAGAAACAAAGAGCTTGTACAGGAGGTGGTGCTTTTAGAACTTCAAACCCCTCTTTCAGTGTTGTGATACACCCATCACATATTGGTTCTTGTAGTACTGTGCACATACCGGAGGAATTTGGCAAGAGATATTTGAAGAAAAACGGAGAAATGATGCTGAGAGTTGCAGATGGGAGGAGTTGGAATGTTGAGTATGAAAGAATAGGAAGGAATAAAGGTAGAAAAGCAGGGTTTGGGGGTAAGAGTTGGGGACAATTTGCTATGGACAATGAATTGGAGGTGGGAGACGTTTGTGTGTTTGAGCTGATGAATGAAAATGGAAACTTGTTGGAAGTTGTCATTCATCGCAAGCTTTTACTCGTCGAAATTAATTAA
Protein Sequence:
- >Gh_A12G0630|Gossypium_hirsutum|B3|Gh_A12G0630
MIEHTLQQASTMFTSKTPHFFKVILQETLRDGILGIPRKFVRKYGNQLSSPVKLEVPSGAIWQVELAKTDERVRLQNGWREFAEHYSLELGSFVVFRYEGNDHFHVLIFDKSASETEYPHTSTEGNDGDDHVSVEICDDVSASRKNKEKPDLPCSLPQKKISTDSKLKNSSSHISLDEPCSIKNKLRNLKKNENSSSSTGRVDAQRSIGNTDGTRSLVSDTNSSSQERCPSGSTELKDSKFQKRKKRVDSQYSKKDLRDEFICSAKHDNGGVSGACGCLKPDLIGRTQPLAATEKQRAADIVSWSSSRLVSRKSKEKSHLPCPLPQKKMRIDSSNQHGQNSKLEVLSSGTSPDAQRSVKTKAFSCVQRLAAIEKAHAVQIASAFESTENPVFMIVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLYHPANKKPNAHLCGGWREFVEDNHLNVGDICVFELIKHPEILMKVQIYPVVKNASKASGQQALGSIVSRVKTRSLVSDAEPNCQQSPSSSSESKDLTDSHIKTLHDSPLDQKTKKKLTRSSAQPCKMTRTSLSGSIQAKGIKHEKGKSLNFQYSTEELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKQRACTGGGAFRTSNPSFSVVIHPSHIGSCSTVHIPEEFGKRYLKKNGEMMLRVADGRSWNVEYERIGRNKGRKAGFGGKSWGQFAMDNELEVGDVCVFELMNENGNLLEVVIHRKLLLVEIN