Gene Details:

  • Gene ID: 678461862
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Utricularia gibba
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_011077827.1  — B3 domain-containing protein At2g36080 isoform X1
  • Refseq:  XP_011077828.1  — B3 domain-containing protein At5g06250 isoform X2
  • Swissprot:  Q9FNI3  — Y5625_ARATH; B3 domain-containing protein At5g06250
  • TrEMBL:  A0A164WKJ8  — A0A164WKJ8_DAUCS; Uncharacterized protein
  • TrEMBL:  S8CA51  — S8CA51_9LAMI; Uncharacterized protein (Fragment)
  • STRING:  Migut.J00664.1.p  — (Erythranthe guttata)

Gene Ontology:

  • GO:0003677  — Molecular Function — DNA binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >678461862|Utricularia_gibba|B3|678461862
    ATGTCTGTCAATCACTACTATTCGGAACTTCCAGACGCCGCCGATGGGTGCTGGCCAAACTCCCTCACGGAGTCTCCGCCACCCAATCACGACCGCCGCTTCCTCGTCCCCGCCGGAGGAATATTCTGCCTGCAAACAACCACGCCTGCGCCGCCCCCTTTCGCCTTCAATCTCAACCTCAACAATGATGAAGACGAAGAACTGGACAAAAACAGCAACTACGACGCCGCCGCGACGGAGGAATGGTTGCGCGACAGAGAGATGTTGTTCGAGAAGCCATTAACGCCGAGCGACGTCGGGAAACTCAACCGTCTCGTGATCCCGAAACAGTATGCCGAGAGGCATTTTCCGATGAACTGCGGCGGTGAATCCTGTGAAAATGGACTTCTCTTAAACTTCATGGACGAAATAGGGACAACATGGAGATTTCGTTACTCTTACTGGAACAGCAGCCAGAGCTACGTTTTAACAAAGGGATGGAGCCGTTTCGTGAAGGAGAAACGTCTCGACGCCGGTGATGTAGTTACCTTTTCTCGCCACCGCGCATCCACGGGCAGCTTATTCATTGGATGGCGGCGGAGGAACCAGATCGCCGCTGCGAGTGGGGATGGCAGGGGATGGAACAGGGAAAACTCCGGTCAACCCAAAAATCCAGGCCCTCCTACCGGATATGATGAGTTTCTCGGAGGAAACAAGCACAAGGGACTGTTTATCAGGACGGAGAGATGA
Protein Sequence:
  • >678461862|Utricularia_gibba|B3|678461862
    MSVNHYYSELPDAADGCWPNSLTESPPPNHDRRFLVPAGGIFCLQTTTPAPPPFAFNLNLNNDEDEELDKNSNYDAAATEEWLRDREMLFEKPLTPSDVGKLNRLVIPKQYAERHFPMNCGGESCENGLLLNFMDEIGTTWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVTFSRHRASTGSLFIGWRRRNQIAAASGDGRGWNRENSGQPKNPGPPTGYDEFLGGNKHKGLFIRTER