Information report for 462946035
Gene Details
Functional Annotation
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.3KG487900.1.p, Pavir.3KG487800.2.p, Pavir.3KG487800.4.p, Pavir.3KG487800.3.p, Pavir.3KG487800.1.p, Pavir.3NG309000.1.p
- Setaria viridis: Sevir.3G389300.1.p
Sequences
CDS Sequence:
- >462946035|Eragrostis_tef|B3|462946035
ATGAAGATGGAGTGGCTGAAAAAAGAAAGGTCGTTCTATTTCAAGGAAATACCAAAAAAGGTTGCAACCAATGTCAGAGGGCATATCGTTGAAGAAGTCAAACTAGAAGTGCCAAATGGTAAAACACATAATGTTAAGATTGCCAAGAAACAAAATGACCTGGTCTTTGGATCTGGATGGTCAACTTTTGCAAGTGCTTATGATCTTGAACCTGGAGATTTCTTGACGTTTGCTTATGATGATCACTCTCACTTCAAAGTTCAAATCTTTGAGGCGAGTTGTTGTAAGAAAGAGTTCTCCTGTGTTCTGACCGACTACACTCCTTGCGTTCAACAAAGGTGTTTTTCTCAGGGTAATCATATCCATTCAGTTACGACGGAAAGGCTGGCCAAACATTGCAGTGGTAGCTCTAGCCAGAGTAAGAAGACTTCAGAAATGAGTCCAACAGACTCAACTTCTCAAAACCCAAATGAAGACGTCTCATCTTCTGAACGCAGTCAGGAACCCATGGATTTCAGGTGGCTTCAGGAACCCATGAATTTCAGGTGGCTTCCAGAAATCAACCAAGTGTTGCTTTGTTACAATATGACAAATGAGCAAAACGACCAAGTTGATGCCCTTGTGCATAAGATTCGACCTCAAATTCCACTATATGTCACAGCCATGGACAAAACAAATGTGGCTAGTGGATTTCTGGCCATGGACAAGGATTATGCTCTCAAATACCTTTCAGAAGAAAATGGTACCATCACACTTTCTCTACCTGATGGTAGCGAGACATGGGCCAGCAATCTGGACATCAACACTGATGGTCGATACGCTCTTTCTACTGGCTGGTTGCACGAAGGTGATGTCTGCGTATTTCAACCTTCAAAGGGTGATAATAACACGGCTTTGATATTTCATCCCCTTGAAGGAAGCTGCAGGACAGAGGGACCAGGATATGCCCTTTCCACCAAGAGTCCTAGGCATGGAGCTGCTAATACTCCATACATGACACCACGATTCACCATTCTAAATGACCAGCAGGAGAGGAAAGTAATCAAGAAAGTTCAAAAAATCAACTCAGAGATTCCCATTTATGTGGCCGTCATCCAGAATAGCAATATAAATTCATGCATTCTGCAATTTGGCTCGGAATATGCAAGAATGTATCTCCCACGTAAGGATGTGACTATGAGGCTTCGGCGTCCCGGCAAGGATTATACGTGGAAAGCTGAACTCCATATCAGGAACAGGAGGCATAGAGTTGGTCAAGGCTGGAGGCAATTTACGGATGAAAATAAACTGAAACTAGGTGACATCTGCATGTTTCAGCTGATGAAAAACAGGAAGAAGCTTACCATGTCCGTCCACATTATTCGAAAAGAGCGCTGCCAGATCTTACATGCTTTTGGCCTGATGGCTTCTCAAGATCACGAGTACGATGGAGGGAGCGGCCACAAGATCAGCAGCGGCAGCTGTTGCCGGAGGTGCAGCCACTGCGGCGAGCATTACTACTGGGATCACCTGGGCAATCGGCAGAAGCATTTCTTCAAGGTCATGGTTGGCGATTTTCAACAAGAAATGACCGTGCCGGAGAAATTTTCCAACAATTTCAGAGGTCGGATCAGTGAACTCGTCAAGCTGGAAGCCTCAGATGGAAATATGTACCATGTTCACGTTTCCAAGGATCAGAACAAGCTGGTTTTCAGATCCGGATGGGGTACGTTCTCCAGCGCTTATGAACTGAAGCAGGGCGACTTACTGGTGTTCAGATACACTGGAGATTCCCACTTTAAAGTCCTGATCTTTGATCCAAGTGGGTGTGAGAAAGTATTTTTCCACGTCGTCTTGAACTCCTGTCGCTTTGTTGATCAACGTGGCATTCATCATGAAAAGTTACCGTCCCAGGAAGGATTTGTGCAGAATCAAAATGGTGGATCGAGCCACAGTAGGAAAGCTTCAAAGATGTCTCCATCAGACTCACCTTCACAGAGATCCAGTTTTGCAGTAGCAGAAGATATCCCATCTCCAGAGGACATTCAAGAACCCTCAAATTCAGGTGATCATCAGACGTCCACCGAGTCACGCTTCATCTTAGCAGAGGGGTGCAACCTTACTAGAGGGCAGAGGGACAGTATCGACACACTTGAGAAGAAAATTAGGCCTGAAACTCCACTCTATGTTACACATTTGAACAAGACACGTATGTCTGATACATTTCTGACAAACACCTTCCAAATGAAGACCAAACCATCACGCTCTGTCACCCTCCGGACTACAAGGAACGGGATGCAAATTTCAAGGTTTCCGCCGCTGTTCATCCTTGACAACAAGGTCCAGGAAGGTGACGCCTTCGCATTCGAAGCATCCAAGATAGAGAGAAGACTATCGGTGACCGTTCATCCTCTTCAAGGAAGCTACCAAGAGTTAGGCACTTCGTCACCGATCAACCGAGTAGTTGTTCCAGCACAGTATATGGTAACAAAGCAAACGAAACTAACGCCGGAGCAGAAGAAGAAGGTGGAAGAGAAGCTCCAGGAAATCCAGCCTGCAACCCCCGTGTTCTTGTCGATCAAGGTGGAAGAGAAGCTCCAAGAAATCCAGCCTGCAACCCCCGTGTTCTTGTCGATCAAGAGACGCTGCGACATCAGAATGGAGTTGTCAGGCTTCAGCCGGACCTTCGCCGACGAGTACCTGCCCCGGACGCCGAGGACGATTCGGCTGCGGCGGCCGGAGCTGAACTGCAGCTGGGAGGTGGAGCTGATGATCCACGAGGTGCACCGGCTGTGCCGCGGCTGGAAGCAGTTCGTCGACGACAACGCGCTGCGGCAGGGCGACGGCGGGGAGGAGGGGGTGGTCGCCATGAACGTCCACGTCATTCGCGGAGAC
Protein Sequence:
- >462946035|Eragrostis_tef|B3|462946035
MKMEWLKKERSFYFKEIPKKVATNVRGHIVEEVKLEVPNGKTHNVKIAKKQNDLVFGSGWSTFASAYDLEPGDFLTFAYDDHSHFKVQIFEASCCKKEFSCVLTDYTPCVQQRCFSQGNHIHSVTTERLAKHCSGSSSQSKKTSEMSPTDSTSQNPNEDVSSSERSQEPMDFRWLQEPMNFRWLPEINQVLLCYNMTNEQNDQVDALVHKIRPQIPLYVTAMDKTNVASGFLAMDKDYALKYLSEENGTITLSLPDGSETWASNLDINTDGRYALSTGWLHEGDVCVFQPSKGDNNTALIFHPLEGSCRTEGPGYALSTKSPRHGAANTPYMTPRFTILNDQQERKVIKKVQKINSEIPIYVAVIQNSNINSCILQFGSEYARMYLPRKDVTMRLRRPGKDYTWKAELHIRNRRHRVGQGWRQFTDENKLKLGDICMFQLMKNRKKLTMSVHIIRKERCQILHAFGLMASQDHEYDGGSGHKISSGSCCRRCSHCGEHYYWDHLGNRQKHFFKVMVGDFQQEMTVPEKFSNNFRGRISELVKLEASDGNMYHVHVSKDQNKLVFRSGWGTFSSAYELKQGDLLVFRYTGDSHFKVLIFDPSGCEKVFFHVVLNSCRFVDQRGIHHEKLPSQEGFVQNQNGGSSHSRKASKMSPSDSPSQRSSFAVAEDIPSPEDIQEPSNSGDHQTSTESRFILAEGCNLTRGQRDSIDTLEKKIRPETPLYVTHLNKTRMSDTFLTNTFQMKTKPSRSVTLRTTRNGMQISRFPPLFILDNKVQEGDAFAFEASKIERRLSVTVHPLQGSYQELGTSSPINRVVVPAQYMVTKQTKLTPEQKKKVEEKLQEIQPATPVFLSIKVEEKLQEIQPATPVFLSIKRRCDIRMELSGFSRTFADEYLPRTPRTIRLRRPELNCSWEVELMIHEVHRLCRGWKQFVDDNALRQGDGGEEGVVAMNVHVIRGD