Information report for 353664
Gene Details
Functional Annotation
- Refseq: XP_020872305.1 — B3 domain-containing protein REM2 isoform X2
- Swissprot: Q3E9T2 — REM2_ARATH; B3 domain-containing protein REM2
- TrEMBL: D7MB45 — D7MB45_ARALL; Uncharacterized protein
- STRING: fgenesh1_pg.C_scaffold_7000837 — (Arabidopsis lyrata)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT4G31615.1, AT4G31620.1
- Brassica napus: GSBRNA2T00030135001, GSBRNA2T00099806001
- Brassica oleracea: XP_013620599.1, XP_013597030.1, XP_013591088.1, XP_013591092.1
- Brassica rapa: XP_009126794.1, XP_009126765.1, XP_009126756.1, XP_009126773.1, XP_009138028.1
- Raphanus raphanistrum: RrC282_p3, RrC519_p8
Sequences
CDS Sequence:
- >353664|Arabidopsis_lyrata|B3|353664
ATGGCGAATCCACTATCTTCTTCTCAATCCAACCGACCTTTCTTCGTCAGATCACTTGCTGGACACAACTCGAATCTAATAATTCCTGATGCGTTTTTCACGGCTCACTTGAAGGATAAAACTGGCTTAACGAAATTGAAACTGACTTCTGACGCTTCGGATAGAACCTGGGATGTGAAACTGAACGGCCGGAGATTCGCCGGCGGCTGGGATGATTTCTCCGCCGCACACTGTCTTCGAGACGACGACGTTTTGGTTTTCAGACACGACGGGAAAATGAGTTTTTCAAAACATTTTTCGAGAACAAATGGTTTGACCAAGAGATGGTGTGTGATTGATCTAATGAATCTAAGTGGGGAATCATGGGCTCTGGGCCTGCGACACAACAACAGAACTGGTCAGGATTATATCCGTGGACACTGGAGAAGTTTCTGCCGTGCAAATGAGATGAAACCCGGATCTTCCTACCGGTTTAAGCTTGTCCGGAATGGGACAAGGCCTTTGCTACGGTTGTGTTCTGAAGTTATTCCAGAAGGAAACCGTTCCAGAGCAAATGGAAAAGATAATGTTTCGGAAAAGTATAGCAGGGCAGCTGGGAGTGCTTCAACGAAGCAGAACAAGTTTCTGACCGTAACCTTTAAGCATTACATGATCCAGTCAGGACACCTTCGTCTTCCGAGATCATTTGCGAGGGAGAACGGGATCAAGGAGGCAGAAGAGATAATTCTAGTGGACAAAAATGGAGTAAAGTGGCCATCCTATGTAGCTTCTGCCAAACAACGAGGAGAGTTTTACATGGCACATGGTTGGAAAAGGTTTTGTGAAGCCAATAAGTTAAACACGGGAGACACCTTCACTTTGGAGTTTGTTCGAGGAGAAGACACAACTCCTATGCTCAAGTTCTGCTCCAAGGCCAAGGTCAAGATAGAACAAGAAGAGGCTCCAGAAGAGACGGAGACTCCGTTTCAAAAGAGAGCTCGAGTGTCTGCAGAAGTAGGACACTCTCGTCGCACTCAGACACCAAACAAAGCCAGTCATGATCCAAAAATCTTGCAGCGCAAGCAACCACTTCAACCCTGCTCATTCTCTGACCAAGCGAAAAAGGTGAAACAGAGTATTGTAAACATTTTAACTGGTATAAAACGGTTTCGGTCAGAGCTCGAGATAAAGGAGCAGAGTTTAGAAGCTGCGCTGCTGGAAATCGACGCCTTAGTGTTGAATATAAACAGGGGAGAAAGTATCGGAAATCAACAAAATCCTCAAGTAATCATCAAGTCTAGAAGTGAAGTGAAGATTAGGAAATGGAACATGAACTTTTGCAAACCTTGTTTGTATCTAGAACTCGTTCAACAATCGAGACAAATGATTCCTGCTGAGTTTTTTTCGACTTACGTAGAAGGTAAAAACCAGTCTACAAAACTGAAACTGACCTCGGACGCTTTGGATAGAACCTGGGAAGTGAAATTGAACGGCCGCAGATTCGCCCGCGGCTGGGAAAATTTCTCCACCGTACACTCTCTCCAAGACGACGACGTTTTGATTTTCAGGGAAATCGGGGACATGACCTTTCACGTCACAGCCTCCGGTCGCAGTTTCTGTAAGGTACAGTACATATCCTCTGACGAGGATGGGGCTGATGAAGATGATGCATGGACCGAGTATTCAGATTCCAAAAACATTGCGTCGAAGAAGAAGCCAAGAACAGAAGCAAAGTCTTCATCCAAAAACTCTTATCTTGTTGCGCACGTCACGTCTTCAAACCTAAGCCGAGATAGATTGTCTCTTATAAAGGGTTTTGCGAGGTCAAATGGCCTGAACCAGAGATGCTGTGAGATTGATCTAATGAATCAACATGGAAAATCATGGACAGTTGGTCTGAGATACAGTACAGCAAATGAGCAGGCTAGTATTAGTGGAGGCTGGAGAGACTTCTGCTTAGCAAATGGGTTAGAAGCTGGATCTTTCTACAGGTTTAAGCTTGTCCAAAACGGGGCAAGGCCTTTGCTACGGTTGTGTTCCGAAACTATTCCAGAAGAAGACTGTTACAAAGGAAACAGAAAGGAAATTTTTTCAGAGAGTGCTTCAATGAAGCAGAGCAAGTTTTTGACAATGACCTTTAAGCCTTACATGCTCAAGTCAGGTCAACTTCATATTTCGAGACCCTTTGCTATAGAGAATGAAATAAAGGAGGCAGAAGATATAACTCTAGTGGACAAAAATGGAGGAAACTGGCCATCCTATGTAGCTTCTGGTGATGGTCAAGGAGGAAAGTATTATTTGGCAAAAGGTTGGAGAGGTTTTTGTGCAGCCAATAGGTTAAAGACGGGAGAGACCTTCACGTTGGAGTTTGTTCGAGGAGAAAGCACAACTCCAATGCTCAAGTTCTGCTCCAAGACCAAGATAGAACAAGTACCATTAGATGAAGAAAGAGAGACTCAAGAAGAAACGGAGACTCGGGTCGAAAAGAGAGCTCGAGTTTCTGCAGGAGGAGGATCTTCACGCCGCAATCAGGCATCAAACAAACCCAATGCTGATCCACAAAACTTGAAGCCTAGGCAACCACCTTGCTCAATCTCTGATCGAGTGCAAAAGGTGAAACAGATTATTGAGGACACTTTAACCGGGGTAAAACGGATTCGGTCAGAGCTTGAAGTAAAGGAACAGAATTTAGAAGCTTCGATATTGGAAATTGATGCTTTAGGGGAGAAAGTGTTGGAAATCAACAAAATCCTCAAGTAA
Protein Sequence:
- >353664|Arabidopsis_lyrata|B3|353664
MANPLSSSQSNRPFFVRSLAGHNSNLIIPDAFFTAHLKDKTGLTKLKLTSDASDRTWDVKLNGRRFAGGWDDFSAAHCLRDDDVLVFRHDGKMSFSKHFSRTNGLTKRWCVIDLMNLSGESWALGLRHNNRTGQDYIRGHWRSFCRANEMKPGSSYRFKLVRNGTRPLLRLCSEVIPEGNRSRANGKDNVSEKYSRAAGSASTKQNKFLTVTFKHYMIQSGHLRLPRSFARENGIKEAEEIILVDKNGVKWPSYVASAKQRGEFYMAHGWKRFCEANKLNTGDTFTLEFVRGEDTTPMLKFCSKAKVKIEQEEAPEETETPFQKRARVSAEVGHSRRTQTPNKASHDPKILQRKQPLQPCSFSDQAKKVKQSIVNILTGIKRFRSELEIKEQSLEAALLEIDALVLNINRGESIGNQQNPQVIIKSRSEVKIRKWNMNFCKPCLYLELVQQSRQMIPAEFFSTYVEGKNQSTKLKLTSDALDRTWEVKLNGRRFARGWENFSTVHSLQDDDVLIFREIGDMTFHVTASGRSFCKVQYISSDEDGADEDDAWTEYSDSKNIASKKKPRTEAKSSSKNSYLVAHVTSSNLSRDRLSLIKGFARSNGLNQRCCEIDLMNQHGKSWTVGLRYSTANEQASISGGWRDFCLANGLEAGSFYRFKLVQNGARPLLRLCSETIPEEDCYKGNRKEIFSESASMKQSKFLTMTFKPYMLKSGQLHISRPFAIENEIKEAEDITLVDKNGGNWPSYVASGDGQGGKYYLAKGWRGFCAANRLKTGETFTLEFVRGESTTPMLKFCSKTKIEQVPLDEERETQEETETRVEKRARVSAGGGSSRRNQASNKPNADPQNLKPRQPPCSISDRVQKVKQIIEDTLTGVKRIRSELEVKEQNLEASILEIDALGEKVLEINKILK*