Gene Details:
- Gene ID: AA124G00010
- Gene Family: B3 Family
- Description: B3 Family protein
- Species: Aethionema arabicum
- Source: B3 family gene from PlantTFDB
Protein Features:
- PROSITE profile: PS50863
- SMART: SM01019
- SuperFamily: SSF101936
- Pfam: PF02362
- Gene3D: G3DSA:2.40.330.10
- InterPro: IPR003340 IPR015300
Annotation Proteins:
- Refseq: XP_013647917.1 — B3 domain-containing protein REM20-like
- Refseq: XP_013647918.1 — B3 domain-containing protein REM20-like
- Swissprot: Q8LAV5 — REM20_ARATH; B3 domain-containing protein REM20
- TrEMBL: A0A0D3CTK8 — A0A0D3CTK8_BRAOL; Uncharacterized protein
- TrEMBL: A0A3P6H7B4 — A0A3P6H7B4_BRAOL; Uncharacterized protein
- STRING: Bo6g067300.1 — (Brassica oleracea)
Gene Ontology:
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature:
Sequences:
CDS Sequence:
- >AA124G00010|Aethionema_arabicum|B3|AA124G00010
ATGGCTAACAATGGCACCCTTCCACGTTTCTTCATAGGTTTCCTCTCAAAAACCTCTTCTGAAAGTCTTGCGATTCCCCTGTCGTTCAACGAACATCTTCGAGACCCATTGCCGTTAACGGCAAAGCTCCAAGGCTGTGGACCAAAAGTTTGGAAAGTAAATCTAAAGAAAACACAGCAATATATCTATTTTACAAATGGGTGGCGATTATTTGCCCAAGAAAACAATTTAACAGACGGTGAGTTCTTAACATTTGTGTATGATGGTTCTCGAACCTTTGAAGTTAGCATATACAACCGTTATGGATGTAAAGAAACCAGAGGTCTAGTGAATCAACAAGACATCATGGACCTTGATGACCAGTGGCGGAGC
Protein Sequence:
- >AA124G00010|Aethionema_arabicum|B3|AA124G00010
MANNGTLPRFFIGFLSKTSSESLAIPLSFNEHLRDPLPLTAKLQGCGPKVWKVNLKKTQQYIYFTNGWRLFAQENNLTDGEFLTFVYDGSRTFEVSIYNRYGCKETRGLVNQQDIMDLDDQWRS