Information report for Achn210521
Gene Details
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Functional Annotation
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00134896001, GSBRNA2T00005693001
- Brassica rapa: XP_009112350.1
- Citrullus lanatus: Cla001807
- Citrus sinensis: orange1.1g023721m, orange1.1g026006m, orange1.1g025968m
- Cucumis melo: MELO3C007521P1
- Cucumis sativus: Cucsa.102040.2, Cucsa.102040.1
- Daucus carota: DCAR_022876
- Juglans regia: WALNUT_00011204-RA
- Manihot esculenta: Manes.13G131000.1.p
- Ricinus communis: 29676.m001677
- Vitis vinifera: GSVIVT01031853001
- Ziziphus jujuba: XP_015890103.1
Sequences
CDS Sequence:
- >Achn210521|Actinidia_chinensis|B3|Achn210521
ATGTTGCGTGTACCACCAGATTTTGTCAAAAATTTCAATGGAATCATACCAAATAAGATCATACTTAAGGATCTTGGTGGAAAATTTTGGCATGTGGAGACGGAAGAAGATGAAAATGGTGTATTTTTCAAGAACGGATGGCAAAGATTTGCAAGTGATCATTCTTTAGAGCTAGGAAACTTCATTGTGTTTAGATGCAACAGAAATTCTTCATTTGATGTCAAAATATTTGGGAACAATGGTTGCATGAAAGAAGAAGATTTAGCATACAAATGCGTCAATGAAGAAATTCCAGCTGCTGAGAAGACTGCCATACCTGTTAAGAATGATGAAGAGTCAGAAGAAGTGGATACTTCTCCTAAGCCCACTCGTAATTTCAAGCGGAAGTACTCTGAAGTAAACATGAAAAGATCTGAAAAAACTGGAGGTACAGGTTCTAATGCAGTGAGTCGACGTAAATCACCAAGAATTGGTTCAAAGACCATTGAACAACACGGGACATTTGATTCATCAGAGTTTTCTAAACCAACAAATCCACATTTTGTTGCATCTATCCAACCAGCCTCATTTTACCGTCTGAACATTCCCAAGGATTTTTTGGATAAATATGGTATCAAAATGGAGCCAGAAATGGTATTACGCAATCAGGAAGGCAAATTGTGGCCTGTGGATGTTACTTTTCCCAAGAATGGCCAAATTACTCTCTCCAAGGGGTGGATGGATTTCCAGAAGGAGAACGGTCTTGGCTTCGATGACAAGTGCATATTTGAGTTTGTCTTTCGTAGAGGAAGACGACTTAGCAGAGAAATACAGGTGCGAATTCTCCGTGCAACGGAAAACAAAATCCCCAGTGGAGTGATTGTTATGGATTTGCAATTGAAAGTTATTGCAGTTGCAGAAGAAGGAGGAGAAATCAGGTCGGAAATGAAAGGTCCGAAGTCGGTTTTTGGTTACATCTGTTATTTCATCTTCTTCATTCCCGTTTTCTTCTTGCTCTGTGGCGTCGGACTCTACAAAGTTGTTCTGGCTATTATAGTTGGTATATTGTCTAGCTTTGGTTATGGATGTTATGCTGCTGTTGTTGCATACCAGGAAAGTTCTACATGGAGAGGATTACTGTATGTAGTTGCTTCTGCTGCCTTATTTGATGAGTACACCAATGATTTACTCTACCTGCGTGAGGGATCCTGCTTTCCAAGTCTGCATGAACAGCATGAGGGTCTACATGGTGAGGAACCCTTGATAGGGCCACCTTCTGTGAAAACGAAGACGCTGCAAGCTGTCGTGATATGGGATGGTTTCATTAAAGGATGTGGAGATATTGGGAAAGAGCTTCTCAGAGTTGGAGCCATTGGAATTGCGGATCTGGACGCATGGAAAGAGTCAAGGAACAAGATTGTTAATATTGGAATTCCTGCATATGCTTTTCTTGAATGTTTTCTTTACTCTATCAAGAGTGGTTCCCCTGGCTTTCTCTTGCGTGATAATGTTGAGATTACCCATGTGAATAGACCAGAGGGAAGGATTTTTGACTGGCTTTATGAGCCCATGAGTATCATGAAGGAGCAGATTAGAAGACTTAATTTAGAGGCAAGTGAAGAGTTATATTTCTATAAATACTGCCTCTACAGTGGTGATGCATCAAGAATAGAGTCGTGGCAGAATGGTGGCGTGCCTCCTCAGGATGAAATAAAACGGGCCCAATTGGAGGGTATAGCTAGAAGGTTACAAGGATTTTGTTTGACATTGTCGAGGATGCCAACATCCCGGCGTCGTTTCTTCGAAGTGGTTAAAGCTATAGAGCAAGAAGAGGAGAGTCTCGGAGGCCTTAGAGGCGGCAATGATGGTATAGAAGCAGACGAAAAGCTCGAAAATCTAGACGAACCCACCTCGCCTTTGCGCTTGCCGGTCGTAATTCGCCGGCCGGGCAGTGTATTTCGGTACCTGTGGGATGGGAATGAGCTGAATTTGGTTTCTGTTGATGGGAATGCGTTGTCTTTCTCGAGGGAAAATTTTTGTTTGGATTTCGAAGATGGGTTTTGGAGATTGGTTCAAATCTGCGGTTCTAGGGCGATGTTTCGAGCAATTGGAGTAGGATACTCTCGTTCACTTCCATCTGCTGCTGCCTTGAATTGGGTCTTGAAAGATGGGCTCGGAAGGCTCAGTCGGTGCATCTACACTGCTAGCCTAGCATCTGCTTTTGATATCAATTTGAAGAGAGTTCGGTTTTCAACATCTGTTCTGTTCAGTTTGAGCCTCGGGGTTGAGTTGCTGACTCCTGCATTTCCCCAGTATTTCTTGCTTCTTGCATCTGTAGCCAACATCGCTAAACAAATAAGCCTAGCATGCTACCTGGCAACTGGTGATAGGCTTGAAATTATAATAAACACGTGGATACAGTTTGGAAATGTCCCTTCACCAGCAGAAGTGAGTAAAGAGGAAGGTATTGATTTTCTGTGGACCAAAGTTTTTGTCTCCGTTGCTGATTTACAGCAAGGCATTCTCCTTTGTTTGCGTGAAGGGGTTGGCACTGCAGATGTTATCATGGGTTTGTTGCAGGCATGCCACATTCGTAAGGCTATTTTATCCAGCAGGTGCAAGTGGGAGAACATTTCAGAAGCCTGTGGCAGTTATGATTTAGTAATGAGGGATTGGCTTAAATTGAATGAAGATAGCAAGCAATGTGCACAACGGGAATTTAACTTTTTGAATGAGCAGATGTTAGGATTAGGGTGGGCTTGTAAAAACATTTTATTGAGCACACAGGAGCAAGAGCGATATAGTTTTGTAGACGACTGA
Protein Sequence:
- >Achn210521|Actinidia_chinensis|B3|Achn210521
MLRVPPDFVKNFNGIIPNKIILKDLGGKFWHVETEEDENGVFFKNGWQRFASDHSLELGNFIVFRCNRNSSFDVKIFGNNGCMKEEDLAYKCVNEEIPAAEKTAIPVKNDEESEEVDTSPKPTRNFKRKYSEVNMKRSEKTGGTGSNAVSRRKSPRIGSKTIEQHGTFDSSEFSKPTNPHFVASIQPASFYRLNIPKDFLDKYGIKMEPEMVLRNQEGKLWPVDVTFPKNGQITLSKGWMDFQKENGLGFDDKCIFEFVFRRGRRLSREIQVRILRATENKIPSGVIVMDLQLKVIAVAEEGGEIRSEMKGPKSVFGYICYFIFFIPVFFLLCGVGLYKVVLAIIVGILSSFGYGCYAAVVAYQESSTWRGLLYVVASAALFDEYTNDLLYLREGSCFPSLHEQHEGLHGEEPLIGPPSVKTKTLQAVVIWDGFIKGCGDIGKELLRVGAIGIADLDAWKESRNKIVNIGIPAYAFLECFLYSIKSGSPGFLLRDNVEITHVNRPEGRIFDWLYEPMSIMKEQIRRLNLEASEELYFYKYCLYSGDASRIESWQNGGVPPQDEIKRAQLEGIARRLQGFCLTLSRMPTSRRRFFEVVKAIEQEEESLGGLRGGNDGIEADEKLENLDEPTSPLRLPVVIRRPGSVFRYLWDGNELNLVSVDGNALSFSRENFCLDFEDGFWRLVQICGSRAMFRAIGVGYSRSLPSAAALNWVLKDGLGRLSRCIYTASLASAFDINLKRVRFSTSVLFSLSLGVELLTPAFPQYFLLLASVANIAKQISLACYLATGDRLEIIINTWIQFGNVPSPAEVSKEEGIDFLWTKVFVSVADLQQGILLCLREGVGTADVIMGLLQACHIRKAILSSRCKWENISEACGSYDLVMRDWLKLNEDSKQCAQREFNFLNEQMLGLGWACKNILLSTQEQERYSFVDD*