Information report for 88108
Gene Details
Functional Annotation
- Refseq: XP_024528329.1 — B3 domain-containing protein Os07g0563300 isoform X2
- TrEMBL: D8R9Q1 — D8R9Q1_SELML; Uncharacterized protein HSI2-1
- STRING: EFJ30938 — (Selaginella moellendorffii)
- GO:0010030 — Biological Process — positive regulation of seed germination
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:2000034 — Biological Process — regulation of seed maturation
- GO:0005634 — Cellular Component — nucleus
- GO:0005739 — Cellular Component — mitochondrion
- GO:0003677 — Molecular Function — DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >88108|Selaginella_moellendorffii|B3|88108
ATGGAGCCCACACGGCACAAAGCGTGCATGAATGTCAGATGTGAGGCGATCGAGAGCGCAGCATGGAAGCGAGGATGGCGGCTCCGCTCCGGCGACCGAGCTGATTTATGCACAGACTGTGGTTCGGCGTTTGAGCTGTCACGCTTTTGCGAAAAGTTTCATGCGTATGATCCCGGGTGGAGAAGTTGCATTGCGTGCGGAAAGGGTCTCCATTGTGGATGTATAGCTTCCATTCATCTTTTTGTGCTTTTGGATACGGGAGGAGTTTCCTGCCGAGGTTGTGTCGATCTTAGAGAGTCTCGCAACGTGGTGCGTAGCTTCTTTTTTCTTTTTTCTGATTTTCCATTTGACTTAGGAAAGGAACAGGAAGAAAACCTTATTCTCAAGCCAAAGTCTGAAGTAGATTTTGAGCAGAAAATGGCGGCGACTGGTAGCGAAGACGAAAAGGTTAGAGGTGTCGCAGAGGAATTGTCGGCAAAACGGGAAGTTACTTACATGGAAGAGATGGAAAAGCTAGCGGTTACAAGGGAATCACCTGGAACTCAAACCGAGGTGGCGAGCCTGAATACCTCTTTAGGCTTGGGGATGGGGATAAAAGTTGATGACACAGCAGCTGGTAATCTTTTCCAAACGGAAAGTCCAGCTTCAGGTGGCGAAGCCAAGGAAAATCCTTCGAAGTATTCACCGATTCCATATCGACCACGACATCGGCAGGTTGGGAAGCAACCAGTTCCACCGCGTGTTCCGCTCTCAGGGGCTGCACCTGAACCAACTAACGACCCGAGAGTTGCACGTCCTCCTGCTGATAGTAAAGGGAGGAACCAGCTTTTGCCTCGCTACTGGCCTCGGATTACAGACCAGGAAATTCAACAGTTCACTTCTGGAGACTCTAAAATTACACCCCTGTTCGAGAAAGTACTCAGTGCCAGTGACGCTGGACGTATTGGACGATTGGTTCTTCCAAAAGCATGTGCGGAGGCGTATTTTCCCACGATTTCACAAGCTGAAGGCCTTCCGCTAAGAATTAATGACATCAGTGGGAGGGAGTGGCAATTCCAGTTCCGTTTCTGGCCAAATAACAACAGTCGCATGTATGTACTAGAAGGTGTTACACCATGTATACAGGCTATGCATCTCCAAGCCGGTGACACAGTCACTTTCAGCCGTCTAGAACCAGAAGGAAAACTTATAATGGGATATAGGAAGGCACAGGATTCTGGGGACAGTGAGTACCCCGGTGCTAAACAGACAGATTACAAATCAAAAGCTAAGGAAACTCAATCAACTCTTTCAGCGGATAAAAGAAGGGGTCGGCCTCTAGGAGCAAAGAGCAAGAGACTTCGTCTAGATAGTGAAGACTCATTGGAGTTGAAGACAAGCTGGGAAGAAGCTCAGGAGTTGTTAAGACCGCCTCCCGGGGTCACGCCCAGCTTCGTCACTATCGACGGCCATCAATTTGAAGAGTACGAGGAGCCTCCTGTTCTTACGAAGAAAACGGTGACGAGGACCAAACCTTCGGGGGAGCAAGACCGCTGGGTGCAATGCGATGATTGTGCAAAGTTTAGGCGGGTTCCTCTTGACATATTTATACACACAAGATGGACTTGTACCGACAACGTCTGGGACTTGAAAAGAGCAAACTGTAGTGCCGCGAAGGAGCTCAGCAACGAAGACATGGACCAGCTCATGGACAGTATGTCAGGTAAAGCCCAGCAACGAATCTCGCCATCGGGATTGGATGCCTTGGCAACCGCTGCGGCATTTGGCGACGAGAAGGCAGCATCTCCTCCGCCACCAGCTGCGACAACAAAGCATCCCCGCCACCGTCCGGGTTGTACATGCATCGTCTGCATCCAGCCTCCCAGCGGCAAGGGTCCCAAGCACAAGCCGACGTGCGTGTGCAACGTCTGCCTGACCGTGAAGCGGAGGTTCAAGACGCTGATGATGAGGCGGAAGAAGCGGCAGTCGGAGCGCGAGGCGGAGACGGCGCGGAAGAAGAAGGCGTGGGACAAGGACGACGGGGCTGAGAGTGCCAAAAGCCACGAGCGTCGTGACGACCCTGCTGTCGCTGTAAACCTGGATGCCCATGACTGGCATGCGAGGGAAAAGCATTGCCCTTCGGTAGCGGACCAGGCGTCGCGGAGCCAGTGTGTCACCGCGTGCAATGTCCCAGGGGCGGAAGGTCGAAGAGAAGAGCGCCGCAAAGACATTTGGATGCTTCTTCCTGAGGTGGCACTGAAAAAGAAATGCCTCATGTTAGTAACGGGCGACAAGACGTATCGAGTTGTTACTCACAGCTTGGAGCACATCTGGACAACGAGTGCTCTTGCAAATCAAAGGCACCCGCTCTTGTCCCAGTCGAGAAAGAGAAGCAGCATGCTGATAGGACTCTGCAAGCATTCTTGTGAGTACGAAGGCGCTGGAGAAACGTCTTTCGTGTTATACTACCTTCAGGGCTGTCAACAATCGCCGTAG
Protein Sequence:
- >88108|Selaginella_moellendorffii|B3|88108
MEPTRHKACMNVRCEAIESAAWKRGWRLRSGDRADLCTDCGSAFELSRFCEKFHAYDPGWRSCIACGKGLHCGCIASIHLFVLLDTGGVSCRGCVDLRESRNVVRSFFFLFSDFPFDLGKEQEENLILKPKSEVDFEQKMAATGSEDEKVRGVAEELSAKREVTYMEEMEKLAVTRESPGTQTEVASLNTSLGLGMGIKVDDTAAGNLFQTESPASGGEAKENPSKYSPIPYRPRHRQVGKQPVPPRVPLSGAAPEPTNDPRVARPPADSKGRNQLLPRYWPRITDQEIQQFTSGDSKITPLFEKVLSASDAGRIGRLVLPKACAEAYFPTISQAEGLPLRINDISGREWQFQFRFWPNNNSRMYVLEGVTPCIQAMHLQAGDTVTFSRLEPEGKLIMGYRKAQDSGDSEYPGAKQTDYKSKAKETQSTLSADKRRGRPLGAKSKRLRLDSEDSLELKTSWEEAQELLRPPPGVTPSFVTIDGHQFEEYEEPPVLTKKTVTRTKPSGEQDRWVQCDDCAKFRRVPLDIFIHTRWTCTDNVWDLKRANCSAAKELSNEDMDQLMDSMSGKAQQRISPSGLDALATAAAFGDEKAASPPPPAATTKHPRHRPGCTCIVCIQPPSGKGPKHKPTCVCNVCLTVKRRFKTLMMRRKKRQSEREAETARKKKAWDKDDGAESAKSHERRDDPAVAVNLDAHDWHAREKHCPSVADQASRSQCVTACNVPGAEGRREERRKDIWMLLPEVALKKKCLMLVTGDKTYRVVTHSLEHIWTTSALANQRHPLLSQSRKRSSMLIGLCKHSCEYEGAGETSFVLYYLQGCQQSP*