Information report for EMT08925
Gene Details
Functional Annotation
- Refseq: XP_024318846.1 — LOW QUALITY PROTEIN: B3 domain-containing protein LOC_Os12g40080
- TrEMBL: M8B5P7 — M8B5P7_AEGTA; B3 domain-containing protein
- STRING: EMT08925 — (Aegilops tauschii)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0005773 — Cellular Component — vacuole
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >EMT08925|Aegilops_tauschii|B3|EMT08925
ATGCCAGTACAGAGTGATCAGAGGATGGACAAGTCTTGCACACGATGCAAGGATTACGTCGCACATCAATATTGGGACCACATGGATAATCGGAAAAAGCGTTTCTTTAAGCTTATGCTTGGCAATTTCAGGAATGGAGTGACCATACCAGAGAAGTTTGTGCGCAGTGTTGGAGGAATGATCTCTGAACTAGTCAAACTAGAAACCCCAGATGGTAATACATATAATGTTCATATTGCCAAGGAACTGAATAATCTAGTCCTTCGATCTGGATGGTCAAAATTTGCCAGTGTTTATGAGCTTCAAGAGGGTGACCTTTTGAGGTTCAAATACAATGGGGACTCCCACTTCAAAGTTGAGATCTATGATCCAAGTGCTTGCGAGAAAGAGATATACTGCGTTGTAATGAACCACAATCCAGGTCTCCAAAAACGGAGCGTTCCTCATGATAATCAAATGTTATCACCGGAGGGTGAAAGGCTAGCAAAGCGTCAGAATGGTTGCTGCAGCGACGGTTGCAAAACTTCAGAGATGAATCCAGCAGGCTCTCCACACAAACCAACTAAAAAGGAAGTCCCATCTTCTGAAGATGCCAGGAGTTCGGGTGAACGTAAGACTTTCACCAGGTCTCACTATTTCTTGGCAACAGGGTGCAACCTGACTGATGCACATAAGGTGGAAGTCGACAAAATTGAACAAAATATCAGGCCCGAGATTCCACTATATGTCAAAACCATGTCCAGTGCCAGTCTGGTTGATGGATTTCTGATCATTTGTAATAGGTCATATCTCATATGCAAAGATGACGCTATCAAACACCTTCCACGCAAAGACGAATTCATCACACTTTGTCATGCCAGTCATAGCAAGACATGGGGTGCTCATTACAATATCAATGCTGATGATACATATCATCTTTCTGCCGGCTGGTTGAGATTTGTCGATGACAACCAGTTGCAAAAAGGCGATACTTGCGTGTTTGAAGTATTAAAGAGGCAGAGAAGTTTCACAATGGCAGTTCATCTGCTTAAAGCAAGCCATCATCAACCGCCAGGATTTCCCACTTCTTCCAATAGTCTTAGGCCTGAAGTCAAGAGTTTTAGGCCTGAAGATAAAGTGAGGTTGTCACGATTCACCACTCTGGAGGGCCTGCTGAAGACTAAAGTATATGAGAAAGTAGAAGCTATTAAGCCTGAAATCCCTGTTTTCGTGTCTATCATGATGAAAACCAATGTTAGCAGCAGAACCCCCAGTTTGGCCTTCAGTCTGGATTATGCCAAATATTTTCTCCCTGGTGAGAACCAAATTTTCAGGCTTCATCGGCCCGGGGAAAGCGCTCCATGGAAAGCTGAATTCAGGAGCTTTGGTTCAAGGCGTTGGCTTGTTAAAGGCTGGGAGCAGTTTGTCATCGACAACGAACTGGAACTAGATGATGTCTGCCTCTTCGAGCGGATTGAAAACAAGAAGAAGCTCAGGATGATGGTCCACATCATCCGAAAAGAAGATATTAAGATACTTCAGATATTCGTTGGGGGACATATCCTCATAAAATGCACAAATTCTGGCAATCCCACGAAATATGAGATGATGGGTGAGAAAGGGTGTGAGAGCTGCAAGAAGTGGCAGGAGCACTACTACTGGGAGCACATGGACGTGAGCAAGACCAAGTTCTTCAAGCTCATGACACAAGATTCCCAGCAGCGCTTTCGCATACCGGACAAGTTTGCGAGCAGCTTCATCAGGCAGACGCAGAGCTCGCAGGGATTTGACCTGGAAGCACCAAGCGGCGAAACATGGCATGTGGGTGTTACCAAGGTTGCCAATGACCTGTTCTTCAGTTCGGGATGGGGAGATTTTGTCAAGGCTCATGAACTGCAGGAGAATGACCTCCTGGTCTTCACATTCAGCGGCAACTCCTCTTTTGAGGTCCTCATCTTCGATGCGACCGGTTGCGAGAAACTGTCTTCTCTCTTCGCTGGCGCTGGTATGCACAAACATTTTGATGGTATGGTGGGTCAACAGGTTGAGCAATACTCTCCGAGTGATGATTCTGATGAAGACGACGACAATGATGATGATGATGACGATGACGACGATGATACAAGTGTACCGTCTCAGTTGATTGAATCCCCTCACAAGGTTTCCACTTTAAGGAAATTCAGTGGAAAGACCAAACCAAGTAAAGAGCTTCGTGAATCACCAAACAGTAGCAGCTCATGCGATGTTAAGCATGAGGAAACTGAGGAAGAGGAGAGTGATGATGACACATATGCTGACTTCGACTACTGCTACTCGAGGGCTGCGAAGCAACTACCCGACGACGAAAAAAGTGAAATAATCGGGCTGGCTTCGATCCAACCGGGCAATCCAGCATTCATGACAGTTCTGCTGAGGGCCCACCTGCAACACAAGAACAATTTTCTGGTCATCCCCAGTGAATTTGTAGACGAACATCTCCACATGAGATCACATGAGGTTGTGCTCCTCAGGCCAAACAGAGAAGAGAGGTGGCATGTCAGGTACTACCAGGGGAGCTCCAGCAGAGGCTTCAGGGGCCAACCTTGGGCCAAGTTCGTCCGTGAAAATGAACTGCGCGAGGGGGATGTCTGCGTCTTTGAGCTGATCAAAGGCGCGAGGAATGAGAAGAAGCTGGCGAGGACTACGATGGCCATCCATGTCGCCAGGAGGAGGAAGTCCAACGGCCGGTTTGCCTTAGTGGACTAA
Protein Sequence:
- >EMT08925|Aegilops_tauschii|B3|EMT08925
MPVQSDQRMDKSCTRCKDYVAHQYWDHMDNRKKRFFKLMLGNFRNGVTIPEKFVRSVGGMISELVKLETPDGNTYNVHIAKELNNLVLRSGWSKFASVYELQEGDLLRFKYNGDSHFKVEIYDPSACEKEIYCVVMNHNPGLQKRSVPHDNQMLSPEGERLAKRQNGCCSDGCKTSEMNPAGSPHKPTKKEVPSSEDARSSGERKTFTRSHYFLATGCNLTDAHKVEVDKIEQNIRPEIPLYVKTMSSASLVDGFLIICNRSYLICKDDAIKHLPRKDEFITLCHASHSKTWGAHYNINADDTYHLSAGWLRFVDDNQLQKGDTCVFEVLKRQRSFTMAVHLLKASHHQPPGFPTSSNSLRPEVKSFRPEDKVRLSRFTTLEGLLKTKVYEKVEAIKPEIPVFVSIMMKTNVSSRTPSLAFSLDYAKYFLPGENQIFRLHRPGESAPWKAEFRSFGSRRWLVKGWEQFVIDNELELDDVCLFERIENKKKLRMMVHIIRKEDIKILQIFVGGHILIKCTNSGNPTKYEMMGEKGCESCKKWQEHYYWEHMDVSKTKFFKLMTQDSQQRFRIPDKFASSFIRQTQSSQGFDLEAPSGETWHVGVTKVANDLFFSSGWGDFVKAHELQENDLLVFTFSGNSSFEVLIFDATGCEKLSSLFAGAGMHKHFDGMVGQQVEQYSPSDDSDEDDDNDDDDDDDDDDTSVPSQLIESPHKVSTLRKFSGKTKPSKELRESPNSSSSCDVKHEETEEEESDDDTYADFDYCYSRAAKQLPDDEKSEIIGLASIQPGNPAFMTVLLRAHLQHKNNFLVIPSEFVDEHLHMRSHEVVLLRPNREERWHVRYYQGSSSRGFRGQPWAKFVRENELREGDVCVFELIKGARNEKKLARTTMAIHVARRRKSNGRFALVD