Information report for VAHOX1
Gene Details
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Functional Descriptions
- A tomato HD-zip I transcription factor, VAHOX1, acts as a negative regulator of fruit ripening.
- VAHOX1, a member of the tomato HD-Zip I subfamily, was expressed in all tissues, was highly expressed in breaker+4 fruits, and could be induced by ethylene. RNAi repression of VAHOX1 (VAHOX1-RNAi) resulted in accelerated fruit ripening, enhanced sensitivity to ethylene.
- VAHOX1 affects ethylene sensitivity in tomato.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 544109
- UniProt accessions: A0A3Q7FRX5
- AlphaFoldDB: A0A3Q7FRX5
- EnsemblPlants: Solyc03g113270.3.1
- Gramene: Solyc03g113270.3.1
- KEGG: sly:544109
- GO: GO:0000981 , GO:0005634 , GO:0043565 , GO:0045893
- OMA: AFWSWSY
- InterPro: IPR000047 , IPR001356 , IPR003106 , IPR009057 , IPR017970 , IPR045224
- PANTHER: PTHR24326 , PTHR24326:SF601
- SUPFAM: SSF46689
- PROSITE: PS00027 , PS50071
- Gene3D: 1.10.10.60 , 1.20.5.400
- OrthoDB: A0A3Q7FRX5
- Pfam: PF00046 , PF02183
- SMR: A0A3Q7FRX5
- CDD: cd00086
Sequences
cDNA Sequence
- >Solyc03g113270.3.1
GTTCTGGAACTTGGCTATCTTTTTTTTTTTGGTTCATAATCATATCCTTGTATTGAATTTGTAAGCAAGGGTGATGATGTTTATGGTGATCGGCAGTAGGTGCTCTCACACTTCCCACATCACTGAAATCATAATCACAAGCTTCTTTCGCCACAAGCTATAGATCTTTACTAATTCCATATAGTATATAGTTTTAATACAAGAATACAATATATATATATATATTAAAGGGGGTATTTATCAAGAACCCCAAATTCTTAATTACATAACGAAACGAGCGGATATGGGTGTTTCTTGAAAAGATCTCTGTTTTATAATTTAAAAAAATTTGTCTGTAGAATTCGAAGCTATGATGGCTCCAGGGATTCTCTATGGTGGTTCTTCTAATTTCGATGGCGTTTTTACTCAAAAACAGAGAGACGTGTTTTCTTCATCTACTGCACCGAAAGGGCATCTTGGTTCCCTTTTTGCCCCTGCCTCTTCTTCTTCTAATTTCTTGGGATCCAGTTCTATGGTGAGTTTTCGCGGTGTTAATGGAGGGAAGAGATCATTCTTTGATTCGTTCGATCAGGATGACAATGAAGCTGATGAATTGGGGGAATATCTTCATCAAGCGGAGAAGAAGAGGCGACTTACTGACAACCAAGTTCAGTTTCTTGAGAAGAGTTTTGGGGAAGAGAACAAACTTGAACCAGAAAGAAAAGTTCAGCTTGCTAAAGAACTTGGTCTGCAGCCTCGCCAAATTGCAATTTGGTTTCAGAATCGTCGTGCGCGATGGAAGACTAAGCAGCTCGAGAAAGATTATGATGAATTGAGGAATAGATACGATACTCTGAAATCAAATTACAATAATCTTCTCAAGGAAAAAGAAGATCTTCGAACTGAAGTTTTCCGTCTCACCGGTAAGCTGTTTATCAAAGAGAAAGGAAATGGGCAATTGGATTTGCGCGATGAACACAAACACTCCAATGCATTGGCAAAAGAAACCGTGGTTGATCCAATGTCCAATGTACCAGCTCTGGTTGTTAAGCACCAGCAGGAAGATTTAAGCTCTGCTAAGAGTGATGTTTTCGACTCAGAAAGCCCACGTTACACCAGTAGAATGCATTCCTCAGTCGTAGATCAGGATGATTCTGCTCGCGCATTTGAAACTGATCAGTCGGATTCATCTCAGGATGATGATGAAAACTTCAGCAAGAATATGCTTTCTACTGCCAACCTACTTGGCAAAGACGCGGATGATGATTATCCCGCGACATCATCAAATTTGAGTTACTTTGGATTTCCAGTTGAAGACCAAGGTTTTGGTTTCTGGACTTATTAAGTTAAAAAAAATGTTTGTATTTGATTAGTAGTAATGCAGAATACTATTTAATGTGTCCTAGTAATATGTCATATATTTGGAGACATTGTATAGAAAGCACATTTCTGTAATAAATAAAGTCCAATGTATGGGTCCAAGAATAGTAATGAGTTCTGGTCACAAAACAGTTTGGAACTATGGCTATTGCGCTTTGCATACCTGTTGTGTAGGCTCTAGCTGGTGCTTTATATGTTGTGAAATTACGTTATTGAATTCACTATTAGTGATCACAATTCTATTATACCATGACCAA
CDS Sequence
- >Solyc03g113270.3.1
ATGATGGCTCCAGGGATTCTCTATGGTGGTTCTTCTAATTTCGATGGCGTTTTTACTCAAAAACAGAGAGACGTGTTTTCTTCATCTACTGCACCGAAAGGGCATCTTGGTTCCCTTTTTGCCCCTGCCTCTTCTTCTTCTAATTTCTTGGGATCCAGTTCTATGGTGAGTTTTCGCGGTGTTAATGGAGGGAAGAGATCATTCTTTGATTCGTTCGATCAGGATGACAATGAAGCTGATGAATTGGGGGAATATCTTCATCAAGCGGAGAAGAAGAGGCGACTTACTGACAACCAAGTTCAGTTTCTTGAGAAGAGTTTTGGGGAAGAGAACAAACTTGAACCAGAAAGAAAAGTTCAGCTTGCTAAAGAACTTGGTCTGCAGCCTCGCCAAATTGCAATTTGGTTTCAGAATCGTCGTGCGCGATGGAAGACTAAGCAGCTCGAGAAAGATTATGATGAATTGAGGAATAGATACGATACTCTGAAATCAAATTACAATAATCTTCTCAAGGAAAAAGAAGATCTTCGAACTGAAGTTTTCCGTCTCACCGGTAAGCTGTTTATCAAAGAGAAAGGAAATGGGCAATTGGATTTGCGCGATGAACACAAACACTCCAATGCATTGGCAAAAGAAACCGTGGTTGATCCAATGTCCAATGTACCAGCTCTGGTTGTTAAGCACCAGCAGGAAGATTTAAGCTCTGCTAAGAGTGATGTTTTCGACTCAGAAAGCCCACGTTACACCAGTAGAATGCATTCCTCAGTCGTAGATCAGGATGATTCTGCTCGCGCATTTGAAACTGATCAGTCGGATTCATCTCAGGATGATGATGAAAACTTCAGCAAGAATATGCTTTCTACTGCCAACCTACTTGGCAAAGACGCGGATGATGATTATCCCGCGACATCATCAAATTTGAGTTACTTTGGATTTCCAGTTGAAGACCAAGGTTTTGGTTTCTGGACTTATTAA
Protein Sequence
- >Solyc03g113270.3.1
MMAPGILYGGSSNFDGVFTQKQRDVFSSSTAPKGHLGSLFAPASSSSNFLGSSSMVSFRGVNGGKRSFFDSFDQDDNEADELGEYLHQAEKKRRLTDNQVQFLEKSFGEENKLEPERKVQLAKELGLQPRQIAIWFQNRRARWKTKQLEKDYDELRNRYDTLKSNYNNLLKEKEDLRTEVFRLTGKLFIKEKGNGQLDLRDEHKHSNALAKETVVDPMSNVPALVVKHQQEDLSSAKSDVFDSESPRYTSRMHSSVVDQDDSARAFETDQSDSSQDDDENFSKNMLSTANLLGKDADDDYPATSSNLSYFGFPVEDQGFGFWTY*