Gene Details:

  • Gene ID: DCAR_005590
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Daucus carota
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_017232330.1  — PREDICTED: uncharacterized protein LOC108206517
  • Refseq:  XP_017232332.1  — PREDICTED: uncharacterized protein LOC108206517
  • Refseq:  XP_017232333.1  — PREDICTED: uncharacterized protein LOC108206517
  • Refseq:  XP_017232334.1  — PREDICTED: uncharacterized protein LOC108206517
  • TrEMBL:  A0A162ARD2  — A0A162ARD2_DAUCS; Casein kinase II subunit beta

Gene Ontology:

  • GO:0005956  — Cellular Component — protein kinase CK2 complex
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0019887  — Molecular Function — protein kinase regulator activity

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >DCAR_005590|Daucus_carota|B3|DCAR_005590
    ATGGCCGGTGGAGAAGCATGTGATGAGTGCAAATCGAAGTGCTTATTACTTCATCAAAGGAAAAAGGACCCGTCTCCCCTGATTACTACTTTTTACAAAGTCCTTTATGGAGGTTATGATTATTGGAAATATCTGTGCTTGCCTCAAAAAATTTCGCAAACTATTCCAGTTCTGGGTGCTGGAAAAGTTTATGATCTTGAGGACACTAATGGTCAGCGGTGGCAAGTAACATTAGGCAATAAAGATGGTCACTTGGCTTTTAATAAGGGCTGGGATAAGTTTTATGCAGATCATGGCCTGAGAGAGGGATATAGTCTGGTATTCCACTTTATGGTGAAATCTCATTTTGTTGTTCAGATAATTGACAAAACTGGCTTGGAGAAGCGTATGTTCCCTTTAGAAAATGGGAAAAAAAGAAAGAGAAGTGAAATTGATGTGAATAGTAATGCAGTTGGAGAGTGCCAGAATCATTCTAATAAGCAGGGTTCAGTGTTTCCTGGCGTACCAGACTCTGAAGCTAGAATACATGGCCAACCAATGTCCAAGAATAACTCTTCAAGTGTAAAACCTGGAGATGGTATGTACCAGCATGTTGCATTAGGTGATAGTGATATTGAGCAAGTCTTCACGATTAACAGAGATTCTGGATACAAATGTGAAGAAGGCAGGAGTCCGATATTGGGTTTTATAAACTTGGAAATGCGGGGAGTTGATCCTGATGGAAGTAGTGATAAAAGAACTCATCCTTCTAATACGTCGGCAGCATGTAATGCAGCTGCAAGAATTTTAGATGAGAATCCTGTGTCTGCAAAGGTGGTGAGTGGGGAACCACCAGCGAAAGTGACTGCTCCTACATTCTTTAGCAATAGCAATGTCTCTCTAAAGAAGGAGAATGTGGCAGAAGTTGGCAATGATCATCTTGGTGACTATCAATCAGGCCTAGGGAAACAATCTGCCAAAGTAGCTGCTCCTACATATTGTGACAACAACAATGTCTATTTGAAGAGGGAGAACGTCGCAGAACTCCCTGCAAAAGCGACTGCTCCTACTTTCTCTAACAATAACAATCTCTATTTAAAGAGGGAGAACATGGCAGAAGTTGGCAATGATCGTCATGGTGACCATCAATCCGTTTTACCCACAGGAAACCGAGCTCAGTCACATTCAGAATGTAGGATCAAGAGTTCAACTACATCATTGAACAGAGTACAAATTGAGGAGGTCACAGGAAGTAAAAAACATTCAAAAAAGTATCCCAAGTTTAAAGAAAGGTCTGATCAAATAATTGGCGGCGATGAAAAGAGTAATGAAATCCATAAAGCAGTTAAAGCTGAACCTGTTGATTCATATAATGACGAACGCCTGGATGCATCTGCTCTCACTTTTACTGTAATGGTAGGAAGCAAGGAGCTTTTGACTGACATCGCATATGCTTGTTTAGTGGAAGAATCAGAAACAGACAGTGAGGACTCAGATGTCAGCGGATCTGATGGGGAGGACACATCTTGGATATCCTGGTTTTGCAATTTAAGAGGGAATGAGTTCTTCTGTGAAGTTGATGATGATTACATCCAAGATGATTTTAACCTCTGTGGATTGAGTAGCCAAGTTCCATACTATGATTATGCTCTTGATTTGATTCTGGATGTTGAGTCCTCCCATGGCGATATGTTTACAGAGGAACAGAATGAGTTGATCGAGTCAGCGGCAGAGATGTTGTATGGTCTGATCCATGTGCGTTATATATTGACAACTAAAGGACAGGCTGCCATGTTGGAGAAATACAAGAATGCGGAGTTTGGTAGATGCCCCAGAGTTTACTGCTGTGGGCAACCCTGTTTACCTGTTGGCCAGTCAGATATTCCTCGGCATTGCACTCTGGAGTTTGGTCCCGAGAATAGATCAATAGAAGATTGA
Protein Sequence:
  • >DCAR_005590|Daucus_carota|B3|DCAR_005590
    MAGGEACDECKSKCLLLHQRKKDPSPLITTFYKVLYGGYDYWKYLCLPQKISQTIPVLGAGKVYDLEDTNGQRWQVTLGNKDGHLAFNKGWDKFYADHGLREGYSLVFHFMVKSHFVVQIIDKTGLEKRMFPLENGKKRKRSEIDVNSNAVGECQNHSNKQGSVFPGVPDSEARIHGQPMSKNNSSSVKPGDGMYQHVALGDSDIEQVFTINRDSGYKCEEGRSPILGFINLEMRGVDPDGSSDKRTHPSNTSAACNAAARILDENPVSAKVVSGEPPAKVTAPTFFSNSNVSLKKENVAEVGNDHLGDYQSGLGKQSAKVAAPTYCDNNNVYLKRENVAELPAKATAPTFSNNNNLYLKRENMAEVGNDRHGDHQSVLPTGNRAQSHSECRIKSSTTSLNRVQIEEVTGSKKHSKKYPKFKERSDQIIGGDEKSNEIHKAVKAEPVDSYNDERLDASALTFTVMVGSKELLTDIAYACLVEESETDSEDSDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHVRYILTTKGQAAMLEKYKNAEFGRCPRVYCCGQPCLPVGQSDIPRHCTLEFGPENRSIED*