Information report for cra_locus_323_iso_8
Gene Details
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Functional Annotation
- Refseq: XP_016491208.1 — PREDICTED: AP2-like ethylene-responsive transcription factor TOE3 isoform X8
- Swissprot: A0A0N7KJT8 — APL25_ORYSJ; APETALA2-like protein 5
- Swissprot: B8AVJ9 — APL25_ORYSI; APETALA2-like protein 5
- Swissprot: P47927 — AP2_ARATH; Floral homeotic protein APETALA 2
- TrEMBL: A0A1S4BQY5 — A0A1S4BQY5_TOBAC; AP2-like ethylene-responsive transcription factor TOE3 isoform X8
- STRING: XP_009589846.1 — (Nicotiana tomentosiformis)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0006412 — Biological Process — translation
- GO:0006633 — Biological Process — fatty acid biosynthetic process
- GO:0009060 — Biological Process — aerobic respiration
- GO:0015979 — Biological Process — photosynthesis
- GO:0015992 — Biological Process — proton transport
- GO:0018298 — Biological Process — protein-chromophore linkage
- GO:0022904 — Biological Process — respiratory electron transport chain
- GO:0046034 — Biological Process — ATP metabolic process
- GO:0005840 — Cellular Component — ribosome
- GO:0009522 — Cellular Component — photosystem I
- GO:0009535 — Cellular Component — chloroplast thylakoid membrane
- GO:0016021 — Cellular Component — integral component of membrane
- GO:0000287 — Molecular Function — magnesium ion binding
- GO:0003677 — Molecular Function — DNA binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0003735 — Molecular Function — structural constituent of ribosome
- GO:0004129 — Molecular Function — cytochrome-c oxidase activity
- GO:0004519 — Molecular Function — endonuclease activity
- GO:0004857 — Molecular Function — enzyme inhibitor activity
- GO:0005506 — Molecular Function — iron ion binding
- GO:0005507 — Molecular Function — copper ion binding
- GO:0005515 — Molecular Function — protein binding
- GO:0005524 — Molecular Function — ATP binding
- GO:0008137 — Molecular Function — NADH dehydrogenase (ubiquinone) activity
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0016168 — Molecular Function — chlorophyll binding
- GO:0020037 — Molecular Function — heme binding
- GO:0051539 — Molecular Function — 4 iron, 4 sulfur cluster binding
Family Introduction
- The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding. These three families have been defined as follows. The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, in addition to the single AP2/ERF domain.
- It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
- Genes in the AP2 family have been shown to participate in the regulation of developmental processes, e.g. flower development, spikelet meristem determinacy, leaf epidermal cell identity, and embryo development.
- Using an in vitro selection procedure, the DNA binding specificity of the two AP2 repeat containing protein ANT was found to be 5’-gCAC(A/G)N(A/T)TcCC(a/g)ANG(c/t)-3’. This consensus site is much longer than sites recognized by proteins containing a single AP2 repeat and neither AP2 repeat of ANT was alone capable of binding to the selected sequences, suggesting that both AP2 repeats make DNA contacts.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >cra_locus_323_iso_8|Catharanthus_roseus|AP2|cra_locus_323_iso_8
Protein Sequence:
- >cra_locus_323_iso_8|Catharanthus_roseus|AP2|cra_locus_323_iso_8
XQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPSIYDNEFINSTESSSGNVADHNLDLSLGSSSASSKRISNREQQQQSGSTQFQVDWRQQQGLKSKQQANMVDAEENPRSREGYNEADTLQLLSQTHLX