Information report for 462858457
Gene Details
Functional Annotation
- Refseq: XP_025816069.1 — B3 domain-containing protein Os03g0120900-like
- TrEMBL: A0A2T7DHD3 — A0A2T7DHD3_9POAL; Uncharacterized protein
- STRING: Si005032m — (Setaria italica)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi2g48597.4.p, Bradi2g48597.3.p, Bradi2g48597.2.p, Bradi2g48597.1.p, Bradi2g48597.5.p
- Panicum virgatum: Pavir.5NG473800.1.p
- Setaria italica: Seita.5G302100.1.p
- Setaria viridis: Sevir.5G304700.1.p
- Zea mays: GRMZM2G313737_P01
Sequences
CDS Sequence:
- >462858457|Eragrostis_tef|B3|462858457
ATGGAGAGCCATCCAAGATTCTGCGCCGCGCTTCCGTTCGGCGCGCCTGCTGAGGTCTGCCTCCGCCCTCATTTACTCCCCAGCTTCACGCACCAGCGACCCCTCAAGACCCGGGCGGAAAAATCCGAGGGAGTGGAGGCAGATAGAAAGGAAGCATTCTGCATTGCCCACTCTGTCATGGAAGAGGCGAGGATGCCTCGGTTCTTCAAGGTCCTCGTCGGCGACTTTGCCCGCCGCATCGTGAGTTGCATCCTCTCCTCCTCCTCCTCCTCCAGTTGGCTTGGTTCCGGCGTTCACTGTTGCAAAGTTGCGATTTTTGGTCCCGCCGAACCCCTGGAGATACCACAAGCCTTCCTCTGCCATATTCCAGAGGAGAGCCGAAGAATATCTGAGAATACAATGGCCGCGTCTGCCCAACTTAAGAATGCTGAAGGGAAGGCTTGGCCTGTTGCGCTGGAGGAAACCAATGGTCGCGTATTTCTGACCACTGGATGGCCAAAGTTTGTTGAGGACAATTGTTTGAGAGAGGGTGAATTCCTTGTAGTCAAATCCGAAGCGAACTTGCATTTCATGGTTCTGGTGTTTGGTGTGAACGCTGTTGAGAGATCAGTTTGGTCTTCGAGAGGAGCTACCTGCAATTTGGATGGAAAACTCCCATGTGATATTTTTCCTTCTAGGAGGGGAAACAGTGGTGATCAATCAACGGAGATGCCCGCAAGTATCACTCATGGTCACTCACAGACAGTTACCTTGCAAAGTACTCAAAGGGACGACCATATTTCATCCCATGATGAGCTGGGAACATGCTTCTCATGTAAGTGGCCAATGGAGGATGATAAGGCTAAAGCAATAGCCAAAGTAATGAGAACGTTTGATATGGACAGATTGACCGTTGAATTATTCTGTGCCACGCTAGGTTTGTATAAATGGAATGTTGACACAGCTGCAGAGGAATTTGATGTTTGCAAGGGCAAACAACAAATTTCGCCAGAACTGTCTCTAAAGAAGAAACTTATCTTACACGGTAAGACAGCTCACAATATATCCTTTTGCTGTTCAGTTAGCTTTGTAAAGGAACAGCTACAGCACTTCTTCCCTCTAGACGACAATTCTTGTGCACCAATGCATGAGAGATGGAAGAACAAACTTGATATGCTTAACTTGTCAAATCAGTCACTACCTTGTGACTTGACACCAGCGAAGCGAAAGCTAGTTGACAAACATGAATCGTGTGATTTGTCACACCAACAAAAGCGGGGAGTAGGCAAGTTGCAACGAGGCTCACCACATACTGATACGCCGAGAAGATCACTGAGATTGGCACGCCTAAAGAATACTTCCGACTGGACAAATAACACATTGAAAGAAAGATCTGAAATTCTAGAACCATCTCTAACTCGAGAAAATCAGGTGAAGGATAGAGCAGACAAATCATGTTTACTTTATGAGAAACACGATTGTGTCTTGAAAGGAGTTCATGAGGAAGTAATAGGTTCCTTATCTCAGGATTTCAGGAAATTTCAGCCAATGCATAATCAGATAGAAAGCGGTGAAAAACAAACTGAAAGAAGTGCTTTGCTGACTTCTGAGACATTCATGAGTACAGGTAGCACAGAGACATGGTCATTGCCAACCAACTCAAAGTTGACATCAGATTCAAGAATAACTGAGTTATCTGTTACATGGAAGTCCTCACAACAGGGCAACCCCCTTGAGAACATTTTACTTGACATTGAAAGGGACAACTTTATGAACACCATCGCACACATTCAGAAAATAATTCGTGATGAGCTTCCAGATTTACAAACTGCAGATATAATTGAAAACATTGTGCGAACAGGGATTCCTAAATGGGACTTATGCCTTCGGGATAGCAATGCTCAGAAAATAGTGAATGTTGTGCTGGAGCATGCTAAAAAAGTCAAGGAGCGAAACAAATTCAATATTGATGTTAGGAAGGAAGAGTTTTCTGTAAAACTACAAGATCGATCAAAGTGGCAGCTTAAAGAAATGGAAACGGGTTACACTTCCTTGGAATTAGATTACAAGAAGGCAACTGCTGATGCTAGCATTTGCTTCTTGAAATTGGAAGAACACAGGAAAACACTGTGTGCTATTGAGGACGGTATCAAGGACTTGCAGCAAGACATGATGACGAAGGAAGATGAACTGCAAAAGTTGAGGCATCAAGTCTCTGAACATGAGACCATGTATCAAAAGTTGATAATGGAAAAGGTAAAGGTTAAGATGGCACTGAAGAGCTATCACAAGACTCTTGATGAAGTAAAAAGGAGTCTATCTTCAGATGAACCTAGTTCGATTGATGTTGAGGCATTGGTCAAGGTAGAGATGGATAATGCGTGTAAGGAGATTGAGCTTTCCAAGGGAATTATCATAAGTATTAACATCATGAAAGATCGATGTGCCACCACTATTGTGGTCCTTCCTGACATTATCCGATCAAGAGCTTCCTGCACCACTTGCTCTGACTGTGCATCAAGCGCGCTCGTTGCTTCATCAAGTAGTAGTATTGCTGGATTCCGGATTATTGCTCTTGCAATTGCAATTCTTTGCTTCTGTCCTCCTGAGAGCTGGATCAATATCCTATATATGCGAATACACAATACATTTGAGGCTAGTGATGAGCGTGTTACCTGTGAATTTTGTGGCGAGACAGATTTCCTATCTAGCACCTCAAATACTGAAGCAACTGCATTTGCTCCCTTTGCCAGGTCAGATGTCATGCTACCAGCGTCAGCAATCAGCTTTCCTGTGCTGACCAGGACGAAAAAGGTTTTGAAGACATCGCCCGCCGATATCTCCCCAGATTGTGCCAGCTTCCCACCATACCAGAAGTCCAGTGCCCATGTTAAGAATGAGAGGCAAGGTGACAATCCTGTGGTGATCCCTGCTACCCAAGACTTTTTCCTTGCTTTCTTCAATGGTTCCTCTTGTGCGCACTCAAAGAGCTGA
Protein Sequence:
- >462858457|Eragrostis_tef|B3|462858457
MESHPRFCAALPFGAPAEVCLRPHLLPSFTHQRPLKTRAEKSEGVEADRKEAFCIAHSVMEEARMPRFFKVLVGDFARRIVSCILSSSSSSSWLGSGVHCCKVAIFGPAEPLEIPQAFLCHIPEESRRISENTMAASAQLKNAEGKAWPVALEETNGRVFLTTGWPKFVEDNCLREGEFLVVKSEANLHFMVLVFGVNAVERSVWSSRGATCNLDGKLPCDIFPSRRGNSGDQSTEMPASITHGHSQTVTLQSTQRDDHISSHDELGTCFSCKWPMEDDKAKAIAKVMRTFDMDRLTVELFCATLGLYKWNVDTAAEEFDVCKGKQQISPELSLKKKLILHGKTAHNISFCCSVSFVKEQLQHFFPLDDNSCAPMHERWKNKLDMLNLSNQSLPCDLTPAKRKLVDKHESCDLSHQQKRGVGKLQRGSPHTDTPRRSLRLARLKNTSDWTNNTLKERSEILEPSLTRENQVKDRADKSCLLYEKHDCVLKGVHEEVIGSLSQDFRKFQPMHNQIESGEKQTERSALLTSETFMSTGSTETWSLPTNSKLTSDSRITELSVTWKSSQQGNPLENILLDIERDNFMNTIAHIQKIIRDELPDLQTADIIENIVRTGIPKWDLCLRDSNAQKIVNVVLEHAKKVKERNKFNIDVRKEEFSVKLQDRSKWQLKEMETGYTSLELDYKKATADASICFLKLEEHRKTLCAIEDGIKDLQQDMMTKEDELQKLRHQVSEHETMYQKLIMEKVKVKMALKSYHKTLDEVKRSLSSDEPSSIDVEALVKVEMDNACKEIELSKGIIISINIMKDRCATTIVVLPDIIRSRASCTTCSDCASSALVASSSSSIAGFRIIALAIAILCFCPPESWINILYMRIHNTFEASDERVTCEFCGETDFLSSTSNTEATAFAPFARSDVMLPASAISFPVLTRTKKVLKTSPADISPDCASFPPYQKSSAHVKNERQGDNPVVIPATQDFFLAFFNGSSCAHSKS