Gene Details:
- Gene ID: Csa10g010860.1
- Gene Family: B3 Family
- Description: B3 Family protein
- Species: Camelina sativa
- Source: B3 family gene from PlantTFDB
Protein Features:
- PROSITE profile: PS50863
- SMART: SM01019
- SuperFamily: SSF101936
- Pfam: PF02362
- Gene3D: G3DSA:2.40.330.10
- InterPro: IPR003340 IPR015300
Annotation Proteins:
- Refseq: XP_019086204.1 — PREDICTED: B3 domain-containing protein REM8-like
- Swissprot: Q8H2D1 — REM8_ARATH; B3 domain-containing protein REM8
- TrEMBL: D7MB41 — D7MB41_ARALL; Uncharacterized protein
- STRING: XP_010451094.1 — (Camelina sativa)
Gene Ontology:
- GO:0044237 — Biological Process — cellular metabolic process
- GO:0005622 — Cellular Component — intracellular
- GO:0000166 — Molecular Function — nucleotide binding
- GO:0003677 — Molecular Function — DNA binding
- GO:0003824 — Molecular Function — catalytic activity
Family Introduction:
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature:
Sequences:
CDS Sequence:
- >Csa10g010860.1|Camelina_sativa|B3|Csa10g010860.1
AACATTCCTATCAAGTTCTTCTCCGAGCATACCGTCGGGAAACACGAGGGAAGAAGTGTAAATTTGGTATCAGATGCGTCAGAGAAAACATGGAAAGTGAAGATGGAAGGCCATAGACTCACCAAAGGTTGGAAAGAGTTCGTCGAGGCGCATGACCTTCGAGTTGGTGACTTCGTCGTATTTAGACACGAAGGAGACATGATGTTCCATGTCACTGCTTTAGGATCTAGTTGCTGTGAGATTCAATACGCACAAGAGAGTAACGAGACTGACATGTCTTCGAGATCTGAGAAGCAAGTTAAGGAGAATGTGAAAACAGATTCTGATCTCAATTGTTTTAGCCTATCTGTGACAGAATCAAACCTATCAAGAGATACAGTGTGTGTCCCCATAAATTTCGCAAAGCGAAACGGTTTAGGCAAAGAAAGGCAAGAGATAGTTTTGATGAACGAAGAAGGGAAGTCATGGGAATCAGTAGTAAAGAGCTGGGGTGGTTGTAGGCTTTCCATTGTTCGAGGTTGGACAAGTTTTTGCAATGCAAATAAACTAGAAGTTGGAGATTTTTGCACATTTAGACTGCTCCCAAACACAGCGGAAACGCCTGTGTTTAAGCTCTGCAGCCGTACAATGTCAGAGAGGACAGTCCAGTCCGCGGAAGGTTGCATCGATGGCGAAACTGTAGGAAAGCGGTTTGTGAAGTTAACTCTTACACGAAACAGCCTTCACATTGGTAAACAGCATCTACCGGTACGTTTCACGAGAGAGAACGGACACATCAATCCGGGGAAGATAATTCTGGTGGACAAAAACAGATCTGAATGGCCAATGAACCTTAAGGTTGACAAAAGTACTGGTTTGATGTATATTATTAGTGGCAATAATGGTTGGAAAAGTTTCTGTGCCGCCAATGAAATAGGTGCAGGGGAGTCTCTAACTTTGGAGTTGATCCGAGGAGGTGTAACTCCTTTGCTTAAGTTCAGCTCCAAGATGGAACAACCACCATTTGAAGCCGAGGCTCGGGAACACAAGAGAGCTAGAGTCCAAAGATGGAGCCAGGAGACTGAACCGAAAGTTGAGATGAGAGAGAAGACAGCTGAGGAATTAGGAGAACCCTCTCGAGCATCTCACAAATCCTGTGGTAATCAAGAAAACTTGCAGCATACGCAAGCTTGCTCTGTCTCAAATCAGGTGGCTAAGGTGAAACAGAGCGTTGTTGATGCTTTAACTAGTGTAAAAAGATTTATGGCAGAACTCGAGACAACGGAACAGAAGCTAGAAATCTCATTGCAGGAAATCAACAACCTAGGTCCGCCAACATCTGAGAAGCAAAGTACTCTTCCAGTACTTCCAACAGAATATGGTCCTCCAAAAGATTTGAATCTTTCCAACAACATATTTATAGCCTTGAGGAAGCTTCGTTCAGATCTTGTCAAAGAAGCCCCTGATGGTGTCATGGCATATCATATATTTATGAATTCAACGCTTCTGCAGATAAGCAGACAAATTCCGAGAACCAAAGAGGAACTCCTAGGAATCAGTGGCCTTGGGGAGGCCAAAGTAAAAGAGTACGGTGATCGGTTGTTGGAAACAATAGAATCAACGGTTAAGGAGTACTATGTGGAACTAATAAGAAAGATTCCATCATCAGCAACGAGAGTCCCGTATCTAGGGAAATGTTTTAGTAGAGTCAATATGCTCAACATGTCGAGGAATATAATTCTGGTGGACAAAGACAAAGTTGAGTGGCTGATGAAGCTTAAAGTTGATAGTAGAGGAGCGATGACTATTTATGGTCGTCATGATTGGAAAAGTTTTTGTGCCGCAAATGAAGTAGGCGCAGGGGAGTCAATGACTTTGGAGTTGATCAGAGGAGGGACAAGTCCTTTTCTCAAGTTCTGCTCCAAGATGAAGAAACCAACATTTGAAGCAGAGGATGGGATCCGCAAGAAAGCTCCAGTTCAAATCCAAAATGGGGGACAGGAAACAGACAAGGGAGAACCATCTCGAGAATCTAACAAATCCCGTGGTGATCAAGGAAACTTACAGCAAACGCAAACTTTGTCTGTCAAAGATCAGGTGGCTAAGGTGAAAGAGAGCGTTGTAGATACCTTAACTAGTATCAGACGTTTTCTGACAGAGTTCGAGACAAAGGAACAGGAACTACAAGATTCTAAATGGGGAGAAGAGAAGACAATGGGAACACGCCAAGATCTTCGAGTAATAATCAAGCTTAAAATGTGA
Protein Sequence:
- >Csa10g010860.1|Camelina_sativa|B3|Csa10g010860.1
NIPIKFFSEHTVGKHEGRSVNLVSDASEKTWKVKMEGHRLTKGWKEFVEAHDLRVGDFVVFRHEGDMMFHVTALGSSCCEIQYAQESNETDMSSRSEKQVKENVKTDSDLNCFSLSVTESNLSRDTVCVPINFAKRNGLGKERQEIVLMNEEGKSWESVVKSWGGCRLSIVRGWTSFCNANKLEVGDFCTFRLLPNTAETPVFKLCSRTMSERTVQSAEGCIDGETVGKRFVKLTLTRNSLHIGKQHLPVRFTRENGHINPGKIILVDKNRSEWPMNLKVDKSTGLMYIISGNNGWKSFCAANEIGAGESLTLELIRGGVTPLLKFSSKMEQPPFEAEAREHKRARVQRWSQETEPKVEMREKTAEELGEPSRASHKSCGNQENLQHTQACSVSNQVAKVKQSVVDALTSVKRFMAELETTEQKLEISLQEINNLGPPTSEKQSTLPVLPTEYGPPKDLNLSNNIFIALRKLRSDLVKEAPDGVMAYHIFMNSTLLQISRQIPRTKEELLGISGLGEAKVKEYGDRLLETIESTVKEYYVELIRKIPSSATRVPYLGKCFSRVNMLNMSRNIILVDKDKVEWLMKLKVDSRGAMTIYGRHDWKSFCAANEVGAGESMTLELIRGGTSPFLKFCSKMKKPTFEAEDGIRKKAPVQIQNGGQETDKGEPSRESNKSRGDQGNLQQTQTLSVKDQVAKVKESVVDTLTSIRRFLTEFETKEQELQDSKWGEEKTMGTRQDLRVIIKLKM*