Gene Details:

  • Gene ID: CCG030596.1
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Populus euphratica
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_011025335.1  — PREDICTED: B3 domain-containing transcription factor NGA1-like
  • Refseq:  XP_011025337.1  — PREDICTED: B3 domain-containing transcription factor NGA1-like
  • Refseq:  XP_011025338.1  — PREDICTED: B3 domain-containing transcription factor NGA1-like
  • Refseq:  XP_011025339.1  — PREDICTED: B3 domain-containing transcription factor NGA1-like
  • Refseq:  XP_011025340.1  — PREDICTED: B3 domain-containing transcription factor NGA1-like
  • Refseq:  XP_011025341.1  — PREDICTED: B3 domain-containing transcription factor NGA1-like
  • Refseq:  XP_011025342.1  — PREDICTED: B3 domain-containing transcription factor NGA1-like
  • Refseq:  XP_011025343.1  — PREDICTED: B3 domain-containing transcription factor NGA1-like
  • Refseq:  XP_011025344.1  — PREDICTED: B3 domain-containing transcription factor NGA1-like
  • Refseq:  XP_011025345.1  — PREDICTED: B3 domain-containing transcription factor NGA1-like
  • Swissprot:  O82799  — NGA1_ARATH; B3 domain-containing transcription factor NGA1
  • TrEMBL:  U5GT98  — U5GT98_POPTR; Uncharacterized protein
  • STRING:  POPTR_0002s18260.1  — (Populus trichocarpa)

Gene Ontology:

  • GO:0009908  — Biological Process — flower development
  • GO:0048366  — Biological Process — leaf development
  • GO:0003677  — Molecular Function — DNA binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >CCG030596.1|Populus_euphratica|B3|CCG030596.1
    ATGTGGCCTGGTTCATTTGATCAGTCACAACAAGATAGCAAAACCCAAGAACCATCTCTCAATTTTGATAAGAAGCTAGAGCTCATGGAATTATCACTGGGAAATAACAACGAAACTGAGAGCACTAGTGCCGCTGCTGTTGTTGGTGCTAGAGAGTCTATTGAGAGAGAGCACATGTTTGACAAAGTAGTGACCCCAAGTGATGTAGGCAAGCTAAACCGTCTTGTTATACCAAAGCAACACGCAGAGAGGTACTTCCCTCTCGATTCTTCATCGAATGAAAAAGGCCTCCTCTTGAACTTTGAAGACCGGAACGGCAAGCCATGGCGGTTCCGGTACTCTTATTGGAACAGTAGTCAAAGCTATGTAATGACCAAAGGTTGGAGCCGGTTTGTAAAAGAAAAAAGGCTTGATGCAGGCGATATTGTGTCGTTCCAACGCGGTGTTGGTGAGTCAGGCAAGCACCGTCTGTTCATAGACTGGAGACGCAGGCCTAATGCACCAGATCCAACAACATTCTCACATTCAGAGCTCCAAAATCAGCAACACTATCCACAGTCAGTGCGGTGGGGCAGGCTGTACTCCATGCCCCAATCTAATTTATCCATGCAGCAACCTCAATTGCGACATTTGAATTACAGCATTCATCCTTATCAACAACAGCAACATCAGAATCGTAATCATCAGAATCATTATCATCAACCGTCTACGATTAGTTATGGCAATTCAGCGCTGTATTACTTAAGGCCATCAGAGACACTTCAGATTGGGGCAATGCATCAACAAGCTGGAGGAAGTCATGTCCCACTGGTGATAGATTCAGTGCCAGTTGTTCACGGTAAAACTGCGGGGAAGCGGCTCAGGTTGTTTGGTGTAAACATGGATTGTCCTACACAGGATGAAGATCAGTCATCTTCCATCACAATGGCACATGGCACAATGGGTTCATTCTCTTCTCATTTGGCTTCATCTTCTCTCCTTCCTCCTCTCCAATTAAGGGCACCCACTAGTGCCCCAATGCAAGCTGAGGTTTTAAAGAAAGGAAAGAATTCCTTCTCTTTTGATCTAGATCTTTAA
Protein Sequence:
  • >CCG030596.1|Populus_euphratica|B3|CCG030596.1
    MWPGSFDQSQQDSKTQEPSLNFDKKLELMELSLGNNNETESTSAAAVVGARESIEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVGESGKHRLFIDWRRRPNAPDPTTFSHSELQNQQHYPQSVRWGRLYSMPQSNLSMQQPQLRHLNYSIHPYQQQQHQNRNHQNHYHQPSTISYGNSALYYLRPSETLQIGAMHQQAGGSHVPLVIDSVPVVHGKTAGKRLRLFGVNMDCPTQDEDQSSSITMAHGTMGSFSSHLASSSLLPPLQLRAPTSAPMQAEVLKKGKNSFSFDLDL