Information report for 462880768
Gene Details
Functional Annotation
- Refseq: XP_002460861.2 — B3 domain-containing protein Os07g0563300 isoform X2
- Swissprot: Q0D5G4 — Y7633_ORYSJ; B3 domain-containing protein Os07g0563300
- TrEMBL: A0A1B6QF04 — A0A1B6QF04_SORBI; Uncharacterized protein
- STRING: Sb02g036430.1 — (Sorghum bicolor)
- GO:0003677 — Molecular Function — DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Oryza sativa: GD1
- Panicum virgatum: Pavir.2KG489400.1.p
- Setaria italica: Seita.2G353300.1.p
- Setaria viridis: Sevir.2G364100.1.p
- Zea mays: GRMZM2G008356_P01
Sequences
CDS Sequence:
- >462880768|Eragrostis_tef|B3|462880768
ATGGCGCCCACCGGATCTACGTGGAGTGATCGCCACGTCGGTGCGATTTCGCTGGATACGCGGGGGTTCGAGCAGGGGATATACTGCGAGACTTTTCACTCGGAGGAGGGCGGATGGAGGAACTGCGAAACCTGCGGGAGGAGGGTGCATTGCGGGTGCATCGTGTCTATCCACAAGTACCAGCTGCGGGATGCCGGTGGAGTTGATTGTGCCAAGTGTGCTCGCAATACCCGTACTGCCATGGCACCACCGAATCCGGTATGGTCACCCTCTATGCATGTGCCTCAGAATGTACCTGACAGAAAGGACAATCCTGTAAAGACCTGGAGACCTCCTGCTGGTCAAATTTCAAGTCAGTGGCGACAGACTAATATGTGGAGTGTGTCCAGTGTACAGTCAGACTTGCAGCAGCGTCTAGCTTTTGAATTCGATAGACCCAGTGGTAGCGAAAAATTACTTCCTGGGCGCACTTTTATTCAGGCCCATGAAAGGAAGTTTGATGACATGCATGACAGACCAACAACACCAGCCAGCATGAACCATCTCATGAGGGAGAGAGATGCCAATGGCCAGCCTGCCACTCTTGATCCATCATACCCTTATGCCCTGTACCACAGGGAAGGTCCGCATCCAAACTGTGTTAATGATCCTAGTCACCATGGAGGAGAAAATGAAAGGAGAATGGCAGTACCAGATGCGTCGACAGGTTTAGATGCTGGCTTCAAGCATGATTCACATCACCCATCCCTGTTAAAGGATGATCAGCCATCTCTTTCAGTTGGGTTGCCTTCTAATTTTGCATCAGCAAATGGTCCTAAAGACCATATCAGAATTGCACCTAATCAGCAGCAAGCACAGATGGCTTCCCCCCCTGTGCCAAAAACGTTTTACACTATGGGCGGTAAAGCGTATACGTATAATGATTTCCCGCACCAAATGTCCAATGGAAGACCTAGAATGGATGCAAAGGCGAGGTCTCAATTACTTCCCCGCTATTGGCCTAGAATATCAGATCAAGAACTACAACACTTGTCTGGAGATTCGCATTCTGTTGTTACTCCTTTGTTTGAAAAGATGTTGAGTGCTAGTGATGCTGGACGGATTGGTCGTTTGGTGTTGCCCAAGAAGTGTGCTGAGGCATACTTTCCTCCAATCTCTCAGCCTGAAGGGCTCCCCTTAAAGGTTCAGGATGTTAGTGGTAAAGACTGGATATTTCAGTTCCGATTCTGGCCTAATAATAACAGCAGGATGTATGTATTGGAAGGTGTTACACCGTGCATTCAATCAATGCAGTTGCAAGCTGGTGATACAGTAACCTTCAGCCGAATTGACCCAGAAGGGAAACTGGTCATGGGTTTCAGGAAGGCAACAAATCTTTCTTCCGAACAGGAGCAAACAACAAAGCCTGCCAATGGTGCCCCAGCATCTTCGGAGGCAAATGGTAAAGTTTCTGCTCCAGATTCGAGTCCAAATGCTGCAGTTTCCCGACAAAATAAAGTCAACACAGAGAACAATAGCTCTAGCCCTGTGGAACAACCCTCTGCTTCTAAAATGGACAAAGGGGGATCATCACAGAAGGATGGACCAGGAACTGGTCAATCTTCCCCAGGACCTGGCAAGAGAAAAGCAACTTCTGTTGGTCAAAAAATTAAGCGACTGCGGATGGATAATGAGGAATCAATGGAACTGAAGATAACATGGGAAGAAGCTCAAGAATTGCTTCGCCCTCCTCCTAAGGCCCCCTCCATCGTTGTTGTTGAAGGCCATGAGTTTGAGGAATATGAGGAGCCTCCAATACTCGGTAGGAAGACATATCTTGTGGCAGACAAATCCGGGACTACTCATCAATGGGCTCAGTGTGAGGATTGTTCCAAATGGCGGAAACTGCCAGCCGACGTCCTGATGCCTTCTAAATGGACCTGCTCTGACAATAAACGGGATCCAGAAAGATCTTCCTGCGAATCTGTACAAGAGATAAGTATGGAGGAGCTTGCAGAATTGATACCTATAAAATATGGTCCAGGAGCAAAAAAGCTCAAAGGAAAGATAGATCCGGACACCATTGATGCTTCCGATGGATTAGATACGCTTGCAAACCTTGCTATTCTTGGTGAGGGTGAAGCAATTCCTTCGCAGCCAACAACAAAACATCCACGTCACCGTCCTGGCTGCTCATGCATTGTATGCATCCAACCTCCAAGTGGGAAGGGCCCCAAGCACAAGCAGACATGCACCTGCAATGTCTGCATGACCGTTCGTCGCCGTTTCAGAACACTCATGCTTCGACGTGAGAAGCGCAAGGATACAGATTCACCTCGCAAGAAAGAAGCAGGCCAATCAAGTGAGGCGGTTTCACGAGCTGGATCTGTCCCACCGGCAGCAACCGGTGCGAGTACGACTAGCTCCCCTCAAAAAGCAGACCCAAATGCTGACGGGCCTGAAGACATGGCTGTAGATCATAAGATGACATCCTCTCCTGTCAAGAACCATATCGACCTGAACATTCAGCCTGACCGTGATGATGAGCAGTCACCAAAGGCTGATGCAGCTGGTGCGACAAGACTCCTTCGAGACAATCCGGCTTAG
Protein Sequence:
- >462880768|Eragrostis_tef|B3|462880768
MAPTGSTWSDRHVGAISLDTRGFEQGIYCETFHSEEGGWRNCETCGRRVHCGCIVSIHKYQLRDAGGVDCAKCARNTRTAMAPPNPVWSPSMHVPQNVPDRKDNPVKTWRPPAGQISSQWRQTNMWSVSSVQSDLQQRLAFEFDRPSGSEKLLPGRTFIQAHERKFDDMHDRPTTPASMNHLMRERDANGQPATLDPSYPYALYHREGPHPNCVNDPSHHGGENERRMAVPDASTGLDAGFKHDSHHPSLLKDDQPSLSVGLPSNFASANGPKDHIRIAPNQQQAQMASPPVPKTFYTMGGKAYTYNDFPHQMSNGRPRMDAKARSQLLPRYWPRISDQELQHLSGDSHSVVTPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDVSGKDWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRIDPEGKLVMGFRKATNLSSEQEQTTKPANGAPASSEANGKVSAPDSSPNAAVSRQNKVNTENNSSSPVEQPSASKMDKGGSSQKDGPGTGQSSPGPGKRKATSVGQKIKRLRMDNEESMELKITWEEAQELLRPPPKAPSIVVVEGHEFEEYEEPPILGRKTYLVADKSGTTHQWAQCEDCSKWRKLPADVLMPSKWTCSDNKRDPERSSCESVQEISMEELAELIPIKYGPGAKKLKGKIDPDTIDASDGLDTLANLAILGEGEAIPSQPTTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCMTVRRRFRTLMLRREKRKDTDSPRKKEAGQSSEAVSRAGSVPPAATGASTTSSPQKADPNADGPEDMAVDHKMTSSPVKNHIDLNIQPDRDDEQSPKADAAGATRLLRDNPA