Information report for SlGT30
Gene Details
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Functional Descriptions
- CRISPR/Cas9 edited SlGT30 improved both drought resistance and fruit yield through endoreduplication.
- SlGT30 gene with CRISPR/Cas9 technology and found that the knockout lines showed decreased stomata density in the leaves and large fruits.
- Subsequent examination revealed that cell ploidy was impacted in the leaves and fruits of SlGT30 knockout lines.
- SlGT30 knockout affected cell size through the endoreduplication pathway, manifested in decreased stomata density and reduced water loss.
- SlGT30 represents a promising candidate gene for gene editing in breeding practice.
Functional Keywords
- resistance , drought , yield , breeding , drought-resistance , stomata , water-loss , fruit-size
Literature and News
Gene Resources
- NCBI ID: 101262765
- UniProt accessions: A0A3Q7IP07
- AlphaFoldDB: A0A3Q7IP07
- EnsemblPlants: Solyc11g005380.2.1
- Gramene: Solyc11g005380.2.1
- KEGG: sly:101262765
- GO: GO:0005634 , GO:0006355
- OMA: LWEDISC
- InterPro: IPR001005 , IPR044822
- PANTHER: PTHR21654 , PTHR21654:SF14
- PROSITE: PS50090
- Gene3D: 1.10.10.60
- OrthoDB: A0A3Q7IP07
- Pfam: PF13837
- SMR: A0A3Q7IP07
- CDD: cd12203
- STRING: 4081.A0A3Q7IP07
Sequences
cDNA Sequence
- >Solyc11g005380.2.1
ATGCTAGAAAGTTCTGTTTTGTTGGAGAATACAGCTGCTGGTGGCGCCGTCACCGGCGCCGATGGTGAAGCGTCGGAGCTGAAGAATGAAGGTGGTGGTGGTGGTGGAAGTGTCGGTGGAGGTTCAGAGGAAGAAGATAAGAATTTTTCAGGTGGAAATCGTTGGCCACATGAAGAAACTTTGGCTTTACTCAAAATAAGATCGGAAATGGATGTTGCATTTCGTGATTCCAATCTCAAAAGCCCTCTCTGGGATGAAATTTCTAGGAAGATGGCTGAGCTTGGGTATAATCGAAATGCGAAGAAATGCAGGGAGAAGTTTGAGAACATTTATAAGTATCATAAGAGAACTAAAGATGGTAGATCTGGTAGACAAACTGGGAAAAACTATCGATTTTTCGAGCAATTAGAGCTTTTAGATAGCCAATCCTTGTTTTCATCGCCTCCATTAAACCATAGCCAAATCAATAGAATGGAAACAATGCCTGTACCAATGCCTATGCCAATGACAATGATAAAACCAGCTGCTAGTGGATGTCAGGATTTTGGAATGGATCATAGTCGAGTTCGGGGTTTTAATCCGGGGTTCATGTCCACATCCACGTCCACGACCTCGTCCTCGGGGAAAGAATCCGATGGTAGTGTGAAGAAGAAAAGGAAATTGGCTAGTTATTTTGAGAGGTTGATGAAGGAAGTGTTGGATAAGCAAGAGGACTTGCAAAACAAGTTTCTAGAAGCAATGGAAAAATGTGAGAAGGATCGAATAGCGAGGGACGAGGCTTGGAAGATGCAGGAAATCGCGAGATTAAAGAAAGAACAAGAAGCATTAGCTCACGAAAGAGCAATTTCTGCCGCGAAAGACGCAGCAGTGATTGCTTTCTTGCAGAAAGTCTCAGATCAAACCATTCAACTACAGTTACCAACAGATTTACCCCATAGGCATACCGAGGAACGAGAGAGTGAATCAATGAAAACTATTGGAAATCAGGAGAATGTTGTTATGCAACAAGACAACGACAAGGAAAACATTGACAAACAAGAGATTGATAGTGCTGGTGAGAATTCAAACTCGTTTCAAACGAATTCATCTTCTCGATGGCCTAAAGCCGAAGTGGAAGCCTTAATCAAGCTAAGAACAAACGTCGACTTGCAATACCAAGACAACGGCTCATCAAAAGGGCCTCTTTGGGAAGACATCTCATGTGGTATGAAGAAGCTTGGATACGATAGAAACGCGAAGAGATGTAAAGAGAAATGGGAGAACATAAACAAGTACTATAGAAGAGTTAAAGAAAGCCAAAAGAAAAGGCCAGAAGATTCAAAAACATGTCCATATTTTCATCAATTGGATTCCATCTATCAAAACAAGTCCAAGAAACAATTGCCCATTATGGAAACTCCGGGTTCGAATATGAAGGCCGGAGAGATACTAATGCAAATAATCAACCAACAACAGCAACAACAAGCATTAGAAAGAACAGAATGTTGA
CDS Sequence
- >Solyc11g005380.2.1
ATGCTAGAAAGTTCTGTTTTGTTGGAGAATACAGCTGCTGGTGGCGCCGTCACCGGCGCCGATGGTGAAGCGTCGGAGCTGAAGAATGAAGGTGGTGGTGGTGGTGGAAGTGTCGGTGGAGGTTCAGAGGAAGAAGATAAGAATTTTTCAGGTGGAAATCGTTGGCCACATGAAGAAACTTTGGCTTTACTCAAAATAAGATCGGAAATGGATGTTGCATTTCGTGATTCCAATCTCAAAAGCCCTCTCTGGGATGAAATTTCTAGGAAGATGGCTGAGCTTGGGTATAATCGAAATGCGAAGAAATGCAGGGAGAAGTTTGAGAACATTTATAAGTATCATAAGAGAACTAAAGATGGTAGATCTGGTAGACAAACTGGGAAAAACTATCGATTTTTCGAGCAATTAGAGCTTTTAGATAGCCAATCCTTGTTTTCATCGCCTCCATTAAACCATAGCCAAATCAATAGAATGGAAACAATGCCTGTACCAATGCCTATGCCAATGACAATGATAAAACCAGCTGCTAGTGGATGTCAGGATTTTGGAATGGATCATAGTCGAGTTCGGGGTTTTAATCCGGGGTTCATGTCCACATCCACGTCCACGACCTCGTCCTCGGGGAAAGAATCCGATGGTAGTGTGAAGAAGAAAAGGAAATTGGCTAGTTATTTTGAGAGGTTGATGAAGGAAGTGTTGGATAAGCAAGAGGACTTGCAAAACAAGTTTCTAGAAGCAATGGAAAAATGTGAGAAGGATCGAATAGCGAGGGACGAGGCTTGGAAGATGCAGGAAATCGCGAGATTAAAGAAAGAACAAGAAGCATTAGCTCACGAAAGAGCAATTTCTGCCGCGAAAGACGCAGCAGTGATTGCTTTCTTGCAGAAAGTCTCAGATCAAACCATTCAACTACAGTTACCAACAGATTTACCCCATAGGCATACCGAGGAACGAGAGAGTGAATCAATGAAAACTATTGGAAATCAGGAGAATGTTGTTATGCAACAAGACAACGACAAGGAAAACATTGACAAACAAGAGATTGATAGTGCTGGTGAGAATTCAAACTCGTTTCAAACGAATTCATCTTCTCGATGGCCTAAAGCCGAAGTGGAAGCCTTAATCAAGCTAAGAACAAACGTCGACTTGCAATACCAAGACAACGGCTCATCAAAAGGGCCTCTTTGGGAAGACATCTCATGTGGTATGAAGAAGCTTGGATACGATAGAAACGCGAAGAGATGTAAAGAGAAATGGGAGAACATAAACAAGTACTATAGAAGAGTTAAAGAAAGCCAAAAGAAAAGGCCAGAAGATTCAAAAACATGTCCATATTTTCATCAATTGGATTCCATCTATCAAAACAAGTCCAAGAAACAATTGCCCATTATGGAAACTCCGGGTTCGAATATGAAGGCCGGAGAGATACTAATGCAAATAATCAACCAACAACAGCAACAACAAGCATTAGAAAGAACAGAATGTTGA
Protein Sequence
- >Solyc11g005380.2.1
MLESSVLLENTAAGGAVTGADGEASELKNEGGGGGGSVGGGSEEEDKNFSGGNRWPHEETLALLKIRSEMDVAFRDSNLKSPLWDEISRKMAELGYNRNAKKCREKFENIYKYHKRTKDGRSGRQTGKNYRFFEQLELLDSQSLFSSPPLNHSQINRMETMPVPMPMPMTMIKPAASGCQDFGMDHSRVRGFNPGFMSTSTSTTSSSGKESDGSVKKKRKLASYFERLMKEVLDKQEDLQNKFLEAMEKCEKDRIARDEAWKMQEIARLKKEQEALAHERAISAAKDAAVIAFLQKVSDQTIQLQLPTDLPHRHTEERESESMKTIGNQENVVMQQDNDKENIDKQEIDSAGENSNSFQTNSSSRWPKAEVEALIKLRTNVDLQYQDNGSSKGPLWEDISCGMKKLGYDRNAKRCKEKWENINKYYRRVKESQKKRPEDSKTCPYFHQLDSIYQNKSKKQLPIMETPGSNMKAGEILMQIINQQQQQQALERTEC*