Gene Details:
- Gene ID: Solyc08g076390
- Gene Symbol: SlJMJ4
- Gene Name: histone H3K27 demethylase
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- The histone H3K27 demethylase SlJMJ4 promotes dark- and ABA-induced leaf senescence in tomato.
- Overexpression of SlJMJ4 results in a premature senescence phenotype and promotes dark- and ABA-induced leaf senescence in tomato.
- In response to ABA, overexpression of SlJMJ4 increases its binding at the loci of SlORE1, SlNAP2, SlSAG113, SlSAG12, SlABI5, and SlNCED3 and decreases their H3K27me3 levels, thereby activating their expression and mediating ABA-induced leaf senescence in tomato.
- SlJMJ4 affects ABA-induced leaf senescence by reducing H3K27me3 levels of ABA-related genes to regulate their transcription.
Function-related keywords:
- leaf , leaf-senescence , senescence , aba
Literature:
- induced leaf senescence in tomato. DOI: 10.1093/hr/uhab077 ; PMID: 35043207
Related News:
Gene Resources:
- NCBI ID: 101264047
- UniProt accessions: A0A3Q7HTL1
Orthologs:
Sequences:
cDNA Sequence
- >Solyc08g076390.3.1
TTTATTTTCTCTTTTTTCCGTTTTTTCTAAAAGCCAATACTTCTGGATTTCCATTTACTGTTCCCCTTCTTCTTCTCTCTCTTCCCTCTCTCTACTTGCCGGGAAACCTCTTCCCCTCGCCGGCGAACAACTTTTCCGTTTACCGGTGAAAAGAGTCGACGAAAAATTCTAATGCACTCACTCTTCGTATTTCGTTCGGTTTGATTATTGCTTTTACCTTTGGCGTAACTGAGTCACTTGGTTGGTGGAATCGCTCTGATCTCTGAGTTTGACTCGTTTTGTGGAGTTCTAGGGGAATGTGGCGAGCCTAAGGGTGTTTTTCTGGCTCCTTATGCCCTAGATCAGGATCTAGGGCTTGACTGAAGGCTGTATTGTTGTTTTTGGCCTTTTTTTGTATTGTTTTTTCTGTGAAGACGAAGAAGAGTAGGGAAAAGCTTCGTAATGAGATGGTGGAAGGGAGAGTCTGCATGTCGAGGGAGGCTAAATTGGAATTTTTGAAGCGAAAGAGGCTTCAACGAATGAAAACAGAATCTTTGAATGATCTTTCTTGTGTCAGCAATATGCTGAGTAGAAGCGGAGGAGATGCCCTACGATCTTCTGCTTCATGTGGTGTTAGAATCCAGGTTAATACTGATTCATATCCAGGATCTGGGGCTTCTTTTAATGGAAAGGATAATTTCTCAAAGCACAAGGTAGCAAAGTTTGACACTTCCAATCTGGACTGGATCGATAAAATTCCAGAATGTCCAGTATACTGTCCAACTAAAGAGGAGTTTGAGGATCCCTTAGTTTATCTCCAGAAGTTAGCTCCCGAAGCTTCTAAATATGGTATATGCAAGATTGTTGCCCCTATAACTGCTTCTGTTCCTGCTGGAGTTGTTTTGATGAAAGAGAAGGCTGGTTTTAAATTTACTACTAGGGTACAGCCACTTCGGCTAGCCGAATGGGACACGGATGACAAGGTCACCTTTTTCATGAGTGGAAGGAACTATTCATTCAGAGATTTCGAGAAAATGGCGAACAAGGTATTTTCTCGTCGATATTATAGTGCTGGATGCCTTCCTCCTACATACTTGGAAAAAGAATTTTGGCATGAAATAGCTTGTGGAAAGACTGATAGTGTAGAATATGCCTGTGATGTTGATGGTAGTGCGTTCTCATCTTCTCCAAATGATCAGCTCGGAAAAAGCAAATGGAATTTGAAGGAACTTTCTCGGTTGCCTAAATCAGTACTGCGGCTCCTCGAAAAATCAATCCCGGGAGTTACTGAACCTATGTTGTATATTGGAATGCTATTTAGTATGTTTGCTTGGCATGTGGAAGACCACTACTTATATAGTATCAATTATCAGCACTGTGGGGCAGCAAAAACGTGGTACGGTATTCCAGGTCATGCAGCACTTGACTTTGAGAAGGTCGTCCGGGAGCATGTGTACACCAATGATATCTTATCAGCTGATGGAGAGGATGGAGCTTTTGATGTGCTTTTGGGGAAGACAACACTGTTTCCTCCAAATATTTTGTCAGAGCATGGTGTACCTGTGTATAGAGCTGTTCAAAAGCCCGGCGAATTCGTAGTAACTTTTCCTAGAGCGTATCATGCAGGATTTAGTCATGGTTTTAATTGTGGTGAGGCAGTTAACTTTGCAACTGGCGATTGGTTTCCTATGGGTTCAATTTCTAGCCGTCGCTATGCACTTTTGAACAGGGTGCCCTTACTTCCCCATGAGGAACTTCTCTGCAAAGAAGCAATGCTTCTGTGTACGAGTTTGAAACTGGAAGATCCTGACTATTCCTCTTCAGACTTGATCACTCATCGTAGCATCAAAGTTTCTTTTTTGAATTTGATGAGGTTTCAGCATCGTGCTCGTTGGTGCCTCGCAAGGTTAAAAGCATTTTCATGCATATCTTTATTCACACATGGTACCATTCTTTGCAGCATATGCAAGCGTGATTGTTATGTAGCTTACCTTAACTGCAACTGCTATGCACATGCAGTGTGCCTTCGCCATGAACCTAGGTCACTTGATTTTCCTTGCGGCAGCAATAGAACCCTTTGCCTAAGGGAAGATATTTTGGACATGGAAACTGCAGCTAGACAGTTTGAGCAGGATAAGGTAGTTCTGCATGAAGTTCAACAGCAACACAGAAAAACTGATGACTTTTCTAAACTTTTAAAAATGTTTCCACGAGCCGAGGATGATGGTTATGTTCCATATTGTGAAATCAATTTTGAATGGCCAGAGGACTCAGTTGAACAAACAATTTATGAGGAAGCACCAAATGGTTCTGGTCCTGTTGTGTCTGATCTCAACTCTTCAATGGAGCCAAAAGATTATCTTTCAACTGGTGTTAATGTACAGGGAAATGCTAACTGTAACTTAGGGGATAGTTCATCAATGAAGCTCCATGGTGATGTTTTTAGTTGTGGGAGTGAAAGATCGGAGATTTCATCAAGTGCTAGCAGTAAAGTCCATCAGAAAGTAGCTCAAGAGACGGATTGTAGAACTATTATAGATCAAGACAGTGATGAGTCTGATACAGAGGTTTTCAGAGTGAAGAGACGTCCTCGAGCAGAACATAGAAGTGTACATGATTCAATGTCTATCAACGTTGAAAATCAGAGTTTTAAAAGATTAAAGAAACATCAATCAGGACGATTGGGGTCATTGTGTTTGCCAGAGCATTCCTCGACTTGTGATATAAATCATAGGTCCGTTGCTATTTCAAGCCAATCGAAGGAAGCATTGGACTTCCATCCCAGAGACAAGTCAGTGAGAGGTGGTACAGTTCCAGTCTGTATTAAGTTGAAGAAAGGGGTTGGTTATGAACAAGATGAGCACAAGAGAGATGATAGGTTACCGTTTGAATTGGGGCAGAGTAAGAGGAGGGAACCAGGGAGAACAGAGAGTGGGTCGAAGCGTTTGAAAGTCAGAGGTCCTTCAGTTTTAGGGTTTGGAGGTCGGATGGATGGATTGAATAGATAGGTAACTGAAAAAGTAAAGGAGCATCGACTTTGCTAACACACAGATATTCTCTAACAACACGATAAAGAAAGGTAAGCATTAGATTAAAGAAGAGTTCTTTGTGCAGGCCTCTAAAGTTGGGGCAAGTAGCACAGTGGTGATTGTTATTGTTCTTTGTCCAGGGAGGAGAACCTCTCTCCTTGTTATTCCACTGCAGATAGATAGTAGGTGAATTCTCTCATGTACATTTTTATTTTTAACAAGTTGATCCAATTCTTGTGAGGTGCAAATGGGTATTCCCAAATAGCCCTCTGATTTAATGTCAAGCCTGTTGCCTTCTCCCTAGTTTAGGGTTCATTATTCTTTTGTAGCTACATGTCCTTTTTTGGCTTGAAACTACATGAATAAATACATAGCATTTTTTTTCCCCCTTTCACT
CDS Sequence
- >Solyc08g076390.3.1
ATGGTGGAAGGGAGAGTCTGCATGTCGAGGGAGGCTAAATTGGAATTTTTGAAGCGAAAGAGGCTTCAACGAATGAAAACAGAATCTTTGAATGATCTTTCTTGTGTCAGCAATATGCTGAGTAGAAGCGGAGGAGATGCCCTACGATCTTCTGCTTCATGTGGTGTTAGAATCCAGGTTAATACTGATTCATATCCAGGATCTGGGGCTTCTTTTAATGGAAAGGATAATTTCTCAAAGCACAAGGTAGCAAAGTTTGACACTTCCAATCTGGACTGGATCGATAAAATTCCAGAATGTCCAGTATACTGTCCAACTAAAGAGGAGTTTGAGGATCCCTTAGTTTATCTCCAGAAGTTAGCTCCCGAAGCTTCTAAATATGGTATATGCAAGATTGTTGCCCCTATAACTGCTTCTGTTCCTGCTGGAGTTGTTTTGATGAAAGAGAAGGCTGGTTTTAAATTTACTACTAGGGTACAGCCACTTCGGCTAGCCGAATGGGACACGGATGACAAGGTCACCTTTTTCATGAGTGGAAGGAACTATTCATTCAGAGATTTCGAGAAAATGGCGAACAAGGTATTTTCTCGTCGATATTATAGTGCTGGATGCCTTCCTCCTACATACTTGGAAAAAGAATTTTGGCATGAAATAGCTTGTGGAAAGACTGATAGTGTAGAATATGCCTGTGATGTTGATGGTAGTGCGTTCTCATCTTCTCCAAATGATCAGCTCGGAAAAAGCAAATGGAATTTGAAGGAACTTTCTCGGTTGCCTAAATCAGTACTGCGGCTCCTCGAAAAATCAATCCCGGGAGTTACTGAACCTATGTTGTATATTGGAATGCTATTTAGTATGTTTGCTTGGCATGTGGAAGACCACTACTTATATAGTATCAATTATCAGCACTGTGGGGCAGCAAAAACGTGGTACGGTATTCCAGGTCATGCAGCACTTGACTTTGAGAAGGTCGTCCGGGAGCATGTGTACACCAATGATATCTTATCAGCTGATGGAGAGGATGGAGCTTTTGATGTGCTTTTGGGGAAGACAACACTGTTTCCTCCAAATATTTTGTCAGAGCATGGTGTACCTGTGTATAGAGCTGTTCAAAAGCCCGGCGAATTCGTAGTAACTTTTCCTAGAGCGTATCATGCAGGATTTAGTCATGGTTTTAATTGTGGTGAGGCAGTTAACTTTGCAACTGGCGATTGGTTTCCTATGGGTTCAATTTCTAGCCGTCGCTATGCACTTTTGAACAGGGTGCCCTTACTTCCCCATGAGGAACTTCTCTGCAAAGAAGCAATGCTTCTGTGTACGAGTTTGAAACTGGAAGATCCTGACTATTCCTCTTCAGACTTGATCACTCATCGTAGCATCAAAGTTTCTTTTTTGAATTTGATGAGGTTTCAGCATCGTGCTCGTTGGTGCCTCGCAAGGTTAAAAGCATTTTCATGCATATCTTTATTCACACATGGTACCATTCTTTGCAGCATATGCAAGCGTGATTGTTATGTAGCTTACCTTAACTGCAACTGCTATGCACATGCAGTGTGCCTTCGCCATGAACCTAGGTCACTTGATTTTCCTTGCGGCAGCAATAGAACCCTTTGCCTAAGGGAAGATATTTTGGACATGGAAACTGCAGCTAGACAGTTTGAGCAGGATAAGGTAGTTCTGCATGAAGTTCAACAGCAACACAGAAAAACTGATGACTTTTCTAAACTTTTAAAAATGTTTCCACGAGCCGAGGATGATGGTTATGTTCCATATTGTGAAATCAATTTTGAATGGCCAGAGGACTCAGTTGAACAAACAATTTATGAGGAAGCACCAAATGGTTCTGGTCCTGTTGTGTCTGATCTCAACTCTTCAATGGAGCCAAAAGATTATCTTTCAACTGGTGTTAATGTACAGGGAAATGCTAACTGTAACTTAGGGGATAGTTCATCAATGAAGCTCCATGGTGATGTTTTTAGTTGTGGGAGTGAAAGATCGGAGATTTCATCAAGTGCTAGCAGTAAAGTCCATCAGAAAGTAGCTCAAGAGACGGATTGTAGAACTATTATAGATCAAGACAGTGATGAGTCTGATACAGAGGTTTTCAGAGTGAAGAGACGTCCTCGAGCAGAACATAGAAGTGTACATGATTCAATGTCTATCAACGTTGAAAATCAGAGTTTTAAAAGATTAAAGAAACATCAATCAGGACGATTGGGGTCATTGTGTTTGCCAGAGCATTCCTCGACTTGTGATATAAATCATAGGTCCGTTGCTATTTCAAGCCAATCGAAGGAAGCATTGGACTTCCATCCCAGAGACAAGTCAGTGAGAGGTGGTACAGTTCCAGTCTGTATTAAGTTGAAGAAAGGGGTTGGTTATGAACAAGATGAGCACAAGAGAGATGATAGGTTACCGTTTGAATTGGGGCAGAGTAAGAGGAGGGAACCAGGGAGAACAGAGAGTGGGTCGAAGCGTTTGAAAGTCAGAGGTCCTTCAGTTTTAGGGTTTGGAGGTCGGATGGATGGATTGAATAGATAG
Protein Sequence
- >Solyc08g076390.3.1
MVEGRVCMSREAKLEFLKRKRLQRMKTESLNDLSCVSNMLSRSGGDALRSSASCGVRIQVNTDSYPGSGASFNGKDNFSKHKVAKFDTSNLDWIDKIPECPVYCPTKEEFEDPLVYLQKLAPEASKYGICKIVAPITASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTDDKVTFFMSGRNYSFRDFEKMANKVFSRRYYSAGCLPPTYLEKEFWHEIACGKTDSVEYACDVDGSAFSSSPNDQLGKSKWNLKELSRLPKSVLRLLEKSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGAAKTWYGIPGHAALDFEKVVREHVYTNDILSADGEDGAFDVLLGKTTLFPPNILSEHGVPVYRAVQKPGEFVVTFPRAYHAGFSHGFNCGEAVNFATGDWFPMGSISSRRYALLNRVPLLPHEELLCKEAMLLCTSLKLEDPDYSSSDLITHRSIKVSFLNLMRFQHRARWCLARLKAFSCISLFTHGTILCSICKRDCYVAYLNCNCYAHAVCLRHEPRSLDFPCGSNRTLCLREDILDMETAARQFEQDKVVLHEVQQQHRKTDDFSKLLKMFPRAEDDGYVPYCEINFEWPEDSVEQTIYEEAPNGSGPVVSDLNSSMEPKDYLSTGVNVQGNANCNLGDSSSMKLHGDVFSCGSERSEISSSASSKVHQKVAQETDCRTIIDQDSDESDTEVFRVKRRPRAEHRSVHDSMSINVENQSFKRLKKHQSGRLGSLCLPEHSSTCDINHRSVAISSQSKEALDFHPRDKSVRGGTVPVCIKLKKGVGYEQDEHKRDDRLPFELGQSKRREPGRTESGSKRLKVRGPSVLGFGGRMDGLNR*