Information report for evm.model.supercontig_115.30
Gene Details
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Functional Annotation
- Refseq: XP_021891444.1 — auxin response factor 19-like
- Swissprot: Q0D9R7 — ARFS_ORYSJ; Auxin response factor 19
- TrEMBL: A0A061GQQ5 — A0A061GQQ5_THECC; Auxin response factor
- STRING: evm.model.supercontig_115.30 — (Carica papaya)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >evm.model.supercontig_115.30|Carica_papaya|B3|evm.model.supercontig_115.30
ATGAAGATGCCAGCTAACGGAGCCGGTCCTGTTTCTGCCACTGCCGCACCTAATCCGGCTGAAGAGTCCAAATCTTCCATATTTTTTTTTCTGGTTTCTCGCAAAACAAACAAGAAAATAGAGGGAATGATAGAATCACCAGGACTGACAAATAGGTTTATGACACATGGTGTTGCTGCAGCAGTAGGAGGAGAGAAGAAGAGCATAAACCCGGAGCTATGGCAAGCGTGCGCAGGGCCGCTGGTTAACTTGCCGGCTGCTGGGACCCACGTCGTCTACTTCCCTCAGGGCCACAGTGAACAGGTTGCTGCATCTATGAAGAAGGATGTAGATGCTCAAATCCCAAACTACCCAAATCTTCCGTCTAAGCTTCTCTGTTTGCTTCATAATGTCACCTTGCATGCAGACCTGGAGACGGATGAGGTGTATGCTCAAATGACTCTTCAGCCTGTTCCTTCTTTTGACAAGGATGCTTTATTGAGATCAGATCTTTCACTCAGAACAAATAAGCCACAAACAGAGTTTTTCTGCAAGACATTAACTGCTAGTGATACGAGCACTCATGGAGGTTTTTCTGTGCCACGTCGGGCAGCTGAAAAGATCTTCCCTTCTCTTGATTTCTCTATGACCCCACCTGCTCAAGAACTTGTAGCGAGGGATTTGCATGATAATGTGTGGACATTCCGGCACATATATCGCGGACAACCAAAACGCCACCTGCTTACAACCGGTTGGAGTTTATTTGTTAGTGGAAAGCGACTTTTTGCGGATGATGAATCCTCAGACTTAGAGAATGTATTCAAGAGGAGTATGCCCTGGGATGATCTCTGCGTGAGGGATACCCAAGCTCTGCCTGGCCTGAGCTTGGTACAATGGATGAACATGCAGCAAAACACTTCGCTGGCTAACTCAGTGCAGCAAAACTACATAAATTCCTTGTCTGGATCTGTTCTACAGAACCTTGGTGGAACAGATCTTTCCCGCCAATTGAATTTTTCCACGCCTCAAATCCCTCAGGCGAGCAATTTGCAGTTCAATGCCCAGAGGTTGCCTCAGCAAGCGCAACACTTGGATCAGCTGCCCAAGCTACCATCTACAATGTTACCACTAGGCTCTGTTATGCAGCCACAACAGCAGTTAAGTGATATTACGCAGCAAGCAAGGCAAAATATAATTACTCAAACTCTACCCTCAAGTCAAGTTCAAGCTCAAATCCTGCAACCTCAAACTTTGGTCCAGGGTAATAATATTCTTCAGCAGCAACTATCTAGCCACCAGCTTTCTCGAAACCTTCCCCAGAACATGCAGCCACAGCAGCAGCCGCAACAGCAACAGCAACTGCAACAGCAACAGCAACAGCAACAACAGAATATGGTGGCCCTTAATCAGCAACAGAACTTGACACAACCCCAGCTGAGTGATCAAGTAAACCAGCATTTACAAATGTCTGACAGTCAGATTCAACTTCAGCTGCTGCAGAAGCTTCAGCAGCAGCAGCAAGCAATTTTAGCCCAGCAATCGACATTGCAACAGCCCGCTCAACTTCCCCAACTTCAGGATCCGCAGAGGCAGCTATTGGATGCATCCCAAAGCTACCCTAGGTCCGTGGTACCCAGCCAAATGATGGAAATACCTAATGCAGCAACCACCTCACTTCCTCAGTCGAATGTTATTCCAAACCAGATGACAAAGAGTAATAGCCAAACAAATATTCGGTTCTCCCAAACTCCACAGCAGCTGAAGCTTCAGCAACAACAATCTTCTGGATTTTCTGAATTGCCTGGAAATGTGGGACTTTGCTCAACGGTAACAACCAATCAGCTCTCCATGAATGGCAGCAGTATGATGACAGGAGCTGCAGGAGCTGGGCAGTCTGTGATCACTGATGATGTTCCGTCTTGTTCTACTTCTCCTTCCACAAACAACTGTCCGAATGTCCAGACTCTGGTAAGCAATCGTGCCAGCAAAAACACAACACTGGGGGAGGACATGGCCCAGTCCTCAGCCATGCTATTGAATCCTAATGCCTTGGAAACTGTTTCATCCAATGTGAATATGGTTAAAGACTTGCCACAGAAGTCTGATGTTAAGCCTTCACTGAACATCTCCAAGAGTCAAAGCCAAGGATTTTTAGCTCCGCAAACATATCTTAATGGCAATGCTCCACATATGGATTATTTGGACACGTCATCTTCAACTTCGGTTTGCCTCTCTCAGAATGACATCCATCTACAGACTAATAATAATTCGCTTACTTACAACCCGCAATCAATGTTGATGAGGGACCCTAATCAAGATGGAGAAGTTCAAGCAGATTTAAGGAACAACATTCCATATGGAAGTAATGTTGATGGTCAACTGGCAGTGCCCATGAATCATGATTCTTTATTGACAAAGGGCATAGGAGGATTGGCAAAGGATTTCTCAAACACTCTTTCATCAGGAGGCATGCTTGCCAACTATGAAAGCTCTAAGGATGCTCAGCAGGAGCTTTCCTCATCAATTGTTTCTCAGTCGTTTGGAGTTCCAGATATGACATTTAATTCAATTGACTCCACCATAAATGATGCCAGTTTCTTGAACCGGAGCACATGGGCTCCCCCACCACAATTTCAGAGAATGCGGACATATACCAAGGTGTATAAGCGAGGAGCTGTTGGGAGATCAATTGATATTACCCGTTATTCAGGCTATGATGAGCTTAAGCAGGATCTAGCTCGAAGGTTTGGTATCGAGGGGCAATTGGAAGACCGAGGAAGAATTGGTTGGAAGCTTGTATATGTAGATCATGAGAATGATGTTCTGCTCGTAGGAGATGACCCTTGGGAGGAGTTCGTAAATTGTGTACGTTGCATCAAGATCTTGTCGCCGCAAGAAGTGCAGCAGATGAGCTTGGATGGAGATTTTGGGAACTCAGTCCTTCAAAATCAAGCTTGTAGCAGCTCGGACAACGGGAATGCTTAA
Protein Sequence:
- >evm.model.supercontig_115.30|Carica_papaya|B3|evm.model.supercontig_115.30
MKMPANGAGPVSATAAPNPAEESKSSIFFFLVSRKTNKKIEGMIESPGLTNRFMTHGVAAAVGGEKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLLCLLHNVTLHADLETDEVYAQMTLQPVPSFDKDALLRSDLSLRTNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPSLDFSMTPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFADDESSDLENVFKRSMPWDDLCVRDTQALPGLSLVQWMNMQQNTSLANSVQQNYINSLSGSVLQNLGGTDLSRQLNFSTPQIPQASNLQFNAQRLPQQAQHLDQLPKLPSTMLPLGSVMQPQQQLSDITQQARQNIITQTLPSSQVQAQILQPQTLVQGNNILQQQLSSHQLSRNLPQNMQPQQQPQQQQQLQQQQQQQQQNMVALNQQQNLTQPQLSDQVNQHLQMSDSQIQLQLLQKLQQQQQAILAQQSTLQQPAQLPQLQDPQRQLLDASQSYPRSVVPSQMMEIPNAATTSLPQSNVIPNQMTKSNSQTNIRFSQTPQQLKLQQQQSSGFSELPGNVGLCSTVTTNQLSMNGSSMMTGAAGAGQSVITDDVPSCSTSPSTNNCPNVQTLVSNRASKNTTLGEDMAQSSAMLLNPNALETVSSNVNMVKDLPQKSDVKPSLNISKSQSQGFLAPQTYLNGNAPHMDYLDTSSSTSVCLSQNDIHLQTNNNSLTYNPQSMLMRDPNQDGEVQADLRNNIPYGSNVDGQLAVPMNHDSLLTKGIGGLAKDFSNTLSSGGMLANYESSKDAQQELSSSIVSQSFGVPDMTFNSIDSTINDASFLNRSTWAPPPQFQRMRTYTKVYKRGAVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRGRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVLQNQACSSSDNGNA*