Information report for 676783422
Gene Details
Functional Annotation
- Refseq: XP_010419317.1 — PREDICTED: F-box protein At3g62230-like
- Swissprot: Q9M1Q1 — FB215_ARATH; F-box protein At3g62230
- STRING: XP_010419317.1 — (Camelina sativa)
- GO:0048235 — Biological Process — pollen sperm cell differentiation
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT2G24680.1, AT2G24680.2
- Brassica napus: GSBRNA2T00048158001, GSBRNA2T00082319001, GSBRNA2T00013607001, GSBRNA2T00048159001
- Brassica oleracea: XP_013632079.1, XP_013632078.1, XP_013633252.1, XP_013632081.1
- Brassica rapa: XP_009140576.1, XP_009140573.1, XP_009117103.1
- Raphanus raphanistrum: RrC25277_p1
Sequences
CDS Sequence:
- >676783422|Sisymbrium_irio|B3|676783422
ATGGATCAAATAAGATATCCGCACAAATTATGTAGTTTACCCGATTTAGTTTTGGTTCTGATCATCTCTGTCTTGCCCTTCAAGGAAGCTGTTCAGACAAGTGTTCTCTCTAAGCGTTGGAGGAATCTCTGTCATCAGACGACCAACATCACTTTCAAAGAGTCAGAATATGTGAAATATTCTGTCTCAGACGCTGAAGAGACCAAAAGGGCTGCTAGGGCTTCGTTCGTTCGCTTCATGCTTAGATGGGCTTTGAGATTTTCCGGTGAGGCCATTGGTAGTTTCCATCTCTATATATCGAAACCAGAGGGTTTCGAAACAGATATACAAACACTAATCGGATTCGCAGTGGCCAAACGAGTCAAGAACCTAGTTCTTGATTTTTCAGATCCTTCTTGGATCACCAATGAAGAAGCAGCATACGAAGCAAATGTGATTCAATTGCCGGACTGCTTTTACAAGCTAACCAGCCTGGAGTCACTGAAGCTGTTCGCATGCGGGTTTGATCCAGCACAGCTCGAGGAACCGGGTACGCTAAAAATTCTCTCTTTTGGTTGGATCCATCTCAGCATGATCATGTCCTTGCTATCCAAGTCTCCTATTCTCGAGAGTCTAAGCATTCAAAATTGCTGGGACGTTGATCTCGGGATAACCGGATATAACAACCGGTTAAGAGAAATGGTGTTCGAGAATTGTGAGTTCGTCGAGGAATTTTCTACACATGACTTGCCCAATATTCAGATCTTCAAGTACTCAGGAAATGTTCATTACCTTGAGTTCATGAGAGTAAATAGGATGATGAAAGAAGCATACTTGGATTTTGGGGTGGAGAAAGAGTACGAGGAATCCACAGGAACATTTCTTGCTGGTCTCCTTAACGAACTCTTGTCGGCCAAGAAACTGACAATCTGTCCTTTTCTCATCCAACTGATTCAAGATAGTGAGGATCCGGTTCGTCTAGATGCACCGATGGAGACAAAACATCTGGTGATGAAGACGAGTCTGCTTCCCAATGAGTTCATTGGGATTAGGCTCATGATCAACAGCTGTCCAGAGTTGGAAACGCTCACTTTCCAAATGGTTGCTCCTAGACCTGTCTCAATGACGGCTTCTGCGATTGATCCACAAACTTATTGGGCGTTTAGAATCAACCATATGTGTTTGAAGAAGACGTTGAAGGTTGTGGAGTTCAAGGGTTTTAGTGGCAGCTTGTACGAGTTGCATGTGTTGAAGTTTCTGATTCGTTCCGGCCATGTGTTGGAAAGGATTGACCTTTACTTACCCACTGAATTGGAGGACGACAGGCGAAGGATTATGGCTCGTGTTGTTGGTGAGGAGTTCCAGCCAGCGTCTGAGCGTTTAAGGATGTTCGATCATTTTAATGCGACGATGAGCAACTCAAAAACCAAAACTGATTCTTCTTCATCAGACCACTCTTCTCGTGTGGCTCTTATTACCGCTTCGAATCTGCGCAAAGATACTATGTGTGTTCCACAAGTTTTATGTCCCACAGAACCTATCAATGCTGGAACACAAAGATACAATAACAAGAAAGAGTACTGTATGGACCTGGAGAAAAAGAAAAAGCGGGGACGTCCTCCAACATCACTAAGCCAAAAGCAGTTTATGACCTTAAGAATTTCACATAACAGCCTCACAATAGGTGTACAGTATCTTTCAGTGCCATTTATGAGAGAAAATGGCATGAACAAACCAGGGCTGTTAATGTTGGTTGGAAGAGATGGTGTAAAGTGGAAAGTGAACGCTAGGGAGGAAAACAAGGGAAAAGCACTGTGTTTGACTATGGGATGGAAAGAATTTGCGATGGCAAATGAGTTAAAGACAGGTGAATACGTCACCTTTGAGTTTGTCTGCGATAACGGAAATCAGATGCTCAGGTTGGTCAACATAGGGTCTACCAGTGATAGAAGGCAGATAGGAGAGTCTTCAAAAGCCATGGAGAAAGAGTTTTCTTCCTCCGAAACTTGCAACATAAACCAAACCAATAGAGAAAAAAACAACAAAGACGAGGGGCATTCTAATACATCTTCACTAGTCCAAAACGGAACTGCGATCTTAGAACCTGTAGCTGACAATGTCAAAGCCGGTACATTGTGTCTTCCACAAGCTTTATGCCCCACAGAATCTATCAGTGATGGAACAAAAGGAGACAGTGACAAGATGAAGAAGCGGGGACGTCCTCCAAATTCACTAAACAAAAAGCAGTTTATGACCTTAAAATATCTTTCATTGTCATTTATGAAAGAAAATGGCATGGCCAAACTAAGGTTGCTAACTTTGGTAGGAAGAGATGGTGTAAGGTGGCAAGTGAAACTTAAAGAGGAAAAAAGCGGAAGGCTGTGTTTGGGAAGGGGATGGAAAGAATTTGCGACGGCAAATGGGTTAAAGAAGGGTGAATACTTTACCTTTGACTTTGTATGCGAAAACGGAATTCGGATGCTCAGGTTGGTCTACACAGAGTTTACCAGTACTGATAGAAGGCAGACAGGAGAATCTTCATCAAAAGCCAAGAAGAAAGAATTTTTTTTCCATCGAACCTAG
Protein Sequence:
- >676783422|Sisymbrium_irio|B3|676783422
MDQIRYPHKLCSLPDLVLVLIISVLPFKEAVQTSVLSKRWRNLCHQTTNITFKESEYVKYSVSDAEETKRAARASFVRFMLRWALRFSGEAIGSFHLYISKPEGFETDIQTLIGFAVAKRVKNLVLDFSDPSWITNEEAAYEANVIQLPDCFYKLTSLESLKLFACGFDPAQLEEPGTLKILSFGWIHLSMIMSLLSKSPILESLSIQNCWDVDLGITGYNNRLREMVFENCEFVEEFSTHDLPNIQIFKYSGNVHYLEFMRVNRMMKEAYLDFGVEKEYEESTGTFLAGLLNELLSAKKLTICPFLIQLIQDSEDPVRLDAPMETKHLVMKTSLLPNEFIGIRLMINSCPELETLTFQMVAPRPVSMTASAIDPQTYWAFRINHMCLKKTLKVVEFKGFSGSLYELHVLKFLIRSGHVLERIDLYLPTELEDDRRRIMARVVGEEFQPASERLRMFDHFNATMSNSKTKTDSSSSDHSSRVALITASNLRKDTMCVPQVLCPTEPINAGTQRYNNKKEYCMDLEKKKKRGRPPTSLSQKQFMTLRISHNSLTIGVQYLSVPFMRENGMNKPGLLMLVGRDGVKWKVNAREENKGKALCLTMGWKEFAMANELKTGEYVTFEFVCDNGNQMLRLVNIGSTSDRRQIGESSKAMEKEFSSSETCNINQTNREKNNKDEGHSNTSSLVQNGTAILEPVADNVKAGTLCLPQALCPTESISDGTKGDSDKMKKRGRPPNSLNKKQFMTLKYLSLSFMKENGMAKLRLLTLVGRDGVRWQVKLKEEKSGRLCLGRGWKEFATANGLKKGEYFTFDFVCENGIRMLRLVYTEFTSTDRRQTGESSSKAKKKEFFFHRT