Information report for EMT33420
Gene Details
Functional Annotation
- Refseq: XP_020185957.1 — B3 domain-containing protein Os03g0620400-like
- TrEMBL: N1R5L8 — N1R5L8_AEGTA; B3 domain-containing protein
- STRING: EMT33420 — (Aegilops tauschii)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi4g37946.2.p, Bradi4g37946.3.p, Bradi4g37946.5.p, Bradi4g37946.4.p, Bradi4g37946.1.p, Bradi4g37946.6.p, Bradi4g37946.7.p, Bradi1g14560.17.p, Bradi1g14560.16.p, Bradi1g14560.15.p, Bradi1g14560.13.p, Bradi1g14560.12.p, Bradi1g14560.11.p, Bradi1g14560.5.p, Bradi1g14560.14.p
Sequences
CDS Sequence:
- >EMT33420|Aegilops_tauschii|B3|EMT33420
ATGATTGTTGATGAAGACAATGATGACTTCCCTTTCGGTAGAGTACTAGAACAAGAATGTAGATGGGATCACCTTGAATCGCAAAGTGACAACAACGAAAAACACTCAATAAAGACAAAGGGTTTCGAGTACAAGTCATCCCTTCTTCCGCCCCCATCCTCATCAATCAGCAACATGTCCGCGTCCAACGACAACGATGTCATCAACATGGCGCGCCCACGATCGCGGCTATATCGCCGCCGTCTTCCACAACCACACCCGGCACAACATCGAAGCTCGATGGCTCCTGCCGCCATGAGTGATCCTTGCGACTGCTGCAAGAGTAAGGTGAAGTTCATCAGGCAGATGCGTGGTAACTTCAAAGATAGTGTGGTCATACCACAGCGGCTCATGAACCATTTTGGAGGCGATACCTCTGGAACCATAAAACTAGAATCCCCTAATGCCCAGGTGTATGATGTTGGAGTTGCCAAGAAGGTGAACAGAACGGTCCTCCTGTCTGGATGGGAGGCTTTTGTCGATGCCAATCAGATACAGGAGAACAATTCCTTGATGTTTCGGTACATTGGATTCTCCTGCTTCAAGGTTGCGGTATTTGATTCCAATGGCGAGGAGAGAATCTTGTGCCGTGCCAGGATGGGAAATCCTTCTCATGTTGAAAAGCCAAGCATGCATCGTTCTGTTGTTTTGGCCAGTCCCCTTGATGGTACCACCCAGTCTTCAGATTCAGATGACTGCTACATAACGCCAGGAAAGATACCTGCAGTAAAATATTCTGCTGATGAATTTTCAGGAGAACAAATGGAAGAAATTGAAGCGTTTGTCTCAAAAATTCAATCTGAAATCCCTGTGCTTGTGGTAAAGATGAACAAGACCAATGTGTCCGACTACCCTGATCTGGTAATACATAAGGAGTACGCGGGCGCATACTTTCCGCCCAGAACTCGATTTGTCACACTCAAGGTGCCTGAGAATAGCAAGGGTTGGCAATGCAAATTCTGCATTAGACCTGTTGGCGGGCACAACCTTTATTTGCGTGACTTTGTCCCTGACAATCATGTTCAGGAGGGAGATCTCTGCCTCTTCCAACCAATCACAGAGGTTGAGGCAACAAACTTCGCAATTATGGTCCACCTGCTTTCCAAAGCTGGAAGAGCTGGTATACCCTCAAATCAAGGAGGAGACAATCCACATGAATGTGGATCTATCTGCTTGGATCAACGGGAGACTTCCTCCAAGCTTCATTATGTCTTATCAAGTAGGTGCCGACTGGATGAAGAAGATGTGGCTGAAGTAGATGCTCTTGGTACGAAAATTCAACCTGATATCCCTTTTCTTGTGGTCCAAATGACAAAGAGCAATGTCAATGGATCACGACCTTCTCTGGTCATTTGTAGGGGTTATGGAAGGGCACATTTTCCCAAAGGAAGGCAAACCATCACACTTAGACTCCCAGTAGGGAAGAAGAAGTGGCATGCCATTTTCCACATCAGACGAGACAGCGGTGGGTACGTCCTCTATGGTGGGTGGGTAGACTTTGTCCGTGGCAACAATTTGCGCGAGCAGGATGTCTGCCTGCTCCAACCAATGGACAAGGGTGAGGGGAGAAGGTTCACGGTGATTGTCCATTTGCTTCCCAAGGCAAGAAGCACCAGCAGGAAAGTCAGATCTGGATACGTGGTACTAGGCGACGGTACCTGCTTGACCCTCCCACAGGAGAAGATAGTTGCTGAAAGGGTGAAGGTGATCCAATCTGAAGCGCCCATTTACGTGGCAATCATTGATAAGAGCAGTTATTTTGCCCTTGACCTGGGCGCCATGGGAGGTGCTCCTGCTGATGGTCATCTTCCAGACGGGGCACAGACTCTGGTGCTCCGTCAGGCAGGGTGGAGCAAGGCGTGGCATGCCGAGATGCTCGACAGGCGGATGCTGCCCGGGGGAGGGTGGCATGAGTTCGCCGCCGACAACCGGCTGCAGGCCGGAGATCTCTGCCTGCTGGAGCCGGTGAAGGGCGAGGTGCTTGCCATGTCTGTCCACATCATCCGCCGTGAGCAGTACTATTAG
Protein Sequence:
- >EMT33420|Aegilops_tauschii|B3|EMT33420
MIVDEDNDDFPFGRVLEQECRWDHLESQSDNNEKHSIKTKGFEYKSSLLPPPSSSISNMSASNDNDVINMARPRSRLYRRRLPQPHPAQHRSSMAPAAMSDPCDCCKSKVKFIRQMRGNFKDSVVIPQRLMNHFGGDTSGTIKLESPNAQVYDVGVAKKVNRTVLLSGWEAFVDANQIQENNSLMFRYIGFSCFKVAVFDSNGEERILCRARMGNPSHVEKPSMHRSVVLASPLDGTTQSSDSDDCYITPGKIPAVKYSADEFSGEQMEEIEAFVSKIQSEIPVLVVKMNKTNVSDYPDLVIHKEYAGAYFPPRTRFVTLKVPENSKGWQCKFCIRPVGGHNLYLRDFVPDNHVQEGDLCLFQPITEVEATNFAIMVHLLSKAGRAGIPSNQGGDNPHECGSICLDQRETSSKLHYVLSSRCRLDEEDVAEVDALGTKIQPDIPFLVVQMTKSNVNGSRPSLVICRGYGRAHFPKGRQTITLRLPVGKKKWHAIFHIRRDSGGYVLYGGWVDFVRGNNLREQDVCLLQPMDKGEGRRFTVIVHLLPKARSTSRKVRSGYVVLGDGTCLTLPQEKIVAERVKVIQSEAPIYVAIIDKSSYFALDLGAMGGAPADGHLPDGAQTLVLRQAGWSKAWHAEMLDRRMLPGGGWHEFAADNRLQAGDLCLLEPVKGEVLAMSVHIIRREQYY