Information report for EMT01811
Gene Details
Functional Annotation
- Refseq: XP_020201512.1 — uncharacterized protein LOC109787361
- TrEMBL: N1QSY8 — N1QSY8_AEGTA; B3 domain-containing protein
- STRING: EMT01811 — (Aegilops tauschii)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi2g37387.1.p, Bradi2g37387.3.p, Bradi1g14560.9.p, Bradi1g14560.10.p, Bradi1g14560.13.p, Bradi1g14560.12.p, Bradi1g14560.11.p, Bradi1g14560.5.p, Bradi1g14560.14.p
- Hordeum vulgare: MLOC_60460.3, MLOC_64801.1, MLOC_64801.2
- Setaria italica: Seita.9G167000.1.p
- Setaria viridis: Sevir.9G164600.3.p, Sevir.9G164600.2.p, Sevir.9G164600.1.p
- Triticum aestivum: Traes_1BS_03473DC22.2, Traes_1DS_D4E92DDD4.1, Traes_1AS_02E068C7E.2
Sequences
CDS Sequence:
- >EMT01811|Aegilops_tauschii|B3|EMT01811
ATGCGGAGATCCAAGGGATCAGGACGGCGGCGAGCTGCAGACGAGCGGAAGCTCATCCGGATGGCGGACGAGGCGGCCGCAGCGAGCTCGATGCAAGCGGCGGCGGCAGCGGCGCTGGCCTCCCTCCACCTCCCTCCTCCAGGACTGACAGAAACTGACAACCAAGATCGGAAAATTTTCGGGAGAGGAGCACGGATAAAGCGGAAGGCGAAGCGGAAGTGGGGCTACGTTGGCGCTGAAGCAGGCGCGGTGGACTCTGGCGGGCTGCGTCCCCGTCTTCTTAGTCATCGCCGGTCGACTTGCAGGGGAGGAGTTGGATCCATGGATGAAGTATTACATGGTGAAGTGGGCATCAGGAGCCGTTTCAGTGCTGGGAGGATTCGAGAGATCATGCGTGGTCTGACACCCCGGCAGCAGGGGTATGTTGCAAAGTATGGATTCGAGCATTTCAATCGTATCGGGGCATTCTCTGTTCATGAGCCACTGACTGAGTGGATCATGGGAAAAATTAACCCCCCGTTCTCTGAGTTCAGAATTAATGCGGACAAGACAATAGTTTTCAGCAAGCCCCTTGTTCAGAAAATTCTAGGTGTACCTACAGGGGGAAGACCCTTTGTACTGCATGGGCAGAAGTCGGACAAAATCAAAGAACTGCGAGATCTGTACTTAAATAATGGACTAAGGGCAACCATCCCCCATTGTGTCAGTTTGCTTAAGAACAATGAGGACGAGGAGTCCTTCATGAGGACATTCCTGCTTCTGGCGGCAGTGCTCACCCCCACCACTGGGAATACCATAGACCTTGACTACCTGTGGGCCTTTGAAGATATGTCAAAGGTTCAGGACCTCGATTGGGCAGGCCATATCACGGAGCATCTGATGGATGAGGTGCAGAAATTTCAGTACAAATCTAGGGAGGAAAAGATGAGAGACTTCTGGGTTGGCGGGTGCTTGCCCTTGCTCACGATTGCTTACATGGACCACTTGGATCTCCCAAGAGGGCGAATTGTAGACCATGAAATTAACTACTCGGTGCCCAGGATCTGCCATGTTTCTAAGGATGATTTCCAGTTTGCCGCAATTGCTGACCTGCATCGTCAACATTTCAAGTTTGCCACATTTGGGATACTTCCATTCCGTGATAGAACACCATACACTGATAATCCAGTAACCGATACAGAAGTAGCAGAAGACGATCTTCGTATTCTCTCGAATGATCAAGTCTTATCAGGGCAATGGGAACTTGTAGAAGTACACGAGCAAAAAATAGACGAACTTGTAAAAGAAACTCAACCTGAAGCCCTTGGGTTTGCAGAAGCGAGCATCGATCATTTCCGTCTTGGAAGAACTGATATCAGCTCAAATCAAGTAGAAGACAGTGGTCGAGAATATGAATCTTCAGAGTCAGATGATCATCCGACACCTCCAGAAGCTGATTATGGGGTAATATTCAGGAGTTATCTATCTGGAACACAAATGGAGAGTGTAAACACGCTTATCCACAAAATTAAACCTGAAACTATTGTATTCGTGGCTACCATGAGGAAGTCCGATGTTCAGCTACCCACTCCTCTTCTGATCATTTCGAAGGAACGCTCATTAGCCGCAGCTGCACGCTTTCCGCATGAAAACGGGGCCGTCACACTTCAGATGCCGGGCAAGAGCGAGAAGTGGAGGCCAAGATTCTTCATAGAAAAAGACAATTGCATGCTTGCGGGTAATTGGTTAGATTTTGTATGTGACAACCAAGTGCAGGCGGGCGACATATGCATCTTTGTACCGGCAATGGGTGGGGAAAGGTCCACATTCACGGTCCATATAATTCGTGCAGAAGCTACTCATCAAAGGGGTGTTAAAAGGGTTCGATCCAGCCATGATTCTCCGGTTGGCGTGGAAGGAATGACAAATCCAGATGCCGTTTAG
Protein Sequence:
- >EMT01811|Aegilops_tauschii|B3|EMT01811
MRRSKGSGRRRAADERKLIRMADEAAAASSMQAAAAAALASLHLPPPGLTETDNQDRKIFGRGARIKRKAKRKWGYVGAEAGAVDSGGLRPRLLSHRRSTCRGGVGSMDEVLHGEVGIRSRFSAGRIREIMRGLTPRQQGYVAKYGFEHFNRIGAFSVHEPLTEWIMGKINPPFSEFRINADKTIVFSKPLVQKILGVPTGGRPFVLHGQKSDKIKELRDLYLNNGLRATIPHCVSLLKNNEDEESFMRTFLLLAAVLTPTTGNTIDLDYLWAFEDMSKVQDLDWAGHITEHLMDEVQKFQYKSREEKMRDFWVGGCLPLLTIAYMDHLDLPRGRIVDHEINYSVPRICHVSKDDFQFAAIADLHRQHFKFATFGILPFRDRTPYTDNPVTDTEVAEDDLRILSNDQVLSGQWELVEVHEQKIDELVKETQPEALGFAEASIDHFRLGRTDISSNQVEDSGREYESSESDDHPTPPEADYGVIFRSYLSGTQMESVNTLIHKIKPETIVFVATMRKSDVQLPTPLLIISKERSLAAAARFPHENGAVTLQMPGKSEKWRPRFFIEKDNCMLAGNWLDFVCDNQVQAGDICIFVPAMGGERSTFTVHIIRAEATHQRGVKRVRSSHDSPVGVEGMTNPDAV