Gene Details:
- Gene ID: Solyc09g015080
- Gene Symbol: SlTBP
- Gene Name: tocopherol-binding protein
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- SlTBP encodes a chloroplast-targeted protein of the patellin family and is highly expressed in green tissues.
- SlTBP plays a role in maintaining chloroplast structural integrity and affects lipid composition.
- Having demonstrated that SlTBP silencing affected the tocopherol levels and, consequently, impacted on photosynthetic function, lipid peroxidation and plastidial membrane ultrastructure, we next evaluated how tocopherol deficiency affects lipid metabolism.
- The collection of evidence as a whole, rather than any single individual piece, allow us to propose that SlTBP plays a novel function in plants, mediating the role of tocopherol in inter-/intraorganellar communication.
Function-related keywords:
Literature:
- A Tomato Tocopherol-Binding Protein Sheds Light on Intracellular α-Tocopherol Metabolism in Plants. DOI: 10.1093/pcp/pcy191 ; PMID: 30239816
Related News:
Gene Resources:
- NCBI ID: 101267152
- UniProt accessions: Solyc09g015080
Orthologs:
Sequences:
cDNA Sequence
- >Solyc09g015080.3.1
GGCTACACAACAAGTAATAAATTATAGCCCCAAATTGAAACATTTCCACTCACTTCTCTGTTTACTAAGTCCCTTTCTTTCCCCATATCTCTTCTCTTGTCCCTCACTAAGCACACATAAAAAAAATGGATTCTTCATCCCCCATTACTGTTCAAAAAGCTCTAAAATCCCCAGAATCAGCTCCACAATCTTCACCAAAGCCACAATCTTTGAAGAAAAGCTTTGTCACTTCTCTAATGGAAGCAACTACTTTACGCACCCCATCTTTTAAAGAAGACTCTTACTTCACTTCTCACCTTAAACCCTCTGAAAAGAAAGCATTACAAGAATTGAAAGACAAGCTTCAATCTTCTTCTTCTTCTTGTTCCATGTGGGGTATTCCACTTTTAGGTGGAGATGAAAAGGCTGATGTCATTCTCTTGAAATTCCTCAGAGCAAGGGATTTTAAGGTTTCAGATTCACTTCATATGTTAGAAAAGTGTCTTTCTTGGAGAAAAGAGTTTGGTGCTGACACCATTTTGGAAGAAGATTTTTCAGGATTTAAAGAACTTGAAGGAGTTGTTGCTTATATGAATGGTTATGATAGAGATGGACACCCTGTTTGTTACAATGCTTATGGGGTTTTTAAAGATAAAGAAATGTATGAAAAAATCTTTGGGGATGAAGAAAAATTGAAAAAATTCTTGAGATGGAGAGTTCAAGTTCTTGAAAGAGGAATTGAACAACTACATTTCAAGCCTGGTGGAATTAATTCCATTATTCAGGTAACTGATCTCAAAGATATGCCTAAGAGAGAACTAAGGGTTGCTTCAAATCAAATTTTATCTCTTTTTCAAGATAATTACCCTGAAATGGTTGCTCGTAAGATATTTATCAATGTGCCATGGTACTTCAGTGTGTTGTATTCAATGTTTAGTCCATTTCTGACTCAAAGAACCAAGAGCAAGTTTGTGATATCCAAGGAGGGAAATGTTGCTGAGACATTATACAAATTCATAAGGCCTGAGGATATACCTGTTCAGTATGGTGGATTGAGTAGACCTACTGATTTACAAAATGGCCCCCCAAAACCAGCTTCTGAGTTTACTGTCAAAGGAGGAGAGAAAGTCAATATTCAAATTGAAGGCATTGAGGGTGGTGCAACAATAACATGGGATATAGTAGTAGGAGGATGGGACTTGGAGTACAGTGCAGAATTTGTACCAAATGGTGAAGGCAGTTACACAATTGCTGTTGAGAAGCCAAGGAAAATTGCAGCCAATGAAGAGGCAATTCACAATTCATTCACTTCAAAAGAAGCTGGAAAAATGGTGCTTTCTGTAGACAATACTGCCTCTCGAAAGAGAAAAGTTGCAGCCTATCGATACATTGTCCGCAAATCTGCAACTATTTCAGCCTAAAATGAAGCAAATCTATGTTTTTTTTAACTCACTTTATCTAGGAGTACTTGTTTTTACATTTTTGTTGATGAATGTTTGGGCAAGTTAGTAGTAATATTTTATGTGAGCCCTAGTATGATGATATGAATGTATAAATGGTGGTATTATATTGCTTATTAGTACTACTACTAAACTAATATGAAGTGAAAAAGCATGTTAATTAACTTTTTGCTAATATATGGATTACCACTTCCACTTGATTTGTGGAAGTTTTTATAA
CDS Sequence
- >Solyc09g015080.3.1
ATGGATTCTTCATCCCCCATTACTGTTCAAAAAGCTCTAAAATCCCCAGAATCAGCTCCACAATCTTCACCAAAGCCACAATCTTTGAAGAAAAGCTTTGTCACTTCTCTAATGGAAGCAACTACTTTACGCACCCCATCTTTTAAAGAAGACTCTTACTTCACTTCTCACCTTAAACCCTCTGAAAAGAAAGCATTACAAGAATTGAAAGACAAGCTTCAATCTTCTTCTTCTTCTTGTTCCATGTGGGGTATTCCACTTTTAGGTGGAGATGAAAAGGCTGATGTCATTCTCTTGAAATTCCTCAGAGCAAGGGATTTTAAGGTTTCAGATTCACTTCATATGTTAGAAAAGTGTCTTTCTTGGAGAAAAGAGTTTGGTGCTGACACCATTTTGGAAGAAGATTTTTCAGGATTTAAAGAACTTGAAGGAGTTGTTGCTTATATGAATGGTTATGATAGAGATGGACACCCTGTTTGTTACAATGCTTATGGGGTTTTTAAAGATAAAGAAATGTATGAAAAAATCTTTGGGGATGAAGAAAAATTGAAAAAATTCTTGAGATGGAGAGTTCAAGTTCTTGAAAGAGGAATTGAACAACTACATTTCAAGCCTGGTGGAATTAATTCCATTATTCAGGTAACTGATCTCAAAGATATGCCTAAGAGAGAACTAAGGGTTGCTTCAAATCAAATTTTATCTCTTTTTCAAGATAATTACCCTGAAATGGTTGCTCGTAAGATATTTATCAATGTGCCATGGTACTTCAGTGTGTTGTATTCAATGTTTAGTCCATTTCTGACTCAAAGAACCAAGAGCAAGTTTGTGATATCCAAGGAGGGAAATGTTGCTGAGACATTATACAAATTCATAAGGCCTGAGGATATACCTGTTCAGTATGGTGGATTGAGTAGACCTACTGATTTACAAAATGGCCCCCCAAAACCAGCTTCTGAGTTTACTGTCAAAGGAGGAGAGAAAGTCAATATTCAAATTGAAGGCATTGAGGGTGGTGCAACAATAACATGGGATATAGTAGTAGGAGGATGGGACTTGGAGTACAGTGCAGAATTTGTACCAAATGGTGAAGGCAGTTACACAATTGCTGTTGAGAAGCCAAGGAAAATTGCAGCCAATGAAGAGGCAATTCACAATTCATTCACTTCAAAAGAAGCTGGAAAAATGGTGCTTTCTGTAGACAATACTGCCTCTCGAAAGAGAAAAGTTGCAGCCTATCGATACATTGTCCGCAAATCTGCAACTATTTCAGCCTAA
Protein Sequence
- >Solyc09g015080.3.1
MDSSSPITVQKALKSPESAPQSSPKPQSLKKSFVTSLMEATTLRTPSFKEDSYFTSHLKPSEKKALQELKDKLQSSSSSCSMWGIPLLGGDEKADVILLKFLRARDFKVSDSLHMLEKCLSWRKEFGADTILEEDFSGFKELEGVVAYMNGYDRDGHPVCYNAYGVFKDKEMYEKIFGDEEKLKKFLRWRVQVLERGIEQLHFKPGGINSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSVLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFIRPEDIPVQYGGLSRPTDLQNGPPKPASEFTVKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNGEGSYTIAVEKPRKIAANEEAIHNSFTSKEAGKMVLSVDNTASRKRKVAAYRYIVRKSATISA*