Gene Details:
- Gene ID: Solyc08g066500
- Gene Symbol: SlHB8
- Gene Name: HD-Zip III family transcription factor 8
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- The SlHB8 acts as a negative regulator in tapetum development and pollen wall formation in Tomato.
- Report the isolation of one HD-Zip III family transcription factor, SlHB8, whose expression levels decreased as pollen development progressed.
- SlHB8 knockout using CRISPR/Cas9 increased pollen activity, subsequently inducing fruit setting, whereas overexpression displayed opposite phenotypes.
- Overexpression lines under control of the 35 s and p2A11 promoters revealed that SlHB8 reduced pollen activity by affecting early pollen development.
- The study findings demonstrate that SlHB8 is involved in tapetum development and degradation and plays an important role in anther development.
Function-related keywords:
- transcription-factor , development , pollen , anther , tapetum , pollen-development , pollen-wall , anther-development , transcription-regulator , pollen-formation , tapetum-degradation
Literature:
- The SlHB8 acts as a negative regulator in tapetum development and pollen wall formation in Tomato. DOI: 10.1093/hr/uhac185 ; PMID: 36338846
Related News:
Gene Resources:
- NCBI ID: 101251205
- UniProt accessions: A0A3Q7HQY2
Orthologs:
Sequences:
cDNA Sequence
- >Solyc08g066500.4.1
CTTGAAGTGATGATGGCTGTGACATCAAGCTGTAAAGACAAATTTGGGATGGATAGTGGTAAATATGTGAGGTACACTCCTGAGCAGGTAGAGGCTTTGGAGAGGTTGTATCATGAATGTCCAAAGCCTAGTTCACTCCGTCGCCAGCAGTTGATTCGGGAGTGTCCAATTCTGTCGAATATCGAGCCAAAACAGATCAAAGTTTGGTTCCAGAACAGAAGATGTAGAGAGAAGCAACGTAAAGAATCATCGCGCCTTCAAGGCGTGAACAGAAAATTGACTGCAATGAATAAGCTGTTGATGGAAGAGAACGATAGGTTGCAGAAGCAAGTTTCACAGTTGGTGTATGAGAATAGCTTTTTCCGCCAACAGACTCAAACTGCAGCCTTAGCCACCACAGACAACAATAGTTGTGAATCTGTGGTGACGAGTGGTCAACACAACTTGACCCCTCAGCGTCCACCAAGGGATGCAAGCCCTGCGGGACTTTTGTCCTTAGCAGAGGAAACTTTAACAGAGTTTTTATCAAAGGCAACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCAATTTCTCATGGTTGCTCAGGAGTAGCCTCGCGTGCTTGTGGCCTTGTGGGTCTAGAGCCTACAAGAGTTGCTGAAATTCTTAAAGATCGGCCATCATGGTTTCGTGACTGCCGAGCAGTGGATGTTCTCAATGTGATGTCCACTGGAAACGGTGGAACCATTGAATTGCTATACATGCAGCTCTATGCACCTACTACACTGGCACCAGCTCGTGACTTTTGGTTAATGCGGTATACATCTGTTATGGAAGATGGTAGCCTTGTGATATGTGAAAGATCCCTGAACAACACTCAGAATGGTCCTAGTATGCCACCGGTGCAGAGTTTTGTGAGAGCAGATATACTGCCGAGTGGATATCTGATACGACCCTGTGAAGGAGGTGGTTCAATCATTCACATAGTTGACCATATGGATTTAGAGCCATGGAGTGTGCCTGAAGTGTTGCGTCCACTGTATGAGTCATCAACATTGTTGTCGCAGAGGACAACTATGGCGGCATTACGTCACTTGAGACAAATTTCTCAAGAAATTTCACATCCTACTGTCTCTGGCTGGGGAAGAAGACCTGCTGCGTTGCGCGCACTTGGTCAAAGATTGAGCAAGGGTTTTAACGAGGCCGTTAACGGTTTTACTGATGAGGGATGGTCTATGCTTGAAAGTGATGGCGTAGATGATGTTACTATTCTTGTGAACTCATCACCCAGCAAATTGATGGGTGCAAACATCTCTTATGCCAATGGATTTCCATCGATGAGCAGCGCTGTGCTTTGTGCCAAGGCTTCTATGCTTTTACAGAACGTACCTCCACCCATTCTGCTAAGGTTCTTGCGGGAACACCGATCAGAATGGGCAGACAGTGGTATCGATGCTTATTCAGCTGCTGCAGTTAAAGCTGGTCCATGCAGCATACCAGTCACCCGAACTGGAAGTTTTGGTGGACAAATTATTCTTCCACTGGCTCACACAATTGAACATGAAGAGTTTATGGAGGTGATAAGACTTGAAAGCATTGGCCACTATCAAGATGACATGATAATGCCTAGTGACATCTTCCTTCTGCAACTTTGTAATGGAGTGGACGAGAATGCTATTGGAACATGTGCAGAGCTCATGTTTGCTCCTATTGATGCCTCATTTGCTGATGATGCTCCTCTCCTTCCCTCTGGTTTTCGTATCATTCCTCTGGATTCCAAGGCGGATGCATCTAGTCCAAACCGCACACTTGATCTTGCATCAACTCTTGAGGTTGGACCAGCTGGAAGTCGACCAACTGGGGATCATTCCAAGAATTCTGGTAGCGCAAAATCGGTTATGACAATAGCATTTCAATTTGCATTTGAGATTCATCTTCAAGAAAGCATAGCTGCTATGGCACGTCAATATGTCCGCAGTATCATATCATCTGTTCAGAGGGTTGCTTTGGCTCTCTCTCCATCTCGTATTGGTTCTCTCCCTGGTCTAAGATCTCCACCTGGCACACCTGAAGCCCAGACTCTTGCCCGTTGGATTTGCCAAAGTTATAGATTCTTCTTAGGCGTGGAGCTGCTCAAATCTGCTAGCGGAGGAAGTGAATCCATCCTGAAAGAAATTTGGGATCACTCAGATGCTCTGATGTGTTGCTCTATGAAGGCACTGCCAGTTTTCACATTCGCGAATGAGGCTGGACTTGACATGCTAGAAACCACCTTAGTAGCCCTTCAAGATATTAGTCTGGAAAAGATTTTCGATGACAATGGAAGAAAGGCTCTCTACTCTGAGCTTCCACAGATAATGCAGCAGGGTTTTGCATGTCTTCAAGGTGGTATCTGTTTGTCAAGTATGGGAAGGCCAATATCCTATGAGAGAGCAGTAGCTTGGAAAGTATTGAATGAAGAAGAAGATGCCCATTGTATATGTTTTATGTTTATCAATTGGTCTTTTGTCTGATATTATTTTGCACATCAATGTAGGAACTCATTAATGCAAACTTAGATCAACAACACTTCTTTTCTTTTTGAATCATACTTCATGGATCAACCTCCTTCCATTTTTTTACTTTCTTTTAATTATCTTTGGTTTTTAACTTACTCTTACTAGAAGCAATCTCACATTACATTTAGCTCACACATTCAGTGGGT
CDS Sequence
- >Solyc08g066500.4.1
CTTGAAGTGATGATGGCTGTGACATCAAGCTGTAAAGACAAATTTGGGATGGATAGTGGTAAATATGTGAGGTACACTCCTGAGCAGGTAGAGGCTTTGGAGAGGTTGTATCATGAATGTCCAAAGCCTAGTTCACTCCGTCGCCAGCAGTTGATTCGGGAGTGTCCAATTCTGTCGAATATCGAGCCAAAACAGATCAAAGTTTGGTTCCAGAACAGAAGATGTAGAGAGAAGCAACGTAAAGAATCATCGCGCCTTCAAGGCGTGAACAGAAAATTGACTGCAATGAATAAGCTGTTGATGGAAGAGAACGATAGGTTGCAGAAGCAAGTTTCACAGTTGGTGTATGAGAATAGCTTTTTCCGCCAACAGACTCAAACTGCAGCCTTAGCCACCACAGACAACAATAGTTGTGAATCTGTGGTGACGAGTGGTCAACACAACTTGACCCCTCAGCGTCCACCAAGGGATGCAAGCCCTGCGGGACTTTTGTCCTTAGCAGAGGAAACTTTAACAGAGTTTTTATCAAAGGCAACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCAATTTCTCATGGTTGCTCAGGAGTAGCCTCGCGTGCTTGTGGCCTTGTGGGTCTAGAGCCTACAAGAGTTGCTGAAATTCTTAAAGATCGGCCATCATGGTTTCGTGACTGCCGAGCAGTGGATGTTCTCAATGTGATGTCCACTGGAAACGGTGGAACCATTGAATTGCTATACATGCAGCTCTATGCACCTACTACACTGGCACCAGCTCGTGACTTTTGGTTAATGCGGTATACATCTGTTATGGAAGATGGTAGCCTTGTGATATGTGAAAGATCCCTGAACAACACTCAGAATGGTCCTAGTATGCCACCGGTGCAGAGTTTTGTGAGAGCAGATATACTGCCGAGTGGATATCTGATACGACCCTGTGAAGGAGGTGGTTCAATCATTCACATAGTTGACCATATGGATTTAGAGCCATGGAGTGTGCCTGAAGTGTTGCGTCCACTGTATGAGTCATCAACATTGTTGTCGCAGAGGACAACTATGGCGGCATTACGTCACTTGAGACAAATTTCTCAAGAAATTTCACATCCTACTGTCTCTGGCTGGGGAAGAAGACCTGCTGCGTTGCGCGCACTTGGTCAAAGATTGAGCAAGGGTTTTAACGAGGCCGTTAACGGTTTTACTGATGAGGGATGGTCTATGCTTGAAAGTGATGGCGTAGATGATGTTACTATTCTTGTGAACTCATCACCCAGCAAATTGATGGGTGCAAACATCTCTTATGCCAATGGATTTCCATCGATGAGCAGCGCTGTGCTTTGTGCCAAGGCTTCTATGCTTTTACAGAACGTACCTCCACCCATTCTGCTAAGGTTCTTGCGGGAACACCGATCAGAATGGGCAGACAGTGGTATCGATGCTTATTCAGCTGCTGCAGTTAAAGCTGGTCCATGCAGCATACCAGTCACCCGAACTGGAAGTTTTGGTGGACAAATTATTCTTCCACTGGCTCACACAATTGAACATGAAGAGTTTATGGAGGTGATAAGACTTGAAAGCATTGGCCACTATCAAGATGACATGATAATGCCTAGTGACATCTTCCTTCTGCAACTTTGTAATGGAGTGGACGAGAATGCTATTGGAACATGTGCAGAGCTCATGTTTGCTCCTATTGATGCCTCATTTGCTGATGATGCTCCTCTCCTTCCCTCTGGTTTTCGTATCATTCCTCTGGATTCCAAGGCGGATGCATCTAGTCCAAACCGCACACTTGATCTTGCATCAACTCTTGAGGTTGGACCAGCTGGAAGTCGACCAACTGGGGATCATTCCAAGAATTCTGGTAGCGCAAAATCGGTTATGACAATAGCATTTCAATTTGCATTTGAGATTCATCTTCAAGAAAGCATAGCTGCTATGGCACGTCAATATGTCCGCAGTATCATATCATCTGTTCAGAGGGTTGCTTTGGCTCTCTCTCCATCTCGTATTGGTTCTCTCCCTGGTCTAAGATCTCCACCTGGCACACCTGAAGCCCAGACTCTTGCCCGTTGGATTTGCCAAAGTTATAGATTCTTCTTAGGCGTGGAGCTGCTCAAATCTGCTAGCGGAGGAAGTGAATCCATCCTGAAAGAAATTTGGGATCACTCAGATGCTCTGATGTGTTGCTCTATGAAGGCACTGCCAGTTTTCACATTCGCGAATGAGGCTGGACTTGACATGCTAGAAACCACCTTAGTAGCCCTTCAAGATATTAGTCTGGAAAAGATTTTCGATGACAATGGAAGAAAGGCTCTCTACTCTGAGCTTCCACAGATAATGCAGCAGGGTTTTGCATGTCTTCAAGGTGGTATCTGTTTGTCAAGTATGGGAAGGCCAATATCCTATGAGAGAGCAGTAGCTTGGAAAGTATTGAATGAAGAAGAAGATGCCCATTGTATATGTTTTATGTTTATCAATTGGTCTTTTGTCTGA
Protein Sequence
- >Solyc08g066500.4.1
LEVMMAVTSSCKDKFGMDSGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQGVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQTAALATTDNNSCESVVTSGQHNLTPQRPPRDASPAGLLSLAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCSGVASRACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVMSTGNGGTIELLYMQLYAPTTLAPARDFWLMRYTSVMEDGSLVICERSLNNTQNGPSMPPVQSFVRADILPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLSQRTTMAALRHLRQISQEISHPTVSGWGRRPAALRALGQRLSKGFNEAVNGFTDEGWSMLESDGVDDVTILVNSSPSKLMGANISYANGFPSMSSAVLCAKASMLLQNVPPPILLRFLREHRSEWADSGIDAYSAAAVKAGPCSIPVTRTGSFGGQIILPLAHTIEHEEFMEVIRLESIGHYQDDMIMPSDIFLLQLCNGVDENAIGTCAELMFAPIDASFADDAPLLPSGFRIIPLDSKADASSPNRTLDLASTLEVGPAGSRPTGDHSKNSGSAKSVMTIAFQFAFEIHLQESIAAMARQYVRSIISSVQRVALALSPSRIGSLPGLRSPPGTPEAQTLARWICQSYRFFLGVELLKSASGGSESILKEIWDHSDALMCCSMKALPVFTFANEAGLDMLETTLVALQDISLEKIFDDNGRKALYSELPQIMQQGFACLQGGICLSSMGRPISYERAVAWKVLNEEEDAHCICFMFINWSFV*