Information report for DCAR_002967
Gene Details
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Functional Annotation
- Refseq: XP_017229384.1 — PREDICTED: S-adenosylmethionine mitochondrial carrier protein
- TrEMBL: A0A166HRN1 — A0A166HRN1_DAUCS; Uncharacterized protein
- GO:0055085 — Biological Process — transmembrane transport
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn039351
- Arachis hypogaea: Ahy003479
- Beta vulgaris: Bv6_152070_mynd.t1
- Brassica napus: GSBRNA2T00132407001
- Brassica oleracea: Bo01740s020
- Cucumis melo: MELO3C027255, MELO3C027255P1
- Manihot esculenta: MANES_04G091800
- Populus trichocarpa: Potri.001G322700.2
- Prunus avium: Pav_sc0001080.1_g410.1.mk
- Prunus mume: XP_008231041.1
- Prunus persica: PRUPE_3G312100, Prupe.3G312100.1.p
- Ricinus communis: 30131.m006860
- Ziziphus jujuba: XP_015893857.1
Sequences
CDS Sequence:
- >DCAR_002967|Daucus_carota|B3|DCAR_002967
ATGGTACCTGGAAATAATCCTCTGGAATCATTTCATAATTCTGTTCAACTTGTTAAAAATGCTTTTGCCCCTTTCGAGTTTAGTTTCCAGAAAGTTACCAACGATTTTCAGCATTGTTGGTCTGCCTCAAGAAATGGCGCTGACAATGCAATTAGTTTTGTAGCTAAAAAGTCTGAGTTGAGGATTTTGTGTGGTTCCCACAGTAAGGTAGGAAAGGAATGGTCAGTCGAGTGCTTTCTAGGCGGTTTGTTTGATGATTTAGTTCAAAACCTTCAGAAGTTGAATTTAGGTGCTGGAGAAATCGAATGTACTATTTCTGATTTATGTTTAGGTACTCCGAGCGGCAATAAGTTTAATCATGTTAAGGCATTAGTTGGTATATTCAAGGGTAGACGAACAGATGATAGTGGAGTTTTACTAAATGTGAAGTTTGCGAGAGTGGGAGGTGTTCCAGCAGGTAATGTTGCAGTAATAGATTCTGAGAAGGAGATGACATGTGAAGCTTCTACTGTTGCACCTACTGTGGACATACCCGCTGAAAGCGTTTTTAAATCTGCACTGGCAGGAGGCATTTCTTGTGCTTTTTCTTCGTTTATAATGCACCCTGTAGATACAATAAAGACTCAAGTACAGGCATCAACACTTACTTTGCCAGAAATAATAGTAAAAATTCCACAAATTGGAGCTCGAGGACTATACAAGGGCTCCATTCCGGCAGTTTCTGGGCAGTTTCTAGGCCATGGGTTGAGAACTGCAATTTGTGAAGCAAGCAAGTTTGTATTGGTATATCTAGTCCCAACACTTCCGGATATACAGGTTCAATCTGCTGCATCGCTATGGAGCACTGTTCTGGGGACCACCTTTCGAGTACCTACCGAAGTAATAAAGCAAAGATTACAAGCTGGAATATATGAGAATGTAGGAGAGGCACTCATTGGTACTTGGCAACAAGATAGCCTTAAGGGTTTTTTTCGAGGGACTGGTGCTACTCTTTGCCGTGAAGTTCCCTTCTATGTTGCAGGCGCAGGGGTTTATGCTGAATCCAAAAAGGCTGTTCAGCACCTATTAGGCAGGGAACTTGAGCCCTGGGAAACAATTTTAGTTGGGGCTGTATCTGGTGGGTTAGCTTCAGTCACTACAACTCCGTTTGATGTAATAAAAACTAGAATGATGACTGCTATCCCAGGGCAACCTGTTTCGATGTCAACGATAGCATTCTCTATAATACGTCAAGAGGGACCCCTAGGATTATTTAAAGGAGCTGTACCCAGATTTTTCTGGGTTGCGCCACTAGGTGCTATGAACTTTGCTGGATATGAGCTTTTAAGGAAAGCAATGGACAGAACCAATGCACAAAAGGTTATTAAAGAGTCAAAATTAAAGTTTCTTTTCCAGAAGCAGCTTCAGAACAGTGATGTTAATAATCTGAAGAGGATGGTGATTCCAAAGAAAGCTGCTGAGGCATACCTTCCTAAATTAGATAAAAAAGGAGGGATATATATTGAAATGATCGATGTCGATGGATCTCATATTTGGAATTTCATTTACAGTAGTCAAGCCAATTATAGTCTTAAAGAGTTGATTAATCTTGATCCAGGGGAGTTTGTTAACAAACACCAGTTATCAACCGGTGACCTTATACTGGTGTATGAAGATCGCGAAAGCAAGGAATACGTAATTGAGGCTAGAAAAACACTGAGCAAGAGTCCGAATGACAGTCCCAAAAAGAAGATTCTCAAAACCCACTCTAACAAAGCTAGTGCTCGAGGTCAGGCACCTGACGACACTCCTATGAACGACGTTCCTGCTGCTGCTCCACCTCCTTCCGGAGTTAAAGACAATTTGCCAGTAAAACTTGAACCAACCGATGATGCTACTAATGAAATTCAAGTTATGGATTGTACTAATGCAGACAGTGGTATGCCACTGCCTGATTACGGGTTTGACGCTTATAATCCTTCTGGTACCATCGACAATGTGCTGAACCTCCCGAATCCGAATGATAGCAGCTCCTCACTCATCTACAATGACATGAATTTTCCCAGTGACTATTTGTTTAATATGTGGGAGCCAGGCGCGTCGAGCACTCAGCCGATACCATCGTTTCAGAATCTCTGTTTTGACGATATCTTGAAGGGTCTGTAA
Protein Sequence:
- >DCAR_002967|Daucus_carota|B3|DCAR_002967
MVPGNNPLESFHNSVQLVKNAFAPFEFSFQKVTNDFQHCWSASRNGADNAISFVAKKSELRILCGSHSKVGKEWSVECFLGGLFDDLVQNLQKLNLGAGEIECTISDLCLGTPSGNKFNHVKALVGIFKGRRTDDSGVLLNVKFARVGGVPAGNVAVIDSEKEMTCEASTVAPTVDIPAESVFKSALAGGISCAFSSFIMHPVDTIKTQVQASTLTLPEIIVKIPQIGARGLYKGSIPAVSGQFLGHGLRTAICEASKFVLVYLVPTLPDIQVQSAASLWSTVLGTTFRVPTEVIKQRLQAGIYENVGEALIGTWQQDSLKGFFRGTGATLCREVPFYVAGAGVYAESKKAVQHLLGRELEPWETILVGAVSGGLASVTTTPFDVIKTRMMTAIPGQPVSMSTIAFSIIRQEGPLGLFKGAVPRFFWVAPLGAMNFAGYELLRKAMDRTNAQKVIKESKLKFLFQKQLQNSDVNNLKRMVIPKKAAEAYLPKLDKKGGIYIEMIDVDGSHIWNFIYSSQANYSLKELINLDPGEFVNKHQLSTGDLILVYEDRESKEYVIEARKTLSKSPNDSPKKKILKTHSNKASARGQAPDDTPMNDVPAAAPPPSGVKDNLPVKLEPTDDATNEIQVMDCTNADSGMPLPDYGFDAYNPSGTIDNVLNLPNPNDSSSSLIYNDMNFPSDYLFNMWEPGASSTQPIPSFQNLCFDDILKGL*