Information report for 676753378
Gene Details
Functional Annotation
- Refseq: XP_024005181.1 — dentin sialophosphoprotein
- TrEMBL: R0GUH2 — R0GUH2_9BRAS; Uncharacterized protein
- STRING: Cagra.0495s0032.1.p — (Capsella grandiflora)
- GO:0015031 — Biological Process — protein transport
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00083914001, GSBRNA2T00091355001, GSBRNA2T00091349001, GSBRNA2T00076786001, GSBRNA2T00123083001, GSBRNA2T00104328001, GSBRNA2T00152581001
- Brassica oleracea: XP_013638716.1, XP_013589237.1, XP_013595910.1, XP_013620702.1
- Brassica rapa: XP_009128723.1, XP_009144545.1, XP_009144546.1
- Raphanus raphanistrum: RrC16954_p1, RrC1373_p1
Sequences
CDS Sequence:
- >676753378|Sisymbrium_irio|B3|676753378
ATGGTTCTCCCACGTTTCTTTAAAATTTTCCTCTCCCATTTCAGCTCGCAATCCATGTTGATCCCACCGTCCTATTACGATGAGCTACCACCTTTATTGCCCAAAACGGCTCTTCTCCAAGGCAGTGGTGGATGCTTCTGGACGGTGGCTATGATGAAGAGGCGAGATGAGGTGTATTTTGGACAAGGTTGGGCCAAGTTTGTCGAGGATACACGTCTTAGAGATGGAGACGTATTGACTTTCATTTATGACGGATCTCGCAATTTCAAGGTCAGCATCTATGGTAGTGGAGGATGTAAGGAGGCAAGAGTTGTTGCTCAAGTTGTAGCCATAGACGATGACAAAGATGACAGTGTTAGTCATCTGACCAGCAAAGACACAAACACTTCTTCAGAGCCTGAGATGGCGAACACTGTCCCCAACACCAACACCAGGAACAAAGGGAAAAAGAAAGTTCTGGAAGATTCTGATGAATCGTTTGCCTCAGAGGATGCCAACAGCAGTGACACTTCTCCAGAACCTGAGATGGCAAAGAGAGTCCCAAGAACCAGGAGCAAAGGGAAAGAGAAAATTGCTGTGGAAGATTCTGATGATTCGTTTGCCTCAGAGGATTCCAACAGCAGGGATAGTTCTTATTATCCTCCCACACTCTCTTACATGACCCCAAAGGTGGCAAATCCGAGAAGGAAAGGAACGTCCAGATCAGCAAATTCTGTTGTTGGGTCAACAAGTTACAGACCTCGTCCAATGGCAAGGAAGAGCGAGTCTGTAATCAAAAATCCAGAGGCGTATTTGGATGATCCGAACAACGTATTTTTTGAGACAGTCGTCAAGAGTAGGACATACGAGCTGTTGATTCATGCACAGGTAGTGAGAGACTATTGCCTAAAGTTCCAAAATTTCGTTGACTACATTGATAACCACGAAAACGGGAAGCTACAAGCGGAAACAACAAACTGGCACGATCAACGTGTGTGCATCAAAAAATGGAACCGCATATGCAAGAGGGACGGTTTCAAGAAAGGAGATCATAAGGTTCTTCATCGAAGTTTTAAGCCTGCGAAATGCAAAATCACTTTACAAATGGCGACTTCGCGCCTTAAAATACTGAAGAACAAAAAGGATACACAGATTAAGCAACTGAGGAGAGAACTGGCTCATTTGCTCGAGTCTGGACAGACTCAGACGGCTAAAATTCGGGTGGAGCATGTAGTGAGAGAAGAAAAGACAGTGGCTGCTTATGAGCTCGTTGGTATATACTGTGAACTCATTGTTGCTCGTTTGGGTGTGATTGACTCGCAGAAGACATGTCCGAATGATCTTAAGGAAGCTGTTGGGAGTGTCTTATACGCTTCCCAAAGGTTATCAGATGTCTCTGAGCTGGCTGATGTCGTTAAGCATTTCACTGCAAAGTATGGAAAAGATTTTGTTTCAGCTGCTGTTGGGTTGCAACCAGATTCTGGTGTGAGCCGCTTGTTGGTGGATAAATTGTCTGTTAAAGCTCCTGATGGTCCAACGAAGATAAGAATTATGAAAGAGATTGCTACGGAGCATAATGTAGCATGGGAAGCAGAATCTTTGGTTGAGTCTGATCCAAAGGAAACCGTATTGTTGAGTGGAGCAAGTTCCTCTCAGTCGGTGAGTGGATTAAACACGAATTCTTCAAGAATCCCAAACAATCAACCTCCAGACGTCCAAGCACCAGCTACTCTCAATCCGTCGCAGCCTTCATATGCAACTGATGGAAGGTCTTCAAGCCGCACTGCATCGACCGACTTCAACACTGGCAAAACAGCTGATTACTATCATCAAGATCCGAGACCTTCTGGAGATAGAACTGATGGCGGAGAATACAGACCTCCAAATCCAAGTTATGCGGATCCATCTCCATGGGAAACAGAATTTGTTGATGCTACGACTGCTGCACGTGCAGCTGCTGAATCTGCTGAAAGAGCGAGTTTTGCTGCACGTGCAGCTGCTGAGCTTTCAAGTAAAGAAAGGTTGAGGACGGCGATGCAGAGTTCTACAGAGTCGCGGAACTCATCCTCGCATGATAATATAAGAACTGAGCCATCACATAAACATAATAGTAACTCAAATGTGCAAAGCGGAGGTTTTGCTAAAGAAGAAACGTTAAGAAGCAGTCACAGGCACGAAGATCAATCTACTACTAGGGCAGAGCTTTCTGAGAAGAATGCTGTTGAGCAATTAGAAAATGCTTCATGGGGGAGAGGTCATTCTCGAGATAACTCATTGGAGATGAAGCCGAATGATTCCTTTGCTAAAATAGCCAGAGAGAAGAAGCAGCCAAGCGTGGATAATATCAACGTCAGTTGTTCAGATGATGTTCAACTCAGGAAACAGTCAAGTCGGGTTTCATCGGATTCAGACACAAGCTATTTTTCTGAGGACAATAACGTCACTTCCTCCGACCGTAACGATGTACCTAGCATCTTTGAGGATAACCGATTTCAGGGCACTGTTAAAGATACAGAGAACCTGCACGGTCATGATGTTGCTCCAGCTTTTGATGACCATAGCTCGTTTTTCGATAAACCTCAATTCGACACAGAAGATGCTTATGGCGATGAGCCAGAACATGGATTAGGATTTTCATTGCTTGGAAGCAGCAGCAAAACACCTGATCACATGCCGTCAGAGATAAACTCATGGAGTTTCAAAGGGCACAAGTCTCCGGGACAACCCAGCTCGGCCTCGACTTCACAGGTTCATGAAAGGGAGAAGCCCAGCTCTCCATTGTTTGATGATGGTCCTACAAGTCCTCCAGCTTCTGTGCATGAGCCTGAGCCGTCTGCAAAGTTTGACGATTATGACCGAGATTCTGAAAGTGAAGAAGACGATGTTAGAGCAAAAGGAATACTTTCTGGACGTGTAGAGGAAAAGCCAAAGCTGACATCTCACAAGTCCTCAATGTCTGAAGTTCCTGATGATTTAGGACGCTACTTTTTCCCCTCAGACACAGAAGCCCAAGAAGATGATTCCAGACCACATGAGGAAAATTCCGACGCAGAAACTCCTACAGGTCCGAGACTTGGACCTCTAACCGATGGACTCAATAATGAAAAGACTCTCCCACCTTGTGAAATGAGTTCGCAGAGAGACAAGACATTGTCCAAATCTGTAAAAGAGCATGTCCAAACAGAGGTTGATCTGTCGAGGTCTTCTTCTTCGCAAACTGTTTCTCCTAGCAGTATCAGAAAAGATCTTTACACTCAGAAAGCAAACGATCCCAAAAAAAGACCAAGCTATATACCTCCATATTCATCTTCTAGTGATGATGAAACAGAGGTGGAACTTCTGAAGAGAGTTTCTATCAGAAACCAAGATAAAATAACTGAGTCAAGACCCCGGCCGACACATCCTCATTCGCGTGTCACCAATGAAGACTCGAAGGAAGGTATCCCGACTCGAGCTTCTATTAGAAGTCAAGAGAAGAGGACCTACAAGACCACCCCTGCTGTTACCTCATATTTCCACTCATTTTCCAGTGACGATGAAGATGATGAGAAAGACTTTCGTAGAGATGTTTCAGGCGTTCAAACCAAGCCTTCTATATCCATCTCACGAAGAACAAAGGGGCAAGAGAGAAAACCATCCCTGGTTACTACAAAGACGGACAAAGTCTCTCAGGATCAGGAATCGCGTCCGAAGTTAATAGATGAGACCAAGCCATTGGCTAAGAAACAAGAGTCAGTTTCTTCGAGCTCTCTACCAAAAACTGTAAAAGTGTCTCACGATCAAGAATCTCCTCCAAAGCTAGGTCACAGGGCCAAACCACTGGCTGATCAAGAAAGGCCAGCTTCATCTTCAAGTTCTCTTCCAAAACCTGTGACATCACCAGAACCGGAAACTCAGTCGAAGCAGAAAGCTAGCCATGTTCATCCCAAGCTCCCAGATTACGACGACATATTTGCCAAGCTCGGGGCTCTGCGACGGTAA
Protein Sequence:
- >676753378|Sisymbrium_irio|B3|676753378
MVLPRFFKIFLSHFSSQSMLIPPSYYDELPPLLPKTALLQGSGGCFWTVAMMKRRDEVYFGQGWAKFVEDTRLRDGDVLTFIYDGSRNFKVSIYGSGGCKEARVVAQVVAIDDDKDDSVSHLTSKDTNTSSEPEMANTVPNTNTRNKGKKKVLEDSDESFASEDANSSDTSPEPEMAKRVPRTRSKGKEKIAVEDSDDSFASEDSNSRDSSYYPPTLSYMTPKVANPRRKGTSRSANSVVGSTSYRPRPMARKSESVIKNPEAYLDDPNNVFFETVVKSRTYELLIHAQVVRDYCLKFQNFVDYIDNHENGKLQAETTNWHDQRVCIKKWNRICKRDGFKKGDHKVLHRSFKPAKCKITLQMATSRLKILKNKKDTQIKQLRRELAHLLESGQTQTAKIRVEHVVREEKTVAAYELVGIYCELIVARLGVIDSQKTCPNDLKEAVGSVLYASQRLSDVSELADVVKHFTAKYGKDFVSAAVGLQPDSGVSRLLVDKLSVKAPDGPTKIRIMKEIATEHNVAWEAESLVESDPKETVLLSGASSSQSVSGLNTNSSRIPNNQPPDVQAPATLNPSQPSYATDGRSSSRTASTDFNTGKTADYYHQDPRPSGDRTDGGEYRPPNPSYADPSPWETEFVDATTAARAAAESAERASFAARAAAELSSKERLRTAMQSSTESRNSSSHDNIRTEPSHKHNSNSNVQSGGFAKEETLRSSHRHEDQSTTRAELSEKNAVEQLENASWGRGHSRDNSLEMKPNDSFAKIAREKKQPSVDNINVSCSDDVQLRKQSSRVSSDSDTSYFSEDNNVTSSDRNDVPSIFEDNRFQGTVKDTENLHGHDVAPAFDDHSSFFDKPQFDTEDAYGDEPEHGLGFSLLGSSSKTPDHMPSEINSWSFKGHKSPGQPSSASTSQVHEREKPSSPLFDDGPTSPPASVHEPEPSAKFDDYDRDSESEEDDVRAKGILSGRVEEKPKLTSHKSSMSEVPDDLGRYFFPSDTEAQEDDSRPHEENSDAETPTGPRLGPLTDGLNNEKTLPPCEMSSQRDKTLSKSVKEHVQTEVDLSRSSSSQTVSPSSIRKDLYTQKANDPKKRPSYIPPYSSSSDDETEVELLKRVSIRNQDKITESRPRPTHPHSRVTNEDSKEGIPTRASIRSQEKRTYKTTPAVTSYFHSFSSDDEDDEKDFRRDVSGVQTKPSISISRRTKGQERKPSLVTTKTDKVSQDQESRPKLIDETKPLAKKQESVSSSSLPKTVKVSHDQESPPKLGHRAKPLADQERPASSSSSLPKPVTSPEPETQSKQKASHVHPKLPDYDDIFAKLGALRR