Gene Details:

  • Gene ID: AT2G36080.2
  • Gene Name: ABS2, ARF31, F9C22.1, NGAL1
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Arabidopsis thaliana
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  NP_001324302.1  — AP2/B3-like transcriptional factor family protein
  • Refseq:  NP_181152.2  — AP2/B3-like transcriptional factor family protein
  • Swissprot:  Q8GYJ2  — Y2608_ARATH; B3 domain-containing protein At2g36080
  • TrEMBL:  A0A178VSG2  — A0A178VSG2_ARATH; NGAL1
  • STRING:  AT2G36080.1  — (Arabidopsis thaliana)

Gene Ontology:

  • GO:0045892  — Biological Process — negative regulation of transcription, DNA-templated
  • GO:0080167  — Biological Process — response to karrikin
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >AT2G36080.2|Arabidopsis_thaliana|B3|AT2G36080.2
    ATGTCAATAAACCAATACTCAAGCGATTTCCACTACCATTCTCTCATGTGGCAACAACAGCAGCAACAACAACAACACCAAAACGACGTCGTGGAAGAAAAAGAAGCTCTTTTCGAGAAACCCTTAACCCCAAGTGACGTCGGAAAACTCAACCGCCTCGTCATCCCAAAACAGCACGCCGAGAGATACTTCCCACTAGCGGCCGCCGCCGCAGACGCCGTGGAGAAAGGACTTCTCCTCTGCTTTGAGGACGAGGAAGGTAAACCATGGAGATTCAGATACTCGTACTGGAACAGTAGCCAGAGTTATGTCTTGACCAAAGGCTGGAGCAGATACGTCAAGGAGAAGCACCTTGACGCCGGAGACGTCGTTCTCTTCCATCGACACCGTTCAGACGGCGGAAGATTCTTCATTGGCTGGAGAAGACGCGGTGACTCTTCTTCCTCCTCCGACTCTTATCGCCATGTTCAATCCAATGCCTCGCTCCAATATTATCCTCATGCAGGTACCCTTTTTATTTAA
Protein Sequence:
  • >AT2G36080.2|Arabidopsis_thaliana|B3|AT2G36080.2
    MSINQYSSDFHYHSLMWQQQQQQQQHQNDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRRRGDSSSSSDSYRHVQSNASLQYYPHAGTLFI