Information report for 48248
Gene Details
Functional Annotation
- Refseq: XP_003061444.1 — predicted protein
- TrEMBL: C1N0S8 — C1N0S8_MICPC; Predicted protein
- STRING: XP_003061444.1 — (Micromonas pusilla)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Fragaria vesca: mrna09082.1-v1.0-hybrid
- Glycine max: Glyma.04G037800.1.p
- Lactuca sativa: Lsa003643
- Lotus japonicus: Lj1g3v2584580.1, Lj1g3v1649030.1, Lj1g3v2584600.1, Lj1g3v1649020.1
- Prunus mume: XP_008220212.1, XP_008220213.1
- Prunus persica: Prupe.1G438000.1.p, Prupe.1G437900.1.p
- Pyrus bretschneideri: Pbr008717.1, Pbr019600.1, Pbr019622.1
Sequences
CDS Sequence:
- >48248|Micromonas_pusilla_CCMP1545|B3|48248
ATGGCCTCCAACGCGGACATCACCGCGTTCGAGATGGAGCGCAACCGTCGCGTGCAGGATAACATGCGACGCATGCAGGAGCTCGGGATATTCAAGCTCGCGGTCGCCGCGGCTCCCCCGCCGAAACCGATCCGCGCGCCCGCGTCCGCGCGAGACCGCGCGTCGCGTCGCGAGTCGCTCGGCGAGCGAAGGCAGTCGCTGCGCATCGCCTCCCTCCCCACGCCGACGTACGAGGAGGTCCGCGCGGAGGTGGCGAAGCACTCCGAGAAACAACGCCTTTCCAGCGGCGGTCGACGCACGCACAACACGAGCGACTGGAGTTGGGAGGACGACGACGGCAGCAACGACTCGTTCGCCAACGCGGCGGCGTTCGCGCGCGACCCCACGGCGGCGTCTAGCGTCCAGCGCGCCCCGCAGTGGTCCCCGCCGGGCCCCGCGTTCGTGAAGCTCATGCTCCCGTCGCACGTCTCCGGCGGGTACTGGCTCCAGGCGCCGTACGGCATCGGCGACTTCCTCCCGGACACGACGAGCACGGTGGTGTTGACGTGCGACGGCGAGGAATGGAAGACGGTATGGCTGGTTCGATCCGCCAACAACGGCGGCTTGAGCGGCGGGTGGCGCGGGTTCGCCGTCGATCAGCGGCTCGCCGTCGGCGACGCGTGCGTCTTCACGAAAGAGCGCGGGATGCGGCTGAGGGTGACGATTCACCGCGCGCATCTGTGCGGCGGCGACGACGCCGCCGCGGAGAAGGCGTTCGAAGAGGCGGAGAGGCACGCGGAGGAGATGATGCGCGCCCCTGGAGGAGGATGCCGCGTCGCAGGCGACGAGAAAAGCGCCCCCGACGCGGTGGCCGCGACGACCGAGGATATCCCGCACGGGTTCGGCACCAGCCGCGCGCTGCACGTGTACTCGCGCCGCCGTCTCGGGAGGTACGACGCGTCCGCGGCCGCGGCGGCGAGGAAGCGAACGGGCGCGAACCCGAACGAGTGTCTGCGCATCGCGAAGGACGCGGCGCCGTCGCTGGCGTCGCTCGTGGAACGCGCCATCGAGGAGCGAAAAGCGGCGGCGCGGGAGAGGGAGGACGCGCGCGACGCGTCGCCGCGCGTCCCTCTCATACCGCGCGTCGCCCCCCCTCCAGGTCAAGATGCGGACGCGAAGAGTACGGGCGGCGTCGTCGACGCGTCAGAAGACGCCTCGCCGATCGCGGACGGGTCCGTCGGCGAGGCGGCGGAGGCGGCGAACAAATCGCCGCCAGCGCCCGGGCAGCTCCCGTTCGCGTCCCCGAAGACGCAGACGAGAACGCCGCGCGACTCTACCAAGCGCGGGCGTCGCGGCAAGCGCCCGGCGACGCCCGCCGGGAAGATGCCCGCGCCGCCGGGGAGCGCGCAGGCGACGCCGACGACGCCGCCGCCGCCGTCGACGACGACGAAACGCGCGAAAGCCGCCGCCGCCGCCGTCGCGCCGCTGCGTCAGGGCGAGGTCGCGGCGCCTCTGGACGCGACGCCCGCGTGCGGCGGCGGCGACGTCGACATCGACGACGACGCGGACGCGGACGCGCGCGCGCGCGCGAACGCCGCCGCGAACGCGAACGCCACCGCGACCGGTCGCGCTCACCCGGGGTCGCGACAGAGGAGGACGAGCGCGTCGGCGATGCATCACGGGTGGGCGACGCCCGCGGAGATGCGCGCGGAGTACGAGCGCGCGACGGGCGCGACGGCCGGCGCGACGACAGCCGCTCTCGCGACGGCGCGACGGGCGATGACCGCCGCCGCGTCCGCGGAGGACGCGACCCCCGCGGACGCGGCGGCGGTGAAGCGCGCGGACGCGGACGCGCCGCCGCCGGCGCCGAGGGCCGCGCGGGGAAGGCCGCCGAAGGCGACGGCGACGGCGGCGAAGAAGAAGCGCGCGCGCGCCGCGTCGAAAGAAACCCTCCCCGACCGCGCGGACGGGACGCCGCTGTCGCAGGTGTTCCGAAGCACTAAGCGAGGACGAACGAATTCGTGCGCGAACGCGAACGCGAACGCGAACGCGACGTCGTCCGCGGCGGCGGCGTTCGTGTCCCCGGCGGCGGTGAAAGCGGGAACGAAGTCGCCGCCGAAGCGGGGGATGAAAATCACGGAATCCAACGTCGGCGCGCCCGGGTCGTACCTGGGCCGGCGGGTGTCGTGCTTCTGGCGCGCGGAGGCGCGGTGGTTCGAGGGGACGCTCGTGCGGTGGCGCGTCGGGGACGGGTACAGGGTCGCGTACGACGACGGGGACGTCGAGGACGGCGTGGATTTCCCGGAGGATGGCGAGACCGTTCGCGTGCTGCCCGCTCGCGCTCGAGCGCACGCGTGA ATGGAAATTCCAAGTCAAGAAGAGGAAATGCCAATGCCAATTAACAGTACATATGTTGGAGGAGGAGGAGGACATGGTCATGGCCACATAATACATCATGATCCTACACCAGTACCCAACAATACTAATCACATTATACCTTCTTCTGTTGCAAATTCCATCAATGGCCCTCCCATTGAAGCAACACCAGTATCAGCAGATCATCATGTGCCTTACAAGAAGATTGTCAGGTACAAAGAATGCCTCAAGAACCATGCAGCAGCAATGGGTGGAAATGCAACTGATGGATGTGGTGAGTTTATGCCAAGTGGTGAAGAAGGTACAATAGAAGCACTCATTTGTTCAGCTTGCAATTGTCATAGAAATTTCCACAGAAAAGAAATAGAAGGTGAGCAGCAACTTCTTCAACTACAACCACCACCTTCCTCTTGTGATTACTATAATCTCAACAGGGGAGGGAAAAAAGTTTATTTAGGACACTCACACAACCATCACAAAAGCCTTTTGGGACCTGAACAATATGGAACTATAATCCCTTCTAGAGCAACAGCACCACATCATCATCAGATGATAATGTCATATAATAATATGGGGTCACTTCCTTCTGAGTCAGAAGAGCATGAAGATATTAATGGTGGTGGTGGGGTTATGGCTATGGCTATGGCTAGGCCATTACATCATCATAATCAAATGGTGAAGAAAAGGTTTAGAACAAAGTTTACTCAAGAACAGAAGGAGAAAATGTTCAATTTTGCTGAGAAAGTTGGATGGAAAATACAAAAACAAGAGGAAACTGTGGTGCAACAATTCTGTCAAGAACTTGGAATTAAAAGAAGAGTACTTAAAGTTTGGATGCACAACAATAAGCACAATCTTGCCAAGAAAAACTCCAACGTTACCATTCCTCAAAATCAAGTTTAA ATGGAAATTCCAAGTCAAGAAGAGGAAATGCCAATGCCAATTAACAGTACATATGTTGGAGGAGGAGGAGGACATGGTCATGGCCACATAATACATCATGATCCTACACCAGTACCCAACAATACTAATCACATTATACCTTCTTCTGTTGCAAATTCCATCAATGGCCCTCCCATTGAAGCAACACCAGTATCAGCAGATCATCATGTGCCTTACAAGAAGATTGTCAGGTACAAAGAATGCCTCAAGAACCATGCAGCAGCAATGGGTGGAAATGCAACTGATGGATGTGGTGAGTTTATGCCAAGTGGTGAAGAAGGTACAATAGAAGCACTCATTTGTTCAGCTTGCAATTGTCATAGAAATTTCCACAGAAAAGAAATAGAAGGTGAGCAGCAACTTCTTCAACTACAACCACCACCTTCCTCTTGTGATTACTATAATCTCAACAGGGGAGGGAAAAAAGTTTATTTAGGACACTCACACAACCATCACAAAAGCCTTTTGGGACCTGAACAATATGGAACTATAATCCCTTCTAGAGCAACAGCACCACATCATCATCAGATGATAATGTCATATAATAATATGGGGTCACTTCCTTCTGAGTCAGAAGAGCATGAAGATATTAATGGTGGTGGTGGGGTTATGGCTATGGCTATGGCTAGGCCATTACATCATCATAATCAAATGGTGAAGAAAAGGTTTAGAACAAAGTTTACTCAAGAACAGAAGGAGAAAATGTTCAATTTTGCTGAGAAAGTTGGATGGAAAATACAAAAACAAGAGGAAACTGTGGTGCAACAATTCTGTCAAGAACTTGGAATTAAAAGAAGAGTACTTAAAGTTTGGATGCACAACAATAAGCACAATCTTGCCAAGAAAAACTCCAACGTTACCATTCCTCAAAATCAAGTTTAA
Protein Sequence:
- >48248|Micromonas_pusilla_CCMP1545|B3|48248
MASNADITAFEMERNRRVQDNMRRMQELGIFKLAVAAAPPPKPIRAPASARDRASRRESLGERRQSLRIASLPTPTYEEVRAEVAKHSEKQRLSSGGRRTHNTSDWSWEDDDGSNDSFANAAAFARDPTAASSVQRAPQWSPPGPAFVKLMLPSHVSGGYWLQAPYGIGDFLPDTTSTVVLTCDGEEWKTVWLVRSANNGGLSGGWRGFAVDQRLAVGDACVFTKERGMRLRVTIHRAHLCGGDDAAAEKAFEEAERHAEEMMRAPGGGCRVAGDEKSAPDAVAATTEDIPHGFGTSRALHVYSRRRLGRYDASAAAAARKRTGANPNECLRIAKDAAPSLASLVERAIEERKAAAREREDARDASPRVPLIPRVAPPPGQDADAKSTGGVVDASEDASPIADGSVGEAAEAANKSPPAPGQLPFASPKTQTRTPRDSTKRGRRGKRPATPAGKMPAPPGSAQATPTTPPPPSTTTKRAKAAAAAVAPLRQGEVAAPLDATPACGGGDVDIDDDADADARARANAAANANATATGRAHPGSRQRRTSASAMHHGWATPAEMRAEYERATGATAGATTAALATARRAMTAAASAEDATPADAAAVKRADADAPPPAPRAARGRPPKATATAAKKKRARAASKETLPDRADGTPLSQVFRSTKRGRTNSCANANANANATSSAAAAFVSPAAVKAGTKSPPKRGMKITESNVGAPGSYLGRRVSCFWRAEARWFEGTLVRWRVGDGYRVAYDDGDVEDGVDFPEDGETVRVLPARARAHA*