Gene Details:

  • Gene ID: Csa20g021340.1
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Camelina sativa
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_010492303.1  — PREDICTED: GPI mannosyltransferase 3-like isoform X1
  • TrEMBL:  R0FEL0  — R0FEL0_9BRAS; Mannosyltransferase
  • STRING:  XP_010492303.1  — (Camelina sativa)

Gene Ontology:

  • GO:0006561  — Biological Process — proline biosynthetic process
  • GO:0055114  — Biological Process — oxidation-reduction process
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0004735  — Molecular Function — pyrroline-5-carboxylate reductase activity
  • GO:0016757  — Molecular Function — transferase activity, transferring glycosyl groups

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >Csa20g021340.1|Camelina_sativa|B3|Csa20g021340.1
    ATGGAAATAAGGAAGCGGAAGATCGCCGGCGGCGATGGAGACGGTGGCGCGTCAGTTAACGACGTTAATGAACCCGATTCTAGATCTCCGAGGAAGATATTCTTGTTGTGCCTGGGGTTTCGTGTAGTAAATGCTCTGTTGATTAAGACTTATTTCAACCCTGATGAACATTGGCAATCACTTGAAGTAGCTCACCGCACCGTCTTTGGGTATGGTTATATGACATGGGAGTGGAAGAGAGGAATACGAAGCTTTTTGCATCCTATGGTATTCGCATTCTTGTATAAACTTCTCCAAGTTACGGGCCTTGATACTCCCTACATAATGAGGAAAGCTCCACGTCTCATGCAATCTGTATTCTCAGCTATTGGTGATCTCTATCTGTATAAACTCTCAGATGCTCTATATGGGAAAAATGTTGCAAGCTGGTCTCTCTTTTGTCAAATGGCAAACTGGTTTGTCTTCTTCTGTTTGAACCGTACCTTTTCAAACTGTTTGGAGACTGTTCTTACCATCATGGGGCTGTACTACTGGCCTTGTATTAGAAACCATTCAACTAACTATCCCGTTAATCGGAAGTGCGGTTTGGTCATAGCAGCCCTAGCATGTGCCATAAGGCCAACAAGTGCAATCATATGGTTATATGTTGGGATGCTCGAGCTATTTTTGACACCTAATAAGGTCAAATTCATCATTCTAGAGGTGATCCCGATTGGATCTTTGGTCCTCGGTTTCACCTGTTTGCTGGACCGTCTGATGTACGGCTCATGGGTTATTGTGCCTCTCAATTTTCTGAAGTTTAATTTCCTTTCATCTGGTGGAGACTATTACGGAACTCACCCATGGCACTGGTACTTCAGCCAGGGATTTCTTGTCATGCTTTTCACTTTTACACCATTCTCCATTACTGGAATGATCAAGTCTAAGAATCATAAGCTTTCAGCTCTTATTCTATGGGTTTTAGCATTATACAGCGTACTCGGCCACAAGGAATTCAGGTTTGTCCTGCCTGTGCTGCCAATAGCTTTGATATTCTCTGGGTATGCGTTTGCTCGAATGGAAGTATCTGGTTCATTATCATCATCAGTCACTAAAAAGGAGCAAGTCCCTCGACAGAACCATACCACCAAGTGGTCTCCTAAATTAAGACTTTCAGTCTTTTTTTTGCTTGCTACCAATATCCCAATGGCACTATATATGAGTTTATACCATCAGAGAGGAACCGAGGATGCGATGAACTACTTATCGGATGAAGCATACAAAGGGAGAGTGAAGAGGTTTTTCCACGCGCATTTCAAGGTTGATCGAGATCTTCAATCCTCAGTGGTCGTCTATGTTATGATACCAACTTCGTACTACGAACACTTACCACGCCGGTTGCCCAAGACTGCGATTCTCATGGGAACCGGTGGGAAGATTTGGAAAGTAGCAATGAAGAGCATACGAGGGCAAGTGTACTTTGTACAAGGTTGGCCCAGTTTCGTGGCGGATAACGAGCTTAAAGATGGAGAGTTCTTGACATTTGTGTTTGATGGTTACAACCGTTATGAAGTGAGCATATACGGTCACGGAGGTTGCAAGGAAATTCGAGCAGTTGTTGAAGTTGAAGACATCTCTGATGACTCAGAGAGTGACAACAACAGTGACGAATCTCTTATTCTTCCGATACCGGCGGAGAGCTTTAAGGTAGGATTCATTGGAGCTGGTAAAATGGCTGAGAGTATAGCTAGAGGTGTGGTTGCCTCTGGTGTGCTTCCTCCGAATCGTATCTCCACCGCCGTTCACTCCAATCTCAACCGTCGTGACGTCTTCGAATCTTTCGGCGTCAGTGTCTTCTCTAATAGCGAAGACGTTGTTAAAGAAAGTGATGTTGTTATATTCTCTGTCAAACCCCAAGTTGTTAAGAAGGCTGTCACGGAGTTAAGATCGAAGCTTTCAAAGAATAAGATTCTGGTTTCGGTTGCTGCTGGAATCAAGTTGGCAGATCTTCAGGAATGGTCTGGGCAAGATCGATTCATAAGGGTGATGCCTAATACACCAGCAGCAGTTGGTGAGGCAGCTTCAGTTATGAGCCTTGGAACAGGAGCAACGGAAGAGGATGGAGCAATTGTAGCTAAGTTGTTTGGCGCGGTGGGGAAGATATTGAAAGCTGATGAGAAGATGTTTGATGCTGTCACTGGTCTCAGTGGAAGTGGACCAGCATACATATTCTTAGCCATTGAAGCTTTAGCTGATGGAGGAGTAGCTGCTGGTCTACCACGAGAACTCGCATTGAGTTTAGCTTCACAAACTGTTCTTGGAGCTGCAACAATGGTGAGCAAAACGGGGAAGCATCCAGGTGTGTTGAAAGATGATGTTACTTCACCCGGCGGCACTACAATAGCTGGAGTTCATGAGCTGGAGAAAGGCTCTTTCCGTGCAACACTTATGAATGCTGTTGTTGCTGCAGCTAAGCGAAGCAAGGAGCTCTCACAAAGCTAA
Protein Sequence:
  • >Csa20g021340.1|Camelina_sativa|B3|Csa20g021340.1
    MEIRKRKIAGGDGDGGASVNDVNEPDSRSPRKIFLLCLGFRVVNALLIKTYFNPDEHWQSLEVAHRTVFGYGYMTWEWKRGIRSFLHPMVFAFLYKLLQVTGLDTPYIMRKAPRLMQSVFSAIGDLYLYKLSDALYGKNVASWSLFCQMANWFVFFCLNRTFSNCLETVLTIMGLYYWPCIRNHSTNYPVNRKCGLVIAALACAIRPTSAIIWLYVGMLELFLTPNKVKFIILEVIPIGSLVLGFTCLLDRLMYGSWVIVPLNFLKFNFLSSGGDYYGTHPWHWYFSQGFLVMLFTFTPFSITGMIKSKNHKLSALILWVLALYSVLGHKEFRFVLPVLPIALIFSGYAFARMEVSGSLSSSVTKKEQVPRQNHTTKWSPKLRLSVFFLLATNIPMALYMSLYHQRGTEDAMNYLSDEAYKGRVKRFFHAHFKVDRDLQSSVVVYVMIPTSYYEHLPRRLPKTAILMGTGGKIWKVAMKSIRGQVYFVQGWPSFVADNELKDGEFLTFVFDGYNRYEVSIYGHGGCKEIRAVVEVEDISDDSESDNNSDESLILPIPAESFKVGFIGAGKMAESIARGVVASGVLPPNRISTAVHSNLNRRDVFESFGVSVFSNSEDVVKESDVVIFSVKPQVVKKAVTELRSKLSKNKILVSVAAGIKLADLQEWSGQDRFIRVMPNTPAAVGEAASVMSLGTGATEEDGAIVAKLFGAVGKILKADEKMFDAVTGLSGSGPAYIFLAIEALADGGVAAGLPRELALSLASQTVLGAATMVSKTGKHPGVLKDDVTSPGGTTIAGVHELEKGSFRATLMNAVVAAAKRSKELSQS*