Information report for 913296
Gene Details
Functional Annotation
- Refseq: XP_002867283.1 — B3 domain-containing protein REM7
- TrEMBL: D7MB37 — D7MB37_ARALL; Uncharacterized protein
- STRING: scaffold_701038.1 — (Arabidopsis lyrata)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00021880001, GSBRNA2T00099812001, GSBRNA2T00068700001, GSBRNA2T00077744001, GSBRNA2T00000337001
- Brassica oleracea: XP_013623120.1, XP_013623119.1, XP_013598970.1, XP_013598969.1, XP_013623121.1, XP_013624170.1
- Brassica rapa: XP_009108912.1, XP_009138031.1
- Raphanus raphanistrum: RrC282_p1, RrC6137_p2
Sequences
CDS Sequence:
- >913296|Arabidopsis_lyrata|B3|913296
ATGGTGAATCATCCACTTCAGTCTCCGGCCAATCCACATTTCTTCCAGCCACTTCTTCCCGGTTCCGAGACTCACCTCTCAATACCTGTTACATTCTTCTCAAAGCACATTGAAGGGAAAAACGAGCAGAAAACGGCGAGACTTATATCGGACGCTTCTGATAGAATTTGGCAAGTGAAAATGGATGGCCGGAGACTCACTGAAGGCTGGAAAGAGTTTGCAACAGCACATAATCTTCAAATCGGCGACATCATTATTTTCAAACACCAAGGGGACATGTTGTTTAGTGTGACACCTTTCGGTCCTAGTTGCTGTGAAATTCAGTACGTACAATGTCTCATCAAAAAGGAGGACGACAATGTCCATGACGATGAAGACGACATGGAGAATCAGCACAACTCTAGAAAGGGTTTAAGGCAGAAGAATCTGAAACCCAAAACAGAGCTAAAATTATCTTTATCATACGATTACTGTTTTGTAGCAAACGTCACTGCTTCAAACCTAAAATTTGACACAATGAATCTTCCAAAGAAAGCTTCTAGCTCCAAAGCTTTGAACAAGAGATGTCACAAGATAATTTTAGTGAACAAAGAGGGAAACTCTTGGACATTGAATTTGAGATTTAGAGAATCAGAAGGAAGTTATTACATTAGAGGAGGCTGGAAAAGATTCTGTTCTGAAAACAGACAAAAAGAAGGAGATTTAATCACGTTTAATCTAGTTGGAGACGGGAGATCTACTCCAATGCTCTGTATCTGTCCAGAAGAAGCATGTTCGGAGCTAATGGGCATAGCGAGAGGGAAGAAAAAGACGAAGAAGCGTCGTATGTGGGTAGCTTCATCATCTTCAAGACAAAACAGCTTCGTCACACTCAGTCTCACAGCTTACAATATCAAATACTCCAAAATTAATCTTCCGGTAGAATTCACAAAGATCAATGGCATTACCAGAAAGCACGAGAAGATCATTCTGATGGATAAACATGGTGTGAAGCGGTTAACGAGGTTGGTGCACGATGGACCAAACTATGGAAGAAGAGGATTGGGAAAAGGATGGAAACTTTTCTGTGAAGCTAATGATGTACTGAAGATAGGCGAGCCTTTTAAGTTGAAGCTGACTTGGGAAAATAATACTCCTCTCCTTAGGTTTTGCTCTAAGGTCAAGGAGGAACCAATCTATGTCTGA ATGGCTTCCTCGAATAGACACTGGCCAAGCATGTTCAAATCCAAACCTCATCACCATCAATGGCAACACGACATCAACTCTCCTCCCTTGCCTTCTTCTGCTTCCCACCGATCTTCTCCCTTCTCAGGGTGTGAGGTGGAGAGGAGTCCAGAGCCAAAACCAAGATGGAATCCGAAGCCAGAGCAGATTCGTGTACTTGAAGCAATCTTCAACTCAGGGATGGTGAATCCACCAAGAGAGGAGATTCGAAGGATTAGGGCTCAGCTTCAAGAATACGGCCAAGTTGGTGACGCCAACGTCTTCTATTGGTTCCAAAACCGCAAGTCTCGTAGCAAATACAAACTACGCCTCCTCCATAAACACTCCCTCTCTCAACCCCAACCCCAACCTCAACCGCAGCCTTCATCTTCCTCATCATCTTCCTCCAAGTCTACCAAACCCCACAAAAACAAGGACAAGAACAACACTAATCTCTCTTTGGGTGGTGGTCAAATGATGGGGATGTTTCCATCGGAAGATGCGTTTCTTTTCCCGGTTTCCACCGTCGGAGCGTTTGGAGGTATCACCGCCTCATCCCAATTAGGATTTCTCTCCGGTGATATGATTGAGCAACATAAACCGGCTCATCCAACGGTGGAACAATGTACCGGATATCTCTTGAGCGAGATCATGAACGGTAATGCTAGTTATGGAACTCATCATCAACAGCACTTGAGTGATAAAGAAGATGAAGAAATGAGTATGAAGATGTTGCAGCAGCCACAACCTTACGCTGCTACAAGTCATCAAATCACTTCTTACAACAACAACAACAACATCATTCTTCATGTTCCTCCAATTACTCCAACTACTTCAACTACTACTACTACTAGTACTACAACCTCAGATCCTCTTGATATTGTATTATCAACTTCGGACCAGCTTCAAGTTCAAGCAGTGTGCACGAGAATAAGGGTGTTTATCAACGAAATGGAGTTTGAAGTGAGCCCCGGACCGTTCAATGTGAGAGATGCATTCGGAGAAGAGGTTGTTCTCATCAATTCTGCGGGTCAGCCCATTGTCACTGATGAATATGGCGTCGCACTTCAGCCTCTTCAACATGGAGCCTCCTACTATCTGATCTAG ATGTCTGATTCCGATATGGACATTGACGATGATGACGTCCAAGTACATGTACAGCGTACAATTGCGGGAGACTCTGGATTGCTGCTCGCTAAACCTTCCGATTCCCAATCCCGGAACGATGTGAAGAAGCATTTAGATGAGAACAGTGGGAAGAATAATACTATGCTGGGAGAAGCAAAAGACATGCTTTTGTCAAGGTTTCCTGCTCCGGCGCCAAGCTTTCCTTTGGTGAATGGACCAGAACAGAAACGTGCATCACTTCCCTGCAAGTTTTTTGGTCAAGGGTGGTGTGATAATGGGATCTCCTGCAGGTTTCTTCATGTGAAGGAGAACATGAATGGCACTAGCCAGCAACAGTGGGGGAATCATATGGCTGGAACCAGTGGTATCCAGTCTGTTGAAGGCGAAAATGGTGTAGCATCTTTGGTGAATCCATCAGGTGGTCACGAGATACTCTTTGTGCCTTCATTGGGAAACATGGAAATGGAAAGAGGGAGTCTACCAAAGGGTGGTGCTGTTTTCACTGAGGACAGGCCTGTGTTTGTTAATAGCACTAGTTCCTTCCCATTGAAAAGCAGCTTTGTTCAAGAACATGGAGCTTCTATCACTTCCTATGGACAAACAGACATGGGATCTTCTGCACCTGCCTGGACAGGGTCATTGTTCAGTTCTACTCCTATGAATCAGTATGCTTCTAAATTGGGGAACTGTGAAAACATGAATGATAAAAATGGATCTGGATCACTACCGATGGTGCAAGCTATATCTGTTTCATCCGTTCAAGATGCAGAAGGCGACAGGACTAGCAACAACAAGAAAGTTTATTCACATGATTGGGAACCTTCTGAACCTTTTCGAGCATCTTTCACAATTCCACCTTATATACTTCCCTCCTCTGATGCCCTCTACGATCCTTTCACGGATATAGAGAATCCACAAGACAGATCTCTTACTGCTCCATTGTCAAGTAAAGGGAGATATGCACAGAAAAAGTCCAGCCAGCAGAAAGATGATGAATCTGCTAGTGATAATAAAAACAGTTCATGTAGCAATAATCAGTATCAAGAATCTATGGCGACGAAGAATTTGGAAGCACATGGAGTGGTGGAGGGGGTGGCTACTTCGGTTGTTGATCAAAATGATGAAACAACACCAAGCAAAGAAGTTTCTGCAGAGAATAGATCTGTTTTAAAAAGAAGCAAACCTGCGGGGCACGGATCTTGGCGTAGAAGTGACGGCTCTTCGCATCAAAAGGTGTTGAAATCAGATGAGAGAGATGGTGAAGCGAGGTCAGACGCAGGGACCAAAGCAATGAGACAGTTCCGGACCGCAGTTGTGGAAACCATCAAAGAAATGGTGAAACCGTTGTGGCGCGAAGGCCGTCTTACCAAAGAAGTGCATAACATGGTAGTTAAAAGAGCTTCTGAAAAGATAGTCAGTGCTGCTGTCCAGTCCCATCAGGTGCCGACTGACTCAGCATTCGTTGATCAGTATCTTAGTATGTCTGCAACGAAGATTGTGAAGCTTGTTGAGGCGAGTCTCTTCTTAGACACTTCAGTAAAAAAACTTAGTAAAGTCTTGCATTAA ATGGCTTCCTCGAATAGACACTGGCCAAGCATGTTCAAATCCAAACCTCATCACCATCAATGGCAACACGACATCAACTCTCCTCCCTTGCCTTCTTCTGCTTCCCACCGATCTTCTCCCTTCTCAGGGTGTGAGGTGGAGAGGAGTCCAGAGCCAAAACCAAGATGGAATCCGAAGCCAGAGCAGATTCGTGTACTTGAAGCAATCTTCAACTCAGGGATGGTGAATCCACCAAGAGAGGAGATTCGAAGGATTAGGGCTCAGCTTCAAGAATACGGCCAAGTTGGTGACGCCAACGTCTTCTATTGGTTCCAAAACCGCAAGTCTCGTAGCAAATACAAACTACGCCTCCTCCATAAACACTCCCTCTCTCAACCCCAACCCCAACCTCAACCGCAGCCTTCATCTTCCTCATCATCTTCCTCCAAGTCTACCAAACCCCACAAAAACAAGGACAAGAACAACACTAATCTCTCTTTGGGTGGTGGTCAAATGATGGGGATGTTTCCATCGGAAGATGCGTTTCTTTTCCCGGTTTCCACCGTCGGAGCGTTTGGAGGTATCACCGCCTCATCCCAATTAGGATTTCTCTCCGGTGATATGATTGAGCAACATAAACCGGCTCATCCAACGGTGGAACAATGTACCGGATATCTCTTGAGCGAGATCATGAACGGTAATGCTAGTTATGGAACTCATCATCAACAGCACTTGAGTGATAAAGAAGATGAAGAAATGAGTATGAAGATGTTGCAGCAGCCACAACCTTACGCTGCTACAAGTCATCAAATCACTTCTTACAACAACAACAACAACATCATTCTTCATGTTCCTCCAATTACTCCAACTACTTCAACTACTACTACTACTAGTACTACAACCTCAGATCCTCTTGATATTGTATTATCAACTTCGGACCAGCTTCAAGTTCAAGTGTGCACGAGAATAAGGGTGTTTATCAACGAAATGGAGTTTGAAGTGAGCCCCGGACCGTTCAATGTGAGAGATGCATTCGGAGAAGAGGTTGTTCTCATCAATTCTGCGGGTCAGCCCATTGTCACTGATGAATATGGCGTCGCACTTCAGCCTCTTCAACATGGAGCCTCCTACTATCTGATCTAG ATGTCTGATTCCGATATGGACATTGACGATGATGACGTCCAAGTACATGTACAGCGTACAATTGCGGGAGACTCTGGATTGCTGCTCGCTAAACCTTCCGATTCCCAATCCCGGAACGATGTGAAGAAGCATTTAGATGAGAACAGTGGGAAGAATAATACTATGCTGGGAGAAGCAAAAGACATGCTTTTGTCAAGGTTTCCTGCTCCGGCGCCAAGCTTTCCTTTGGTGAATGGACCAGAACAGAAACGTGCATCACTTCCCTGCAAGTTTTTTGGTCAAGGGTGGTGTGATAATGGGATCTCCTGCAGGTTTCTTCATGTGAAGGAGAACATGAATGGCACTAGCCAGCAACAGTGGGGGAATCATATGGCTGGAACCAGTGGTATCCAGTCTGTTGAAGGCGAAAATGGTGTAGCATCTTTGGTGAATCCATCAGGTGGTCACGAGATACTCTTTGTGCCTTCATTGGGAAACATGGAAATGGAAAGAGGGAGTCTACCAAAGGGTGGTGCTGTTTTCACTGAGGACAGGCCTGTGTTTGTTAATAGCACTAGTTCCTTCCCATTGAAAAGCAGCTTTGTTCAAGAACATGGAGCTTCTATCACTTCCTATGGACAAACAGACATGGGATCTTCTGCACCTGCCTGGACAGGGTCATTGTTCAGTTCTACTCCTATGAATCAGTATGCTTCTAAATTGGGGAACTGTGAAAACATGAATGATAAAAATGGATCTGGATCACTACCGATGGTGCAAGCTATATCTGTTTCATCCGTTCAAGATGCAGAAGGCGACAGGACTAGCAACAACAAGAAAGTTTATTCACATGATTGGGAACCTTCTGAACCTTTTCGAGCATCTTTCACAATTCCACCTTATATACTTCCCTCCTCTGATGCCCTCTACGATCCTTTCACGGATATAGAGAATCCACAAGACAGATCTCTTACTGCTCCATTGTCAAGTAAAGGGAGATATGCACAGAAAAAGTCCAGCCAGCAGAAAGATGATGAATCTGCTAGTGATAATAAAAACAGTTCATGTAGCAATAATCAGTATCAAGAATCTATGGCGACGAAGAATTTGGAAGCACATGGAGTGGTGGAGGGGGTGGCTACTTCGGTTGTTGATCAAAATGATGAAACAACACCAAGCAAAGAAGTTTCTGCAGAGAATAGATCTGTTTTAAAAAGAAGCAAACCTGCGGGGCACGGATCTTGGCGTAGAAGTGACGGCTCTTCGCATCAAAAGGTGTTGAAATCAGATGAGAGAGATGGTGAAGCGAGGTCAGACGCAGGGACCAAAGCAATGAGACAGTTCCGGACCGCAGTTGTGGAAACCATCAAAGAAATGGTGAAACCGTTGTGGCGCGAAGGCCGTCTTACCAAAGAAGTGCATAACATGGTAGTTAAAAGAGCTTCTGAAAAGATAGTCAGTGCTGCTGTCCAGTCCCATCAGGTGCCGACTGACTCAGCATTCGTTGATCAGTATCTTAGTATGTCTGCAACGAAGATTGTGAAGCTTGTTGAGGGTTATGTCGAAAAGTATGGTAAACCTAAACCATAA ATGGCGGAGTCCGGGGCTCCGGGAACGCCGGAAAGCGGGCACTCCGGCGACCACGGCGGGCCGTCGGGCGGAGCGAAGGAGCAGGATCGGTTCCTCCCGATCGCGAATATTGGGAGGATCATGAGGAAGGCGATACCGGAGAATGGCAAGATCGCTAAGGACGCCAAGGAGTCCGTCCAGGAGTGCGTCTCCGAGTTCATCAGCTTCGTCACTAGCGAGGCGAGTGATAAGTGTCAGAGGGAGAAGAGGAAGACGATCAATGGGGATGATCTGCTATGGGCGATGGGGACGCTGGGCTTCGAGGATTACGTGGAGCCACTCAAACTCTACCTGCAGCTCTATAGAGAGATGGAGGGGGATAGCAAGGGTTCCCGTTCTGCAGATCAATCTGGAAAGAAAGATGGTGCAATTAACGGGGATCTGGGGGCTTCGTACAGTGGTATGTAG
Protein Sequence:
- >913296|Arabidopsis_lyrata|B3|913296
MVNHPLQSPANPHFFQPLLPGSETHLSIPVTFFSKHIEGKNEQKTARLISDASDRIWQVKMDGRRLTEGWKEFATAHNLQIGDIIIFKHQGDMLFSVTPFGPSCCEIQYVQCLIKKEDDNVHDDEDDMENQHNSRKGLRQKNLKPKTELKLSLSYDYCFVANVTASNLKFDTMNLPKKASSSKALNKRCHKIILVNKEGNSWTLNLRFRESEGSYYIRGGWKRFCSENRQKEGDLITFNLVGDGRSTPMLCICPEEACSELMGIARGKKKTKKRRMWVASSSSRQNSFVTLSLTAYNIKYSKINLPVEFTKINGITRKHEKIILMDKHGVKRLTRLVHDGPNYGRRGLGKGWKLFCEANDVLKIGEPFKLKLTWENNTPLLRFCSKVKEEPIYV*