Information report for SlHB8
Gene Details
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Functional Descriptions
- The SlHB8 acts as a negative regulator in tapetum development and pollen wall formation in Tomato.
- Report the isolation of one HD-Zip III family transcription factor, SlHB8, whose expression levels decreased as pollen development progressed.
- SlHB8 knockout using CRISPR/Cas9 increased pollen activity, subsequently inducing fruit setting, whereas overexpression displayed opposite phenotypes.
- Overexpression lines under control of the 35 s and p2A11 promoters revealed that SlHB8 reduced pollen activity by affecting early pollen development.
- The study findings demonstrate that SlHB8 is involved in tapetum development and degradation and plays an important role in anther development.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 101251205
- UniProt accessions: A0A3Q7HQY2
- AlphaFoldDB: A0A3Q7HQY2
- EnsemblPlants: Solyc08g066500.3.1
- Gramene: Solyc08g066500.3.1
- GO: GO:0003677 , GO:0003700 , GO:0005634 , GO:0008289 , GO:0030154
- OMA: HPQNQGN
- InterPro: IPR001356 , IPR002913 , IPR009057 , IPR013978 , IPR023393 , IPR044830
- PANTHER: PTHR45950 , PTHR45950:SF6
- SUPFAM: SSF46689 , SSF55961
- PROSITE: PS50071 , PS50848
- Gene3D: 1.10.10.60 , 3.30.530.20
- Pfam: PF00046 , PF01852 , PF08670
- CDD: cd00086 , cd08875 , cd14686
- STRING: 4081.A0A3Q7HQY2
Sequences
cDNA Sequence
- >Solyc08g066500.4.1
CTTGAAGTGATGATGGCTGTGACATCAAGCTGTAAAGACAAATTTGGGATGGATAGTGGTAAATATGTGAGGTACACTCCTGAGCAGGTAGAGGCTTTGGAGAGGTTGTATCATGAATGTCCAAAGCCTAGTTCACTCCGTCGCCAGCAGTTGATTCGGGAGTGTCCAATTCTGTCGAATATCGAGCCAAAACAGATCAAAGTTTGGTTCCAGAACAGAAGATGTAGAGAGAAGCAACGTAAAGAATCATCGCGCCTTCAAGGCGTGAACAGAAAATTGACTGCAATGAATAAGCTGTTGATGGAAGAGAACGATAGGTTGCAGAAGCAAGTTTCACAGTTGGTGTATGAGAATAGCTTTTTCCGCCAACAGACTCAAACTGCAGCCTTAGCCACCACAGACAACAATAGTTGTGAATCTGTGGTGACGAGTGGTCAACACAACTTGACCCCTCAGCGTCCACCAAGGGATGCAAGCCCTGCGGGACTTTTGTCCTTAGCAGAGGAAACTTTAACAGAGTTTTTATCAAAGGCAACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCAATTTCTCATGGTTGCTCAGGAGTAGCCTCGCGTGCTTGTGGCCTTGTGGGTCTAGAGCCTACAAGAGTTGCTGAAATTCTTAAAGATCGGCCATCATGGTTTCGTGACTGCCGAGCAGTGGATGTTCTCAATGTGATGTCCACTGGAAACGGTGGAACCATTGAATTGCTATACATGCAGCTCTATGCACCTACTACACTGGCACCAGCTCGTGACTTTTGGTTAATGCGGTATACATCTGTTATGGAAGATGGTAGCCTTGTGATATGTGAAAGATCCCTGAACAACACTCAGAATGGTCCTAGTATGCCACCGGTGCAGAGTTTTGTGAGAGCAGATATACTGCCGAGTGGATATCTGATACGACCCTGTGAAGGAGGTGGTTCAATCATTCACATAGTTGACCATATGGATTTAGAGCCATGGAGTGTGCCTGAAGTGTTGCGTCCACTGTATGAGTCATCAACATTGTTGTCGCAGAGGACAACTATGGCGGCATTACGTCACTTGAGACAAATTTCTCAAGAAATTTCACATCCTACTGTCTCTGGCTGGGGAAGAAGACCTGCTGCGTTGCGCGCACTTGGTCAAAGATTGAGCAAGGGTTTTAACGAGGCCGTTAACGGTTTTACTGATGAGGGATGGTCTATGCTTGAAAGTGATGGCGTAGATGATGTTACTATTCTTGTGAACTCATCACCCAGCAAATTGATGGGTGCAAACATCTCTTATGCCAATGGATTTCCATCGATGAGCAGCGCTGTGCTTTGTGCCAAGGCTTCTATGCTTTTACAGAACGTACCTCCACCCATTCTGCTAAGGTTCTTGCGGGAACACCGATCAGAATGGGCAGACAGTGGTATCGATGCTTATTCAGCTGCTGCAGTTAAAGCTGGTCCATGCAGCATACCAGTCACCCGAACTGGAAGTTTTGGTGGACAAATTATTCTTCCACTGGCTCACACAATTGAACATGAAGAGTTTATGGAGGTGATAAGACTTGAAAGCATTGGCCACTATCAAGATGACATGATAATGCCTAGTGACATCTTCCTTCTGCAACTTTGTAATGGAGTGGACGAGAATGCTATTGGAACATGTGCAGAGCTCATGTTTGCTCCTATTGATGCCTCATTTGCTGATGATGCTCCTCTCCTTCCCTCTGGTTTTCGTATCATTCCTCTGGATTCCAAGGCGGATGCATCTAGTCCAAACCGCACACTTGATCTTGCATCAACTCTTGAGGTTGGACCAGCTGGAAGTCGACCAACTGGGGATCATTCCAAGAATTCTGGTAGCGCAAAATCGGTTATGACAATAGCATTTCAATTTGCATTTGAGATTCATCTTCAAGAAAGCATAGCTGCTATGGCACGTCAATATGTCCGCAGTATCATATCATCTGTTCAGAGGGTTGCTTTGGCTCTCTCTCCATCTCGTATTGGTTCTCTCCCTGGTCTAAGATCTCCACCTGGCACACCTGAAGCCCAGACTCTTGCCCGTTGGATTTGCCAAAGTTATAGATTCTTCTTAGGCGTGGAGCTGCTCAAATCTGCTAGCGGAGGAAGTGAATCCATCCTGAAAGAAATTTGGGATCACTCAGATGCTCTGATGTGTTGCTCTATGAAGGCACTGCCAGTTTTCACATTCGCGAATGAGGCTGGACTTGACATGCTAGAAACCACCTTAGTAGCCCTTCAAGATATTAGTCTGGAAAAGATTTTCGATGACAATGGAAGAAAGGCTCTCTACTCTGAGCTTCCACAGATAATGCAGCAGGGTTTTGCATGTCTTCAAGGTGGTATCTGTTTGTCAAGTATGGGAAGGCCAATATCCTATGAGAGAGCAGTAGCTTGGAAAGTATTGAATGAAGAAGAAGATGCCCATTGTATATGTTTTATGTTTATCAATTGGTCTTTTGTCTGATATTATTTTGCACATCAATGTAGGAACTCATTAATGCAAACTTAGATCAACAACACTTCTTTTCTTTTTGAATCATACTTCATGGATCAACCTCCTTCCATTTTTTTACTTTCTTTTAATTATCTTTGGTTTTTAACTTACTCTTACTAGAAGCAATCTCACATTACATTTAGCTCACACATTCAGTGGGT
CDS Sequence
- >Solyc08g066500.4.1
CTTGAAGTGATGATGGCTGTGACATCAAGCTGTAAAGACAAATTTGGGATGGATAGTGGTAAATATGTGAGGTACACTCCTGAGCAGGTAGAGGCTTTGGAGAGGTTGTATCATGAATGTCCAAAGCCTAGTTCACTCCGTCGCCAGCAGTTGATTCGGGAGTGTCCAATTCTGTCGAATATCGAGCCAAAACAGATCAAAGTTTGGTTCCAGAACAGAAGATGTAGAGAGAAGCAACGTAAAGAATCATCGCGCCTTCAAGGCGTGAACAGAAAATTGACTGCAATGAATAAGCTGTTGATGGAAGAGAACGATAGGTTGCAGAAGCAAGTTTCACAGTTGGTGTATGAGAATAGCTTTTTCCGCCAACAGACTCAAACTGCAGCCTTAGCCACCACAGACAACAATAGTTGTGAATCTGTGGTGACGAGTGGTCAACACAACTTGACCCCTCAGCGTCCACCAAGGGATGCAAGCCCTGCGGGACTTTTGTCCTTAGCAGAGGAAACTTTAACAGAGTTTTTATCAAAGGCAACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCAATTTCTCATGGTTGCTCAGGAGTAGCCTCGCGTGCTTGTGGCCTTGTGGGTCTAGAGCCTACAAGAGTTGCTGAAATTCTTAAAGATCGGCCATCATGGTTTCGTGACTGCCGAGCAGTGGATGTTCTCAATGTGATGTCCACTGGAAACGGTGGAACCATTGAATTGCTATACATGCAGCTCTATGCACCTACTACACTGGCACCAGCTCGTGACTTTTGGTTAATGCGGTATACATCTGTTATGGAAGATGGTAGCCTTGTGATATGTGAAAGATCCCTGAACAACACTCAGAATGGTCCTAGTATGCCACCGGTGCAGAGTTTTGTGAGAGCAGATATACTGCCGAGTGGATATCTGATACGACCCTGTGAAGGAGGTGGTTCAATCATTCACATAGTTGACCATATGGATTTAGAGCCATGGAGTGTGCCTGAAGTGTTGCGTCCACTGTATGAGTCATCAACATTGTTGTCGCAGAGGACAACTATGGCGGCATTACGTCACTTGAGACAAATTTCTCAAGAAATTTCACATCCTACTGTCTCTGGCTGGGGAAGAAGACCTGCTGCGTTGCGCGCACTTGGTCAAAGATTGAGCAAGGGTTTTAACGAGGCCGTTAACGGTTTTACTGATGAGGGATGGTCTATGCTTGAAAGTGATGGCGTAGATGATGTTACTATTCTTGTGAACTCATCACCCAGCAAATTGATGGGTGCAAACATCTCTTATGCCAATGGATTTCCATCGATGAGCAGCGCTGTGCTTTGTGCCAAGGCTTCTATGCTTTTACAGAACGTACCTCCACCCATTCTGCTAAGGTTCTTGCGGGAACACCGATCAGAATGGGCAGACAGTGGTATCGATGCTTATTCAGCTGCTGCAGTTAAAGCTGGTCCATGCAGCATACCAGTCACCCGAACTGGAAGTTTTGGTGGACAAATTATTCTTCCACTGGCTCACACAATTGAACATGAAGAGTTTATGGAGGTGATAAGACTTGAAAGCATTGGCCACTATCAAGATGACATGATAATGCCTAGTGACATCTTCCTTCTGCAACTTTGTAATGGAGTGGACGAGAATGCTATTGGAACATGTGCAGAGCTCATGTTTGCTCCTATTGATGCCTCATTTGCTGATGATGCTCCTCTCCTTCCCTCTGGTTTTCGTATCATTCCTCTGGATTCCAAGGCGGATGCATCTAGTCCAAACCGCACACTTGATCTTGCATCAACTCTTGAGGTTGGACCAGCTGGAAGTCGACCAACTGGGGATCATTCCAAGAATTCTGGTAGCGCAAAATCGGTTATGACAATAGCATTTCAATTTGCATTTGAGATTCATCTTCAAGAAAGCATAGCTGCTATGGCACGTCAATATGTCCGCAGTATCATATCATCTGTTCAGAGGGTTGCTTTGGCTCTCTCTCCATCTCGTATTGGTTCTCTCCCTGGTCTAAGATCTCCACCTGGCACACCTGAAGCCCAGACTCTTGCCCGTTGGATTTGCCAAAGTTATAGATTCTTCTTAGGCGTGGAGCTGCTCAAATCTGCTAGCGGAGGAAGTGAATCCATCCTGAAAGAAATTTGGGATCACTCAGATGCTCTGATGTGTTGCTCTATGAAGGCACTGCCAGTTTTCACATTCGCGAATGAGGCTGGACTTGACATGCTAGAAACCACCTTAGTAGCCCTTCAAGATATTAGTCTGGAAAAGATTTTCGATGACAATGGAAGAAAGGCTCTCTACTCTGAGCTTCCACAGATAATGCAGCAGGGTTTTGCATGTCTTCAAGGTGGTATCTGTTTGTCAAGTATGGGAAGGCCAATATCCTATGAGAGAGCAGTAGCTTGGAAAGTATTGAATGAAGAAGAAGATGCCCATTGTATATGTTTTATGTTTATCAATTGGTCTTTTGTCTGA
Protein Sequence
- >Solyc08g066500.4.1
LEVMMAVTSSCKDKFGMDSGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQGVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQTAALATTDNNSCESVVTSGQHNLTPQRPPRDASPAGLLSLAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCSGVASRACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVMSTGNGGTIELLYMQLYAPTTLAPARDFWLMRYTSVMEDGSLVICERSLNNTQNGPSMPPVQSFVRADILPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLSQRTTMAALRHLRQISQEISHPTVSGWGRRPAALRALGQRLSKGFNEAVNGFTDEGWSMLESDGVDDVTILVNSSPSKLMGANISYANGFPSMSSAVLCAKASMLLQNVPPPILLRFLREHRSEWADSGIDAYSAAAVKAGPCSIPVTRTGSFGGQIILPLAHTIEHEEFMEVIRLESIGHYQDDMIMPSDIFLLQLCNGVDENAIGTCAELMFAPIDASFADDAPLLPSGFRIIPLDSKADASSPNRTLDLASTLEVGPAGSRPTGDHSKNSGSAKSVMTIAFQFAFEIHLQESIAAMARQYVRSIISSVQRVALALSPSRIGSLPGLRSPPGTPEAQTLARWICQSYRFFLGVELLKSASGGSESILKEIWDHSDALMCCSMKALPVFTFANEAGLDMLETTLVALQDISLEKIFDDNGRKALYSELPQIMQQGFACLQGGICLSSMGRPISYERAVAWKVLNEEEDAHCICFMFINWSFV*