Information report for AA26G00577
Gene Details
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Functional Annotation
- Refseq: XP_006406547.1 — pentatricopeptide repeat-containing protein At3g18970
- Refseq: XP_010487825.1 — PREDICTED: pentatricopeptide repeat-containing protein At3g18970
- Swissprot: Q9LJ69 — PP243_ARATH; Pentatricopeptide repeat-containing protein At3g18970
- TrEMBL: V4LC70 — V4LC70_EUTSA; Uncharacterized protein
- STRING: XP_006406547.1 — (Eutrema salsugineum)
- STRING: XP_010487825.1 — (Camelina sativa)
- GO:0080156 — Biological Process — mitochondrial mRNA modification
- GO:0005739 — Cellular Component — mitochondrion
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >AA26G00577|Aethionema_arabicum|B3|AA26G00577
ATGCCACGCCCTTTCTTCCACAAATTGATTTTCTCATCTGCTATTCAAGAAAAACGTCTGAGAATTCCAGATAAGTTTGTGAGTAGATTCAAAGATGAGCTATCAGTAGCTGTAGCACTTACAGTACCTGATGGTCATGTATGGCGTGTAGGATTAAGAAAAGCTGATAACAAAATCTGGTTTCATGATGGTTGGCAAGAGTTTGTTGATCGTTATTGCATAAGAATTGGATACCTTTTAATCTTTAGATACGAAGGAAACTCAGCATTTACTGTTTACATTTTCAATTTATCACAATCTGAAATCAATTACCATTCATCAAATCTTATCAACAACATGGATTCATCATCAAATCATCATTTTAACAAACGTCCTCGTCTTTTCGAAGATCTTGAAGATGAAGATGCTGAGGTTGTTTATCCATTATCTATAATCCCAGTGTCTGATTCTAATAAAGGATTTGCTAATTCAGCTATTCAAAGCTTGTTTATTGGATCTAAAGGTGAAGAATCAACACCAAATAATCCAAAAGTATTGAAAAAAAGAGGAAGGAAGAAGAAAAACGCTGTTCCTGAGGAGATGAACTCATCATCTGTTCAAGGATATGATGATCCAGAGAATCGTTCAAAGTTTTATGAAAGTGCTTCTGCAAGGAAGAGAACTGTAACTGCAGAAGAAAGAGAAAGAGCCATTAATGCAGCTAAAACGTTTGAGCCAACGAATCCTTTCTTTAGAGTTGTTCTACGACCATCATATCTATATAGAGGTTGCATCATGTATCTTCCTTCTGGTTTTGCTGAGAAGTACTTAAGTGGGATCTCAGGGTTCATCAAGATTCAATTAGCAGAGAAACAATGGCCTGTAAGATGTCTTTACAAAGCTGGAAGAGCTAAGTTTAGTCAAGGATGGTATGAATTCACTCTAGAGAACAATCTTGGAGAAGGAGATGTTTGTGTGTTCGAGCTGCTCAGAACTAGGGATTTCGTTCTTAAAGAGCAGATGAGCTCTGTTTTAGCTGGATCAAGATTCTTGACTTTGTTGCACCAGAATCAGAAAACGTTAATTCAGACGAAGCAAATTCATGCTCAATTGGTCACTAATGGCTGCCGAGATAATTCTCTTTACGGGAAACTCTTAGGTCATTATTGTTCTTCTACTACCTGGGAAAGTTTAAAGCTTGCGAAATTACTAGTTTTTCCGAGGTTTGATCATCCTGATAAGTTTCTCTTCAATACTTTGCTTAAATGCAGTAAACCAGAAGATTCGATTCGGATTTTCGCTAAGTGGGCAACAAAGAATGCTTTGCTTCTCCATGAACGCACGTTTATCTTTGTGTTTGGGGCTTGCGCCAGGTCAGCATCGTCAGGTTCAGTTCTTTGGTTTGGTAGACAGGTTCATGGAATGGTGATGAAGCATGGATTCTTTTATCAATCTGAGTTGATTGGAACTACTTTAATCCATTTTTACTCCAAAAATGGAGATTTATTTTCTGCACGGAAGGCGTTCGATGAAATGCCTAATAGAACTTCAGTTACATGGAACGCAATGATTGGAGGATACTGTTCACAAAAGGATAAAGGAAATCACTACGCAAGAACGGCTTTAACTCTGTTTCAAACATTGAACGACAATGGAGTTAAACCTACTGATACAACCATGGTTTGCATTCTTTCCGCTATTTCTCAAACAGGATTACTTGAACTCGGTTCTCTTATTCATGGATACATACATAAACTAGGTTTTACACCTGAAATTGATGTCTTTATTGGTACAGCTCTTGTAGACATGTATTCAAAATGTGGCTGCTTAAACAGTGCTTTCTCAGTATTCAATCTAATGACAGTAAAAAATGTCTTAACATGGACTTCAATGGCGACAGGACTAGCTCTCAACGGTAAAGGTCACGAAACACCGAATCTTCTACACCAAATGGCGAAATCAGGTATCAAACCTAACGAAGTAACTTTCACTAGCTTGCTTTCAGCTTATCGTCATATAGGTTTAGTTCAAGAAGGTCTTGAGTTGTTTCAGACAATGAAAACAAGATTTGGTATCACTCCGGTGATTCAACATTACGGATGCATAGTAGATCTACTTAGTAAAGCAGGAAGGTTACAAGAAGCTTATGATTTCATTTTAGCAATGCCTATTAAACCAGACGCTATCTTGTTAAGAAATCTCTGCAATGCTTGCAGCATTCATGGAGAAACAACAATGGGGGAAGAAATTGGGAAAGTTCTTCTCAAGAAATGGTCAGATTCTGTTGTGGAATGTGAAGATTATATTGCTTTATCGAATTTGTTAGCTTCTAAAGGGAAATGGGTCGAAGTAGAATTGCTTAGAGATGAAATGAAAGATAGAAGAATCAAAACAAGACCTGGTTACAGTCTTCTT
Protein Sequence:
- >AA26G00577|Aethionema_arabicum|B3|AA26G00577
MPRPFFHKLIFSSAIQEKRLRIPDKFVSRFKDELSVAVALTVPDGHVWRVGLRKADNKIWFHDGWQEFVDRYCIRIGYLLIFRYEGNSAFTVYIFNLSQSEINYHSSNLINNMDSSSNHHFNKRPRLFEDLEDEDAEVVYPLSIIPVSDSNKGFANSAIQSLFIGSKGEESTPNNPKVLKKRGRKKKNAVPEEMNSSSVQGYDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKIQLAEKQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKEQMSSVLAGSRFLTLLHQNQKTLIQTKQIHAQLVTNGCRDNSLYGKLLGHYCSSTTWESLKLAKLLVFPRFDHPDKFLFNTLLKCSKPEDSIRIFAKWATKNALLLHERTFIFVFGACARSASSGSVLWFGRQVHGMVMKHGFFYQSELIGTTLIHFYSKNGDLFSARKAFDEMPNRTSVTWNAMIGGYCSQKDKGNHYARTALTLFQTLNDNGVKPTDTTMVCILSAISQTGLLELGSLIHGYIHKLGFTPEIDVFIGTALVDMYSKCGCLNSAFSVFNLMTVKNVLTWTSMATGLALNGKGHETPNLLHQMAKSGIKPNEVTFTSLLSAYRHIGLVQEGLELFQTMKTRFGITPVIQHYGCIVDLLSKAGRLQEAYDFILAMPIKPDAILLRNLCNACSIHGETTMGEEIGKVLLKKWSDSVVECEDYIALSNLLASKGKWVEVELLRDEMKDRRIKTRPGYSLL