Information report for 462939340
Gene Details
Functional Annotation
- Refseq: XP_004972298.1 — B3 domain-containing protein Os01g0905400 isoform X1
- Swissprot: Q5N6V0 — Y1054_ORYSJ; B3 domain-containing protein Os01g0905400
- TrEMBL: A0A3L6RFD7 — A0A3L6RFD7_PANMI; B3 domain-containing protein
- STRING: Si004140m — (Setaria italica)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.5KG733400.1.p, Pavir.3KG478200.1.p, Pavir.5KG703900.2.p, Pavir.3KG478200.2.p, Pavir.5KG703900.1.p, Pavir.3KG478200.3.p, Pavir.3KG478200.4.p, Pavir.5KG733400.2.p
- Setaria italica: Seita.5G419700.1.p, Seita.5G419700.2.p
- Setaria viridis: Sevir.5G425100.1.p, Sevir.5G425100.4.p, Sevir.5G425100.3.p, Sevir.5G425100.2.p
- Zea mays: GRMZM2G177244_P01
Sequences
CDS Sequence:
- >462939340|Eragrostis_tef|B3|462939340
ATGGTGGAGGTGATAATAGCCTTGAAAAAGGAGCAAGAAGAAGAGGGCGTGGTCGGCATCGACAGTGGTGACGAGGGAGCCGGGAAGGTGGTGAAGAGGAGGAGGAAGAAGAAGGAATGTGATCCACACAAGAAGCGCGCATGCGTGGATTGCACAAAGAGGTGCGCCCGGATCCATGGCCGGGTTTCTTCGTCCTCTCGGCCGACCCCGGAAGTGCTGTCCTTCTTCAAGGTCATGATGGGCTGCTTCTCCGAGGACATGGATATACCGCCCCCATTTGCCAAGACAATCTTAGACCTAGCAGGCTCCAACATTTATCTTGAAGATTCGTTCGGGCTCCGTTGGCGCGTTCGTTTGTGCTTGCGAGACGGTGTTTTGTCATTTGGGCATGGATGGAAGAACTTTGTGCTAGACCATGCCGTCAGCTGTGGCGAGTTCCTGGTGTTCAGGCAGATTGCCAGGTCCGTTTTCACTGTGCAAATGTTTGCCCCGTCAGCTGTTGAAAGGCTGTATCTCTGTGAGAGGAACAAAAGGCAGAGCAGGAAGAGGAAGCCCAGGCAGAAAACAAGCTCACCCGCCACTGAAACGGTGAAGATAAGCAATAATGGGGAAAGCTGTAAAAAGAAACATCGTACTGATCAGGTCCCAAGCGACTGTAGAATGTCAGTTCATGTTTGCATTGACGACTCTGATGTTCCCAATTCTGCAACCGAACCAAAATGTTCAGAAACTTCAGAGAAAGCACTGGAGGCAGGACCTTTAGAATCACAAGAAGTTTCTAATGCGTTTACAAGGCATCAGGGCAATGCTCAGAGGGTGTTAGATGGACAGATTGAAATAGCAGACAACTGTACAGTCTTTACAGAGCATCCCATCTTTGATGCTACTGAAATTGACCATGTCCAGGGCTCTAGCTTGCCACCGAATGTTGATGCTAGTGGACCTATGGCGATGATGGATCTCAATGAAGTAATTATTGATGATATATATTTGTCAGCTGATATATATGAATTCGAGAGCGGTATTTGTGATACTGAGGCATTTTCTGTTGACCAGAATAAGGAAAGGCAGATTTCTGATGGCCAGACTTCAGGTTTGAATTGCCTTGAACATGACTTGCCAAATCACCATTCTTCCATGGGAATTGGCCAGGGATTTTTTATGTCAGAAACATTACCATGCATCGAAAATAAGCAGATGGTTGACGTACTGGAAACATGTGAAGGTGCTGGCAATGTTCCAGCACATGACATAGACATCAACTTGCTCCCCTCTAAGGAGCCATCCTTATTTGGAGAGGACAGGTCTTCACCTCCAACTGATGCTGAAGTCCCATTTCGTGAATGTACATCAGACAGTTGTAATATGGATAAATGTTCTTGCAATTCCAACCAAGCAGCACAAAAAGAAGGAATCGTCGCAGCAGATTCTGCTGTAATCCATGATAAACCGCATGATGGTCAGGTCTACATGCAAGACAATAAAGGGAAGCATGCTGCTGAAATCATGTCAAGTAGTCCAAGGCCTCAGGAACTTGCTCGTCCCGGGAAAGATCCCCTGGAAACTGGAAACAACTCTGGAGACCTCGAAAGTGGAAGCATTGAATCAGGGGGTGTTCTTGCACTTGAAGCAGACGGCAGAAAGTTTTGTGTTGCTGTGCCTGCACTAAGTCAAACATGGCTTGAGCTTCCCAGTCGACTACCGGTTCTTCCAAGAACAAAGAAGCAGGGAAGGAAGGTTGTAATTCTCAAGGATCCATGCATGAGACTCTGGCCTGTGATGTACCAATGCGCCCCAAGGTTCAGTGGGTTCATCACTGGCTGGGTGGACCTCAGCAGGGAGAACAGCCTGCAGGAAGGCGACATCTGTGAGTTCGAATTCAGCGGTAACCGTGAATTGTCATTCCAATTCACTGTTACAACATCCATCAAGGGAAAAGAAATATTGGCGCTAATGAAGACGTCTGTGCAGAACACTAGGATCTTCTGCCATCCCTGGCTTCACCTTCGAACAATTCTGACAGCGACTCTGCCAGATCGTCAGCCGAGTATGTGA
Protein Sequence:
- >462939340|Eragrostis_tef|B3|462939340
MVEVIIALKKEQEEEGVVGIDSGDEGAGKVVKRRRKKKECDPHKKRACVDCTKRCARIHGRVSSSSRPTPEVLSFFKVMMGCFSEDMDIPPPFAKTILDLAGSNIYLEDSFGLRWRVRLCLRDGVLSFGHGWKNFVLDHAVSCGEFLVFRQIARSVFTVQMFAPSAVERLYLCERNKRQSRKRKPRQKTSSPATETVKISNNGESCKKKHRTDQVPSDCRMSVHVCIDDSDVPNSATEPKCSETSEKALEAGPLESQEVSNAFTRHQGNAQRVLDGQIEIADNCTVFTEHPIFDATEIDHVQGSSLPPNVDASGPMAMMDLNEVIIDDIYLSADIYEFESGICDTEAFSVDQNKERQISDGQTSGLNCLEHDLPNHHSSMGIGQGFFMSETLPCIENKQMVDVLETCEGAGNVPAHDIDINLLPSKEPSLFGEDRSSPPTDAEVPFRECTSDSCNMDKCSCNSNQAAQKEGIVAADSAVIHDKPHDGQVYMQDNKGKHAAEIMSSSPRPQELARPGKDPLETGNNSGDLESGSIESGGVLALEADGRKFCVAVPALSQTWLELPSRLPVLPRTKKQGRKVVILKDPCMRLWPVMYQCAPRFSGFITGWVDLSRENSLQEGDICEFEFSGNRELSFQFTVTTSIKGKEILALMKTSVQNTRIFCHPWLHLRTILTATLPDRQPSM