Information report for EMT01422
Gene Details
Functional Annotation
- Refseq: XP_020169976.1 — uncharacterized protein LOC109755480
- TrEMBL: R7W2I6 — R7W2I6_AEGTA; B3 domain-containing protein
- STRING: EMT01422 — (Aegilops tauschii)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g48690.1.p, Bradi4g23270.2.p, Bradi1g50237.3.p, Bradi1g50256.1.p
- Panicum virgatum: Pavir.8NG077400.2.p, Pavir.8NG077400.1.p
- Setaria italica: Seita.8G067000.2.p, Seita.8G067000.1.p
- Setaria viridis: Sevir.8G068300.4.p, Sevir.8G068300.3.p, Sevir.8G068300.2.p, Sevir.8G068300.1.p
Sequences
CDS Sequence:
- >EMT01422|Aegilops_tauschii|B3|EMT01422
ATGGGCATGGTAGATAATAAGCAAAATGTTAAGGTAAAAGAAGAGGAAGATGAAAATCTTAATACAAAAGAGAAAAGGAAGCAAAATAAAGCTGAAGGTGGTAAGAAAGCAGAGGAGAAGCAAAATTCCTCGAAGAGGAAGATGGATAAGAACAGGGAGGAGAAAGAGAAGAAAACGAGAGTTGTTGATAAAAAGGATGATGAGGAGAAGGAGAGGGAGGATCGGAGGAAAAGAAAGGAAAATGAGAAGAAGGTGAAGTCACATAGGGAAAGGAAGGAGGAGAATGAGAATGAGAAAGAAGAACAAGGGCAGCAAGAAATTGAGAAAGAGAAAGTAGAGGAACAAAAGGAGATAAATAAGCAGAAGGGAAGGAAGGAAAATGATAAAGAGGAAGAGGATTCGAAGGAAAGGGATGAGAAGGACCAGAATGACAAAAAAAATTGCCCTCACTTCTTTAGGGCGCTCATATCCTATTCATTTAAGGAACACGTGACCATTCCAGTAGGGTTCCACAAATACTTGGAAGATTGTACAAGAATGGTTTCCCTGAGAGGTCCAAGCGGGAATAAATGGCCCGTAGAGCTGGCTAAAATCTCCGGGGAGCTACGCTTTGCGCGTGGATGGAAGGAGTTCCTCTCTGACAATCGCATCGGGTATGGATACCTGTTGGTATTCCGTTACGACGGGCAGTCACAGTTCTCAGTGACTGTTTTCTTGCCATCGTCCTGCGAGGCTCCCTATGCATTTCTCGCGCAGCCGCAGCGCAAGGACGTCGACGTGGCTGGAGAGGAAGAGAAAGGTCTCATGAGCACCAATGTAGATGGTACTGTCCTTCAAGGAGAAGACGTTCACACTGGCACCAGTGCAGATGGTACACCACAAAATGAAGCTTTAGAAGAAGATGCTTCAGAAGATGAAGAGGTAGAGGAAGTTGAAGACGCATTATCAGAAACTCCGGAGAATAAGGAAGACAGTGAATGTCGCATGTGCAGCGACGATGCATTGGAACCAGCGCAACAACAGCAGGGGGATCTACGCAAGACCGACGATGGTTTTGTGCTTGGGAAGAGGGCTAGGTTTAGGAAGGTTGATGATATCATGGCAGAAGTGGACCGATCCAAGAAGTCCAAGCCTGTGGAGAGGAAGAACTCTGAAGGTCCATCTGGTGATCTAGCTTCTGAGGGAGCAGCATCAAGCGACAGTTTGGCAGAAGAATCGGAGCATCGTCCACCCAAGGAGTCCAAAGCTGAGGTGATAAGGTCTCCATCTAGTGATTCACCTTCTAAGGCGGCAACATCAAGTGACAATTTTGCAGAGTTGGACAGTCGTCCATCCAAGGAGTCCAAGGCCGAGGGTAAAAGCTCTGTTGGTCCTTTAGTTGTTTATACCAGGCCTTCTACTTCAGCATCTAAAAGACTTCCCCTCAAAAAAGCTTCAGAAGAAACAATATCAAGTGACAATTTGGCAGGTGTATTCGCACCAGAATCCGTGTGCACGGACTTAACCATGTGGCACAACTCTTTTGGTAAAAGGCTTAGTAAGCAGAATCAATTCCCGATGTTCAACAAGAGCAATGGTGAAAACCAACCTGGCAGAGTTCTCATCAAGGTTATGAGAAGGTCGGGATTAACGTCGCAGAGGCGTCCAGTAACTCAAAGGGAGAAGGAATATGCCATGGAGAGGGCGCAGAGGTTCAAATCCGAGAGGCCCTTCACTGTCAAGGCAATGAAGCACAACGATGTCTATGCCTCGTACTTCATGATCATCCCGGACAAGTTCGTGAAAACATTCCTCCCCAAAGAGAGTAGGAAGATGACGCTGTGGGACCCGCAGGCGAAGCCGTGGAAGATCACCCCGAAGAAGCTCTTGAGAACATTCCACCCAAGAGAGAGTACGAAGATGACGCTGTGGGACCCGCAGGCGAAGCCGTGGAAGGTGTGGTACGAGTACACCGGCGGTGAGTGTCCCCGCGCGGCGTTCAGCGCCGGGTGGGGAGCGCTCGCCATGGAGAACAACTTGGAGAAGTGGGACGTGTGCGTGTTCGAGCTCCTGGACCAGGAATACAACATCAAGTTGCACGTCCAGAAGGTCGTGCTGATGATCACCCCTTGCATCCTTGCCCCAAAACCTCGCACAAACGAGTGA
Protein Sequence:
- >EMT01422|Aegilops_tauschii|B3|EMT01422
MGMVDNKQNVKVKEEEDENLNTKEKRKQNKAEGGKKAEEKQNSSKRKMDKNREEKEKKTRVVDKKDDEEKEREDRRKRKENEKKVKSHRERKEENENEKEEQGQQEIEKEKVEEQKEINKQKGRKENDKEEEDSKERDEKDQNDKKNCPHFFRALISYSFKEHVTIPVGFHKYLEDCTRMVSLRGPSGNKWPVELAKISGELRFARGWKEFLSDNRIGYGYLLVFRYDGQSQFSVTVFLPSSCEAPYAFLAQPQRKDVDVAGEEEKGLMSTNVDGTVLQGEDVHTGTSADGTPQNEALEEDASEDEEVEEVEDALSETPENKEDSECRMCSDDALEPAQQQQGDLRKTDDGFVLGKRARFRKVDDIMAEVDRSKKSKPVERKNSEGPSGDLASEGAASSDSLAEESEHRPPKESKAEVIRSPSSDSPSKAATSSDNFAELDSRPSKESKAEGKSSVGPLVVYTRPSTSASKRLPLKKASEETISSDNLAGVFAPESVCTDLTMWHNSFGKRLSKQNQFPMFNKSNGENQPGRVLIKVMRRSGLTSQRRPVTQREKEYAMERAQRFKSERPFTVKAMKHNDVYASYFMIIPDKFVKTFLPKESRKMTLWDPQAKPWKITPKKLLRTFHPRESTKMTLWDPQAKPWKVWYEYTGGECPRAAFSAGWGALAMENNLEKWDVCVFELLDQEYNIKLHVQKVVLMITPCILAPKPRTNE