Information report for 913300
Gene Details
Functional Annotation
- Refseq: XP_020872301.1 — B3 domain-containing protein REM8
- Swissprot: Q8H2D1 — REM8_ARATH; B3 domain-containing protein REM8
- TrEMBL: D7MB41 — D7MB41_ARALL; Uncharacterized protein
- STRING: scaffold_701042.1 — (Arabidopsis lyrata)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0000166 — Molecular Function — nucleotide binding
- GO:0003677 — Molecular Function — DNA binding
- GO:0003824 — Molecular Function — catalytic activity
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT4G31680.1, AT4G31690.1, AT4G31640.1
- Brassica napus: GSBRNA2T00130479001, GSBRNA2T00130478001, GSBRNA2T00121031001
- Brassica oleracea: XP_013623376.1, XP_013587747.1
- Brassica rapa: XP_009130066.1
- Raphanus raphanistrum: RrC519_p6, RrC519_p4
Sequences
CDS Sequence:
- >913300|Arabidopsis_lyrata|B3|913300
ATGGCAAATGCATCACCGTTGTCTCGAACAAACCCACACTTCTTCCAGCCTCTGCTTCCAGGTTTCGATAGTCACCTTAACATTCCTGTGAAGTTCTTCTCCGATCACATCAAGGGAAAACACGAGGGAAAGACTGTAAATTTGAGATCAGATGCGTCAGAAAGAACATGGAAAGTGAAGATGGAGGGTAATAGACTCACTAAAGGTTGGAAAGAGTTCGTGAAGGCACATGATCTTCGAGTTAGTGACTTTGTCGTCTTTAGACATGAAGGAGAAATGTTGTTCAATGTCACTGCTTTAGGACCTAGTTGCTGTGAGATTCAATACGCACAGCCTCGCCGCCATGAAGAAGACGAAGAGAGTAACGAAACTGAAATATCTTTAAGATCTGAGAAGGAAGTTGAGGAGAATGTGAAAACAGAATCTGATCAGTCTTCGCCTAATCTCAATTGTTTTAGCCGATCTGTGACAGCTTCAAACCTATCAAGAGATACAGTGGGTTTCCCCATTAATTTCGCTAAGCAAAATGGTTTGAACAAAGAAAGGCAAGAGATATTTTTGATGAACGGAGAAGGAAAGACATGGGAATCAGAGTTAAAGAGATGGGGGGATTGTCGGCTTTCCATTGTTCGAGGTTGGACAAGTTTTTGCACTGCAAATAAACTAGAAGTTGGAGATTCTTGCACATTTAGACTGCTCCAAAAAACGGCGGAAACGCCTGTGTTTCAGCTCTGCAGCAGTACAAAGTCGGAGAGGAAAATCCAGTCCGCGGAAGGTTGCATCGATGACAAAACTGGAGGAAGCCGGTTTGTGAAGTTAACTCCTACACTAAACAGTCTTCACGTTGGTAAACAGCATCTACCGGTAAGTTTCACGAGAGAGAACAGACTCATAAATCCGGGGAAGATAGTTCTGGTGGACAAAAACCGAGCTGAATGGTTGATGGAGCTTAAGGTTGACAAAAGTACTGGTTTGATGTATATTATTAGTGGCAATGGTTGGAAAAAGTTCTGCGCCGCCAATGAAATAAGCGCAGGGGAGTCTCTAATTTTAGAATTGATCCGAGGAGGTGTAACTCCTTTGCTTAAGTTCATCTCCAAGTTGGATCAACCACCATTTGAAGCAGAGGCTCAGGCACACAAGAGAGCTAGAGTCCAAAAATTGAGCCAGGAGACTGAACCGAAGCTTGATATGAGAGAGAAGACAGCTGAAGATAGAGTACCCCCTCGAGCATCTAACAAGTCCAGTGGTAATCAAGAAAACTTGCAGCATACGCAACCTTGCTCTGTCTCAAATCAGTTGGCTAAGGTGAAACAAAGCGTTGTAGATGCTTTAACTAGTATCAGACGTTTTCGGGCAGAGCTCGACACAACGGAACAGAAGCTAGAAATTTCATTGCAGGAAATCAACAAGTTAGGTATGATTTGTATAGCAATCTTTACTTTTAATTTTGGGTCTACTCGGTTCTCTAAAAATTTTGGCACAGAGAGGACAGAAGATAATGGGAATAAAACAACAACTTCAAGTAAACCGGGGGCAACCCTAGCAAAAGATCCGCTAGCATCAGAGAAGCAAAGTACTCTTCCACTTCCAACAAAAGATGGTCTTCCAATAGATATTAATCTCTCCTTCAACATTTACACAGCCGTGAGGAAGCTTCGTACAGCTCTTGCCAGAGAAGGCCCTGATGGTGTCATGGCATATCAGATATTCATGAATTCAACGCTTCAGCAGATAAGCAGGCAAATTCCGAGAACCAAAGAGGAACTCCTCCAAATCAATGGCCTTGTGCAGGCTAAAGTAAGTAAGTACGGTGATCGGTTGTTAGAAACAATAGAAACAACGGTGAACGAGTACTACGGAACCAAAAAGAAAGATCCCATAATCATTCATCAGTAA ATGTCGTCCATGGATTGTTTAAGCAACTTCTTTACTTGGGATCCTCCTATCCAGCTCCAGGATTGTTTTATCCCAGATATGGATATGATTATCCCAGAAACCGACAGTTTCTTCTTCCAGTCTCAACCTCAAATGCAGTTTCATCAGCCATTTGTTCAAGAAGAAGCTCCTTCACAGACCTTTATAGAGCTCACTGACTTTGACTCTTTCTCCGACCAGTTTCTTCCTCCCCAAGAAACCCATCTTCCTTACCCTAAAGCTGAAACTTTCGACGAAATACACTACTTGGATTCCTTCCTTCCCACGCCAAAACGCCAGAAACTTGTTAACTCAAGCTACCACTGTCTAGGAGATCAAGACGGGGCCAAGAAACCAAAGCTTTCATCTCAGAGCATGGCGGCTCGAGAGAGGAGAAGAAGAATTGCTGAGAAGACCCACGAGCTCACGAAACTAGTCCCTGGTGGCCAGAAACTTAACACCGCCGAGATGTTCCAAGCCGCCGCTAAGTATGTCAAGTTCTTGCAAAGCCAAGTTGGCATCCTCCAAATGATGCAGACCACAAAGAAGACGCAGGGTATCACTGATGTGGAAATAGAAACTCAGTTTTTGCTTGAGTCGCAAGCAGTCCAGGAGAAGCTATCAATGAAGGAATTATGTTTGGTTCCATGTGAAATTGTTCGAGATCTAACAAGTGAAGAATCCATTTGGAGAAACCCAAAGATTTCTCGAGAGATCGACAAGTTACTGTCCACAGATCTGGCTAACTAG
Protein Sequence:
- >913300|Arabidopsis_lyrata|B3|913300
MANASPLSRTNPHFFQPLLPGFDSHLNIPVKFFSDHIKGKHEGKTVNLRSDASERTWKVKMEGNRLTKGWKEFVKAHDLRVSDFVVFRHEGEMLFNVTALGPSCCEIQYAQPRRHEEDEESNETEISLRSEKEVEENVKTESDQSSPNLNCFSRSVTASNLSRDTVGFPINFAKQNGLNKERQEIFLMNGEGKTWESELKRWGDCRLSIVRGWTSFCTANKLEVGDSCTFRLLQKTAETPVFQLCSSTKSERKIQSAEGCIDDKTGGSRFVKLTPTLNSLHVGKQHLPVSFTRENRLINPGKIVLVDKNRAEWLMELKVDKSTGLMYIISGNGWKKFCAANEISAGESLILELIRGGVTPLLKFISKLDQPPFEAEAQAHKRARVQKLSQETEPKLDMREKTAEDRVPPRASNKSSGNQENLQHTQPCSVSNQLAKVKQSVVDALTSIRRFRAELDTTEQKLEISLQEINKLGMICIAIFTFNFGSTRFSKNFGTERTEDNGNKTTTSSKPGATLAKDPLASEKQSTLPLPTKDGLPIDINLSFNIYTAVRKLRTALAREGPDGVMAYQIFMNSTLQQISRQIPRTKEELLQINGLVQAKVSKYGDRLLETIETTVNEYYGTKKKDPIIIHQ*