Information report for Gh_A10G0200
Gene Details
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Functional Annotation
- Refseq: XP_016711287.1 — PREDICTED: B3 domain-containing protein Os07g0563300 isoform X2
- Swissprot: Q0D5G4 — Y7633_ORYSJ; B3 domain-containing protein Os07g0563300
- TrEMBL: A0A1U8L9K6 — A0A1U8L9K6_GOSHI; B3 domain-containing protein Os07g0563300 isoform X2
- STRING: Gorai.011G022400.1 — (Gossypium raimondii)
- GO:0003677 — Molecular Function — DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g002739m, orange1.1g002554m, orange1.1g002489m, orange1.1g003324m, orange1.1g003322m, orange1.1g002626m
- Cucumis sativus: Cucsa.045980.2, Cucsa.045980.1
- Gossypium arboreum: Cotton_A_03847_BGI-A2_v1.0, Cotton_A_25584_BGI-A2_v1.0
- Juglans regia: WALNUT_00027247-RA
- Malus domestica: MDP0000274788
- Manihot esculenta: Manes.17G039700.1.p, Manes.16G021300.1.p
- Populus trichocarpa: Potri.004G035300.1
- Prunus mume: XP_008224939.1
- Prunus persica: Prupe.4G036100.1.p
- Pyrus bretschneideri: Pbr000285.1
- Ziziphus jujuba: XP_015887956.1
Sequences
CDS Sequence:
- >Gh_A10G0200|Gossypium_hirsutum|B3|Gh_A10G0200
ATGACGTCGACTTCGGTAGCAACTTCGTCTTCTAGGATTTGCTTCAATTCAGTCTGTAACGATTTGAAATCGGAAAGACCGAGGAAAGGATGGCGGTTGCGAACGGGAGAGTTGGCTGAGCTCTGTGATCGATGCGCTTCTATTTACGATGAGGGAAGATTTTGCGATACTTTTCACTTAAATGCTTCTGGTTGGAGAACCTGCGAGTCATGTGGGAAGCGGGTTCATTGCGGATGCATTGTATCAGCATATGCATTTGCTTTGTTGGATGCTGGAGGAATTCTATGCATAGCTTGTTCGAGGAAAAATGCTGTCTTGGGACCAAATTCTTCATGGCCACCTTCTTTGCTTTTCAATTCATCTTTGCCTGAGAGGTTCAAAGATTGTTCTGCTAAAGGTTGGAGTCAGCTAACTGGTTCGGGTCCTGCACCTTGGCGGCAAGCGCCTGGTTTATTCAATTCATCAACTCCTCAGCCTGAGTTGCATTCTAGAGTGCCCTATGAAGTTGACTTATCCACTGGCATTGACAGATTAAATGTCTCAGAAAGATTATCTATTCCTTCCCTTGAAAAGAAGAAAAATGAAGACTTTCCTGAAAGGTTAATGAATGGATCTTTGAAGCCTTCTGCACATGATATACATGAGAATGGAAATACAGGGATCAATTGTGAGGAGCAGCATACTTCTTGTTTGACCAAACCTCAGGACTCATCTAATCCACCATTTGGTTTAGCTGTACCATACACATCTATAGATGAAGCAAATGGTCAAATGGGGGTGTCTGGCACTCCTTTGCGACCAAACCCCCAACCTTCACTTGCCAAGCAATTTCATAGTAATCCACATAATGGACTTGACTCTTCAGGTGAAACTCAGATGCGTAATGGGAGGCCACGACCAGATGGCCGTGGAAGGAATCAGTTATTTCCTCGTTATTGGCCTAGGTTTACCGACCAAGACCTGCAGCAAATATCTGCCGATTCAAATTGTATAATCACTCCTTTGTTTGAGAAAATGTTGAGTGCCAGTGATGCTGGGCGTATTGGACGTTTAGTGCTGCCAAAAAAATGTGCAGAGGCATATTTCCCACCAATATCTCAGCCAGAAGGATTACCGCTGAAAGTCCAGGATTCAAAAGGAAAGGAATGGATATTTCAATTCCGCTTCTGGCCCAACAATAATAGCAGAATGTATGTTTTAGAGGGTGTTACTCCTTGCATACAGAACATGCAATTGCAGGCTGGTGACGTAGTAACATTTAGTCGTCTTGAACCTGGAGGGAAGTTGGTCATGGGTTTCAGAAAGGCTTCAGCTGCTTCAGCATCTGAGCAGGAAAATGAAGCCAAAAATAGTAATGGAGTTTCTACCCATGGAGATGCTGAACTGGCAGATCCCAGCTCCTGGTCAAAAGTTGATAAGTCCGGATACATAGCAAAGGAAGCATTAGGAACCAAAGTAGCAGTTCCCAGAAAGAGGAAGAATAGTGTGCTGGGTTCAAAGAGTAAGCGACTGAGAATTGATAATGAAGACATGATAGAGCTGAAACTAACATGGGAAGAAGCTCAAGGGCTGCTCCGTCCCCCTCCTAATCATGTAGCCAATGTTGTATCGATTGAAGGTTTTGAGTTTGAAGAATATGGGGATGCGCCTGTTTTAGGGAAGCCTACAATATTTGCAACTGATAAGTCGGGGGAAAAGATCCAGTGGGCTCAGTGTGAAGATTGTTTTAAGTGGCGTCGATTGCCTTCCGATGTTCTTCTTCCTTCCAAGTGGACCTGTTCCAGTAACTCATGGGATCCTGAAAGATCATCTTGTTCGGCCACTCAAGAATTGACCGCAGAAGAGCTGGAAAATCTGCTGCCACACTGTAATCCAGCTGCTTCTAAGAAAATGAAGGTTGCTAAACAGGAATCTGAAAATGTAGATGCTTTAGAGGGGTTGGATACTCTTGCCAACCTAGCTATCTTGGGAGAGGGTGGCGTTCTCCCTGCTTCTTCTCAGGCCACGACAAAGCATCCCCGGCATAGACCTGGCTGCTCATGTATCGTATGCATTCAACCCCCGAGTGGGAAAGGCCCCAAACACAAGCAGACATGTACGTGTAATGTCTGCCAAACAGTGAAGAGACGCTTCCGCACCCTAATGCTGCGGCGCGAGAAGAAACAATCGCAAAAAGAAGCAGATGCTACACGCAAGAAGCAGCAGCCTTCATTGCCCGATAAAGTAGTAGACGATGAGCCTCTCCCTTGCACTACTAGTGCAGGAAACAGCAGCCCGAACCAGAAAAAGGTTGTCAGCGAGAATTTGGATGATGATACTAACAGATTAAAATCCTCGAGTTCACCCTTTAAAGGCCAAATTGACTTGAATATCCAGCCGGAGCGAGAAGAAGAGCTCTCACCTGGTTCAGATTCTGGCGGCACAATGAGATTGCTTCAAGATGCCACCGACAAATACCATAGGCAGCAAAGTATTTTGAGCTCTAGTGGCAACAGTAACATAGAAGTTACTCAGACGCAACCTGGAAGCGGAACGGAATTAGAAAAAATCAACAGCAGCATCGATCTTAGAGCCAGTCATCGAGATGCTGACATGGACCATCCAGCAATTTTTCCTATTAAAACGTTTGCACCCACATCAGCCACCGGTTAG
Protein Sequence:
- >Gh_A10G0200|Gossypium_hirsutum|B3|Gh_A10G0200
MTSTSVATSSSRICFNSVCNDLKSERPRKGWRLRTGELAELCDRCASIYDEGRFCDTFHLNASGWRTCESCGKRVHCGCIVSAYAFALLDAGGILCIACSRKNAVLGPNSSWPPSLLFNSSLPERFKDCSAKGWSQLTGSGPAPWRQAPGLFNSSTPQPELHSRVPYEVDLSTGIDRLNVSERLSIPSLEKKKNEDFPERLMNGSLKPSAHDIHENGNTGINCEEQHTSCLTKPQDSSNPPFGLAVPYTSIDEANGQMGVSGTPLRPNPQPSLAKQFHSNPHNGLDSSGETQMRNGRPRPDGRGRNQLFPRYWPRFTDQDLQQISADSNCIITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGDVVTFSRLEPGGKLVMGFRKASAASASEQENEAKNSNGVSTHGDAELADPSSWSKVDKSGYIAKEALGTKVAVPRKRKNSVLGSKSKRLRIDNEDMIELKLTWEEAQGLLRPPPNHVANVVSIEGFEFEEYGDAPVLGKPTIFATDKSGEKIQWAQCEDCFKWRRLPSDVLLPSKWTCSSNSWDPERSSCSATQELTAEELENLLPHCNPAASKKMKVAKQESENVDALEGLDTLANLAILGEGGVLPASSQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCQTVKRRFRTLMLRREKKQSQKEADATRKKQQPSLPDKVVDDEPLPCTTSAGNSSPNQKKVVSENLDDDTNRLKSSSSPFKGQIDLNIQPEREEELSPGSDSGGTMRLLQDATDKYHRQQSILSSSGNSNIEVTQTQPGSGTELEKINSSIDLRASHRDADMDHPAIFPIKTFAPTSATG