Information report for 462927948
Gene Details
Functional Annotation
- Refseq: XP_025818273.1 — B3 domain-containing protein Os01g0234100-like isoform X1
- Swissprot: Q0JP99 — Y1341_ORYSJ; B3 domain-containing protein Os01g0234100
- TrEMBL: A0A0A9PFY5 — A0A0A9PFY5_ARUDO; Uncharacterized protein
- TrEMBL: A0A368QZQ9 — A0A368QZQ9_SETIT; Uncharacterized protein
- STRING: Pavir.Eb00031.1.p — (Panicum virgatum)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi2g07980.2.p, Bradi2g07980.1.p
- Panicum virgatum: Pavir.5NG005800.1.p, Pavir.5KG004600.2.p, Pavir.5KG004600.1.p, Pavir.5NG005800.2.p
- Setaria italica: Seita.5G005600.1.p
- Setaria viridis: Sevir.5G005700.1.p, Sevir.5G005700.2.p
- Triticum aestivum: Traes_2AS_FC3F1F39A.1, Traes_2BS_E29F278C4.1
Sequences
CDS Sequence:
- >462927948|Eragrostis_tef|B3|462927948
ATGGAGGCGCTCATGTTCGAAGCTTTGGTGCGGGAGTTTCGGCCAAGCTACATCTTCATGCACGGGGAGCTTCTGCGGCGGCGATGGAGCTCTCTCCGTTGTTGGCGTCAAGTTTCTGAAGAGGACCTCGATAGGAAGAGAGGAAGGCCAGCTGGCTCCAAGTCCGCCAAGAGCAAGATGGAGCGGAAGATGGACTTGGTAAAGGAGAGGCTCGCCATGCTTGACAGCACTGACAGCAGCAGCAGCAGCAGCAGCAGCGAGAATGACAACGATGAAGATTTTGTGCCCATGGATGATGAACTCGCTATTGTTGTTGATCACCAGCCTATAGATATCCATTATGATGATACAAACGATGAAAAGAAGGTTATTCCTAAGAAAGTATGTGATGTTAGAGGCCGAAACATAAGTGCAAGTTTTCGCGGCGACTGTGGATCTGCTATGGCTAGAGCTAAGGAGTTACAATCAAAATTACCACAACAACATCCTAGCTTTGTCAAGGAAATGTTGAAATCTCATGTCGTCCAAGGTTTTTGGCTGGGTCTACCAGCTAAATTTTGCAACAAGCATCTCCCAATGTATGACACTGTAATTGTGCTAGAAGATGAGAATGGAGACAACCATGATACAAATTATCTCGGTGCCAAGCAGGGACTGAGTGGTGGGAGGAGGGGTTTTGCAATGAAGCATGGACAGCGCAGCGGCGGAGAAAATCAGAAGTCCCCCAAGGCGTTTGAGCTCCAGGATTCCAGTAGTGCAGGGGCAATGGCGATCGATCAATCCCTAAAAGCAAGTTCCTTTCTTCCACTCCCTCCCCTTCTCCAGAGGAAGAGAGGAAGGCCAGCTGGCTCCAAGTCCGCCAAGAGCAAGATGGAGCGGAAGATGGACTTGGTAAAGGAGAGGCTCGCCATGCTTGACAGCACTGACAGCAGCAGCAGCAGCAGCAGCAGCGAGAATGACAACGATGAAGATTTTGTGCCCATGGATGATGAACTCGCTATTGTTGTTGATCACCAGCCTATAGATATCCATTATGATGATACAGGCGATGAAAAGAAGGTTATTCCTAAGAAAGTATGTGATGTTAGAGGCCGAAACATAAGTGCAAGTTTTCGCGGCGACTGTGGATCTGCTATGGCTAGAGCTAAGGAGTTACAATCAAAATTACCACAACAACATCCTAGCTTTGTCAAGGAAATGTTGAAATCTCATGTCGTCCACGGTTTTTGGCTGGGTCTACCAGCTAAATTTTGCAACAAGCATCTCCCAATGTACGACACTGTAATTGTGCTAGAAGATGAGAATGGAGACAACCATGATACAAATTATCTCGGTGCCAAGCAGGGACTGAGTGGTGGCTGGAGAGGTTTTGCAATGAAGCATGTTATTAAGGTTGGTGATGCTGTGGTATTTGAGCTTATGGGATCAACAATACTGCCTGGTTCAAAGGAACCACCAAAATTTAAGACATACATAGTAAGGGCAAATGAATTTACAACAACTGATGGAGCTGTCAGTCTGCTGAATTTGGACGTGTGCAAGGAAGGGAATCTATCGAGTAGCCCAGAAGAAGAAAGTGCTGGTGAGTTTAAGTCTGAGGATCTGAAGGTTAACACAAACAGAGTCCATGGCGAAGTACCTCTGATTGATGCCAATGGCCTAGTCAGCGAAGCAATAGATGGCATCAGAATGCTAGACTATGATATTGAGTTTGAGGACGTGACAAGCTTGAGCAAGTTCAAAATTGTCGTAGACCGCTTGGTCATCGACTGCAAATTTGATAAGGACCTACGCAGGACATACTACGACCTCTGCTGCTCCCAGAAGGCGTTCCTTCACAAGCATCTGCTGAAGCAGTTGAATCTCACCCTTGTTGTGGGTGTGATAATGGAAACGATCAACATCGCTGAAGGCATCAGGGCCTGCAAGACTGAAGGTTCGTCTCGTGAGGACTTGCTGATTTGGAAGAAGACCCTCGAGTCCTTTGAGCTTCTGGGAATGGACGTTGCGTTCTTGTTGAAACGTATCAATGCGCTACTTGGCCTCCTCCAAACTCCGTCAGGAGGTCTTTCAAAGTTGAGGCTCGAGTGCGCCCATGCCGTGGAGAAAGCGAAGGCTCTTGAGCTTGAGCTGTCGGGTGTGAAGGATGTGCTGCGCAGAATGGATGCAGAGATGAAGGATATGGAATCTAGTGTGAAGAAGAGCGATGCAGCACTGAAGCAGCTGGCAACCGCGCCATGGTGA
Protein Sequence:
- >462927948|Eragrostis_tef|B3|462927948
MEALMFEALVREFRPSYIFMHGELLRRRWSSLRCWRQVSEEDLDRKRGRPAGSKSAKSKMERKMDLVKERLAMLDSTDSSSSSSSSENDNDEDFVPMDDELAIVVDHQPIDIHYDDTNDEKKVIPKKVCDVRGRNISASFRGDCGSAMARAKELQSKLPQQHPSFVKEMLKSHVVQGFWLGLPAKFCNKHLPMYDTVIVLEDENGDNHDTNYLGAKQGLSGGRRGFAMKHGQRSGGENQKSPKAFELQDSSSAGAMAIDQSLKASSFLPLPPLLQRKRGRPAGSKSAKSKMERKMDLVKERLAMLDSTDSSSSSSSSENDNDEDFVPMDDELAIVVDHQPIDIHYDDTGDEKKVIPKKVCDVRGRNISASFRGDCGSAMARAKELQSKLPQQHPSFVKEMLKSHVVHGFWLGLPAKFCNKHLPMYDTVIVLEDENGDNHDTNYLGAKQGLSGGWRGFAMKHVIKVGDAVVFELMGSTILPGSKEPPKFKTYIVRANEFTTTDGAVSLLNLDVCKEGNLSSSPEEESAGEFKSEDLKVNTNRVHGEVPLIDANGLVSEAIDGIRMLDYDIEFEDVTSLSKFKIVVDRLVIDCKFDKDLRRTYYDLCCSQKAFLHKHLLKQLNLTLVVGVIMETINIAEGIRACKTEGSSREDLLIWKKTLESFELLGMDVAFLLKRINALLGLLQTPSGGLSKLRLECAHAVEKAKALELELSGVKDVLRRMDAEMKDMESSVKKSDAALKQLATAPW