Information report for SlJMJ3
Gene Details
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Functional Descriptions
- Histone H3K27 demethylase SlJMJ3 modulates fruit ripening in tomato.
- Identified SlJMJ3, a member of the KDM4/JHDM3 family, as an H3K27me3 demethylase in tomato (Solanum lycopersicum) that plays an important role in fruit ripening regulation.
- Overexpression of SlJMJ3 leads to accelerated fruit ripening, whereas loss of function of SlJMJ3 delays this process.
- Determined that SlJMJ3 exerts its regulatory function by modulating the expression of multiple ripening-related genes involved in ethylene biosynthesis and response, carotenoid metabolism, cell wall modification, transcriptional control, and DNA methylation modification.
- SlJMJ3 acts as an epigenetic regulator that orchestrates the complex molecular processes underlying fruit ripening.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 101268889
- UniProt accessions: A0A3Q7HJ33
- AlphaFoldDB: A0A3Q7HJ33
- EnsemblPlants: Solyc08g005240.2.1
- Gramene: Solyc08g005240.2.1
- GO: GO:0000785 , GO:0005634 , GO:0006338 , GO:0010468 , GO:0016020 , GO:0032452
- OMA: MEREFWR
- InterPro: IPR003347 , IPR003349 , IPR004198
- PANTHER: PTHR10694 , PTHR10694:SF92
- SUPFAM: SSF51197
- PROSITE: PS51183 , PS51184
- Gene3D: 2.60.120.650
- Pfam: PF02373 , PF02375 , PF02928
- STRING: 4081.A0A3Q7HJ33
Sequences
cDNA Sequence
- >Solyc08g005240.3.1
ATGAGTAGAAGTGGAGGAGATGCCCTAAGATCTACAGCTTCCTGTGGTGTAAGAATTCGTGTTAATGCTGATATGCATTCAGGGTCGGGGACTTCTTTAAATGAAAGAAATGTTTTCCCAAAGCACAAGGTTGCGAAGTTTGATACGTCTGATCTTGAATGGACTGATAAAATTCCAGAATGTCCAGTGTATTATCCAAGTAAAGAGGAGTTTGAGGATCCTATAGTTTATCTCCAGAAGATAACTCCCGAAGCTTCTAAATATGGAATATGCAAGATTGTTTCCCCAATCATGGCTTCTGTTCCTGCTGGAGTAGTTTTGATGAAAGAGAAGGTTGGCTTTAAATTTACAACAAGGGTACAGCCACTTCGTCTAGCTGAGTGGGATAGAGATGACAGGGTTACTTTTTTCATGAGCGGGAGAAACTACACATTTCGTGATTTCGAGAAAATGGCAAACAAGGTTTATGCTCGTAGGTATTGTAGTGCTGGATGTCTTCCTCCTACATATATGGAAAAAGAATTTTGGCATGAAATAGCTTCCGGAAAGACTGAGAGTGTTGAATATGCATGCGATGTCGATGGTAGTGCATTTTCATCTTCTCCCAATGATGAACTTGGAAAATGCAAATGGAATATGAAGAGATTTTCTTGCCTACCTAAATCAGTACTTCGACTACTCGAAAAAGCAATCCCGGGAGTTACAGAACCGATGTTGTACATTGGAATGCTATTTAGTATGTTTGCCTGGCATGTTGAAGATCACTACTTGTACAGCATCAATTATCATCACTGCGGCGCAGCAAAAACCTGGTACGGTATTCCAGGTCATGCAGCACTCGACTTTGAAAAGGTTGTCCGAGAGAATGTCTATAACAATGATATCTTAACCGCCGATGGAGAGGATGGAGCCTTTGATGTGCTTTTGCAGAAGACAACATTTTTTCCTCCTAACATTTTATCAGAACATGATGTTCCTGTCTATAAAGCTGTTCAAAAGCCTGGTGAATTTATAGTAACTTTTCCAAGAGCATATCATGCCGGATTCAGCCATGGTTTTAACTGTGGTGAGGCTGTAAACTTTGCAACTGGTGATTGGTTTCCAATCGGTTCAATTGCTAGCCGCCGTTATGCACTCCTGAACAGGGTGCCTCTTCTTCCCAATGAGGAACTTCTCTGCAAAGAAGCAATGCTTTTACTTACGGATTTGGAACTTGAATATTCAGCTATTTCATCTGCAGACTTGATCACCCACCATACCATCAAAGTTTCTTTTATAAATTTAATGCGGTTTCACCATCGTGCTCGCTGGTGCTTCCTGAAATTAAAAGCATTTTCTGGTATATCGTCATTTTCACACAGCACTATCCTCTGCAGCATATGCAAGCGTGACAGTTATGTAGCATATCTGAACTGCAGCTGCTATTCACATGCAGCATGCCTTCGCCATGATCCTAGGTCACTTCATTTTCCTTGTGGCAGCAGTAGAACCCTTTGCTTAAGGGAAGATATTTTGGACATTGAAACTACAGCTAGAAAGTTTGAGCTAGATGACAATGTTTTGCATGATGTTGCGCATTATCAAGAAGGTGATGACTTGGCTCTCCTCTTGAACATGTTTCCGCAAGCTGAAGAGGAAGGATATGTTCCATATTGTGAAATAAATTTTGAATGGACAGTAAAAGCTGAGGACCGGGTAGAACAAACATTTGATGAGCAAGCTTCCAATGCTCCTGCCTCTAGTATTGAACTCGTGCCCAATACTGGTTCGACAATGGAGCGGAATGACTGCCTCCCCACTAGTATTAATGTACAGGAAAATGCTTATAACTCTCAAGAAGGAAACAATATATCTGTGAAGCCTTTAAGAGACATTTCTAGGTGTAGAAGTGAAAGATTAGCTTGCTCACCTAGTGCTGACTATTTAAAAGTACATGAAAAAATAGCTCATGTTTCAGATGTTAGAACTGTTATTGACCAAGATGATGATGAGTCCGATTCAGAAATTTTCAGAGTGAAGCGACGTTTTAGAGCAGAAAATGGAAGTAGACGTGATTCAACATCAGTTAACATTGAGCACCAGGTATGTGGATACTGGGGTCTAAGTTTGGGTGCAATCTTTTGCTCTTTTTGGGTTTTCAAATTAAAGTTTCTAGTTAAACAGTTCTATGACAAGGGGAAAAGGTGTTGGTTTCTATTTGGCTTTTCAATGTGTATCTTCTGCATTCATTCATGTTCTCCCTTTCGTGTTTTGCATAAATTAGCCTTGTAA
CDS Sequence
- >Solyc08g005240.3.1
ATGAGTAGAAGTGGAGGAGATGCCCTAAGATCTACAGCTTCCTGTGGTGTAAGAATTCGTGTTAATGCTGATATGCATTCAGGGTCGGGGACTTCTTTAAATGAAAGAAATGTTTTCCCAAAGCACAAGGTTGCGAAGTTTGATACGTCTGATCTTGAATGGACTGATAAAATTCCAGAATGTCCAGTGTATTATCCAAGTAAAGAGGAGTTTGAGGATCCTATAGTTTATCTCCAGAAGATAACTCCCGAAGCTTCTAAATATGGAATATGCAAGATTGTTTCCCCAATCATGGCTTCTGTTCCTGCTGGAGTAGTTTTGATGAAAGAGAAGGTTGGCTTTAAATTTACAACAAGGGTACAGCCACTTCGTCTAGCTGAGTGGGATAGAGATGACAGGGTTACTTTTTTCATGAGCGGGAGAAACTACACATTTCGTGATTTCGAGAAAATGGCAAACAAGGTTTATGCTCGTAGGTATTGTAGTGCTGGATGTCTTCCTCCTACATATATGGAAAAAGAATTTTGGCATGAAATAGCTTCCGGAAAGACTGAGAGTGTTGAATATGCATGCGATGTCGATGGTAGTGCATTTTCATCTTCTCCCAATGATGAACTTGGAAAATGCAAATGGAATATGAAGAGATTTTCTTGCCTACCTAAATCAGTACTTCGACTACTCGAAAAAGCAATCCCGGGAGTTACAGAACCGATGTTGTACATTGGAATGCTATTTAGTATGTTTGCCTGGCATGTTGAAGATCACTACTTGTACAGCATCAATTATCATCACTGCGGCGCAGCAAAAACCTGGTACGGTATTCCAGGTCATGCAGCACTCGACTTTGAAAAGGTTGTCCGAGAGAATGTCTATAACAATGATATCTTAACCGCCGATGGAGAGGATGGAGCCTTTGATGTGCTTTTGCAGAAGACAACATTTTTTCCTCCTAACATTTTATCAGAACATGATGTTCCTGTCTATAAAGCTGTTCAAAAGCCTGGTGAATTTATAGTAACTTTTCCAAGAGCATATCATGCCGGATTCAGCCATGGTTTTAACTGTGGTGAGGCTGTAAACTTTGCAACTGGTGATTGGTTTCCAATCGGTTCAATTGCTAGCCGCCGTTATGCACTCCTGAACAGGGTGCCTCTTCTTCCCAATGAGGAACTTCTCTGCAAAGAAGCAATGCTTTTACTTACGGATTTGGAACTTGAATATTCAGCTATTTCATCTGCAGACTTGATCACCCACCATACCATCAAAGTTTCTTTTATAAATTTAATGCGGTTTCACCATCGTGCTCGCTGGTGCTTCCTGAAATTAAAAGCATTTTCTGGTATATCGTCATTTTCACACAGCACTATCCTCTGCAGCATATGCAAGCGTGACAGTTATGTAGCATATCTGAACTGCAGCTGCTATTCACATGCAGCATGCCTTCGCCATGATCCTAGGTCACTTCATTTTCCTTGTGGCAGCAGTAGAACCCTTTGCTTAAGGGAAGATATTTTGGACATTGAAACTACAGCTAGAAAGTTTGAGCTAGATGACAATGTTTTGCATGATGTTGCGCATTATCAAGAAGGTGATGACTTGGCTCTCCTCTTGAACATGTTTCCGCAAGCTGAAGAGGAAGGATATGTTCCATATTGTGAAATAAATTTTGAATGGACAGTAAAAGCTGAGGACCGGGTAGAACAAACATTTGATGAGCAAGCTTCCAATGCTCCTGCCTCTAGTATTGAACTCGTGCCCAATACTGGTTCGACAATGGAGCGGAATGACTGCCTCCCCACTAGTATTAATGTACAGGAAAATGCTTATAACTCTCAAGAAGGAAACAATATATCTGTGAAGCCTTTAAGAGACATTTCTAGGTGTAGAAGTGAAAGATTAGCTTGCTCACCTAGTGCTGACTATTTAAAAGTACATGAAAAAATAGCTCATGTTTCAGATGTTAGAACTGTTATTGACCAAGATGATGATGAGTCCGATTCAGAAATTTTCAGAGTGAAGCGACGTTTTAGAGCAGAAAATGGAAGTAGACGTGATTCAACATCAGTTAACATTGAGCACCAGGTATGTGGATACTGGGGTCTAAGTTTGGGTGCAATCTTTTGCTCTTTTTGGGTTTTCAAATTAAAGTTTCTAGTTAAACAGTTCTATGACAAGGGGAAAAGGTGTTGGTTTCTATTTGGCTTTTCAATGTGTATCTTCTGCATTCATTCATGTTCTCCCTTTCGTGTTTTGCATAAATTAGCCTTGTAA
Protein Sequence
- >Solyc08g005240.3.1
MSRSGGDALRSTASCGVRIRVNADMHSGSGTSLNERNVFPKHKVAKFDTSDLEWTDKIPECPVYYPSKEEFEDPIVYLQKITPEASKYGICKIVSPIMASVPAGVVLMKEKVGFKFTTRVQPLRLAEWDRDDRVTFFMSGRNYTFRDFEKMANKVYARRYCSAGCLPPTYMEKEFWHEIASGKTESVEYACDVDGSAFSSSPNDELGKCKWNMKRFSCLPKSVLRLLEKAIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGAAKTWYGIPGHAALDFEKVVRENVYNNDILTADGEDGAFDVLLQKTTFFPPNILSEHDVPVYKAVQKPGEFIVTFPRAYHAGFSHGFNCGEAVNFATGDWFPIGSIASRRYALLNRVPLLPNEELLCKEAMLLLTDLELEYSAISSADLITHHTIKVSFINLMRFHHRARWCFLKLKAFSGISSFSHSTILCSICKRDSYVAYLNCSCYSHAACLRHDPRSLHFPCGSSRTLCLREDILDIETTARKFELDDNVLHDVAHYQEGDDLALLLNMFPQAEEEGYVPYCEINFEWTVKAEDRVEQTFDEQASNAPASSIELVPNTGSTMERNDCLPTSINVQENAYNSQEGNNISVKPLRDISRCRSERLACSPSADYLKVHEKIAHVSDVRTVIDQDDDESDSEIFRVKRRFRAENGSRRDSTSVNIEHQVCGYWGLSLGAIFCSFWVFKLKFLVKQFYDKGKRCWFLFGFSMCIFCIHSCSPFRVLHKLAL*