Gene Details:

  • Gene ID: EcC045722.50
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Eucalyptus camaldulensis
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_010061766.1  — PREDICTED: B3 domain-containing protein At5g42700 isoform X2
  • TrEMBL:  A0A059BSX9  — A0A059BSX9_EUCGR; Uncharacterized protein
  • STRING:  XP_010061764.1  — (Eucalyptus grandis)

Gene Ontology:

  • GO:0006281  — Biological Process — DNA repair
  • GO:0051026  — Biological Process — chiasma assembly
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0005524  — Molecular Function — ATP binding
  • GO:0008094  — Molecular Function — DNA-dependent ATPase activity
  • GO:0050662  — Molecular Function — coenzyme binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >EcC045722.50|Eucalyptus_camaldulensis|B3|EcC045722.50
    ATGGTGGCTGCCAAGCCGAAGGAATCCTACGAGGAGTGCCGCCGCAAGAGGCTGGAGGAGAACAAGAAGCGGATGGAGGCTCTCAATCTCCCTCAGCTCTCTCAGTCCCTCCGCAGCTCCTCCTCCTCTCCCAATTCTACCCCTATGAAGCAGTCGAAGCCACGCACGGTAGAGAAGCGGGTGGTGGTGGTGCGGAGGTCCAGTCGCGTCGCCAACATGCCCGCTCCCGTTTACAGAGAGGTGGTGATTGATCGGGTGGCAGTGCCCAGAAGGTATTTTGTCATTTCCTTCATTTTTATGCTCATACTTTTGCGAAATGATTTCCAAGATAGTAAAAAGTCCGCATATTTCGCTATTGAAATTACCAAATTGTTTATGAAAATCGATAGGATTTTTAAGAGGAGGGATCCGCTCAACCTGGTGTATGCCTCTGCTGAGGCCAGGGAATACGCACTAGAGAAGGCAGAGCAACTGCAGTCCACTCTAGAACCTCAGTATCCCACCTTAGTCAAATCCATGCTCCCATCTCATGTCTCTGGTGGTTTTTGGCTGGGCCTTTCTGTCCAATTTTGCAAGTCAAGCCTTCCTAAGAATGACGGGGTCATCACGTTGGTCGACGAAGATGGTGAAGAATTCCCTACGATATATTTGGCGCGGAAGACAGGACTCAGCGGAGGATGGAAAGGGTTCTCTGTAGCTCATGAGCTAACTGATGGAGATGCTGTAGTTTTCCAGTTAATTAAACCCACCACGATGAAGGTAGTAATGATGAGACTGCATATGAGACTCGAAATTCATTTTCTTGCTTCCTAA
Protein Sequence:
  • >EcC045722.50|Eucalyptus_camaldulensis|B3|EcC045722.50
    MVAAKPKESYEECRRKRLEENKKRMEALNLPQLSQSLRSSSSSPNSTPMKQSKPRTVEKRVVVVRRSSRVANMPAPVYREVVIDRVAVPRRYFVISFIFMLILLRNDFQDSKKSAYFAIEITKLFMKIDRIFKRRDPLNLVYASAEAREYALEKAEQLQSTLEPQYPTLVKSMLPSHVSGGFWLGLSVQFCKSSLPKNDGVITLVDEDGEEFPTIYLARKTGLSGGWKGFSVAHELTDGDAVVFQLIKPTTMKVVMMRLHMRLEIHFLAS