Gene Details:

Functional Descriptions:

  • The SlGRAS9-SlZHD17 transcriptional cascade regulates chlorophyll and carbohydrate metabolism contributing to fruit quality traits in tomato.
  • Knockout or knockdown of SlGRAS9 or SlZHD17 resulted in marked increase in chlorophyll content, reprogrammed chloroplast biogenesis and enhanced accumulation of starch and soluble sugars.
  • Combined genome-wide transcriptomic profiling and promoter-binding experiments unveiled a complex mechanism in which the SlGRAS9/SlZHD17 regulatory module modulates the expression of chloroplast and sugar metabolism either via a sequential transcriptional cascade or through binding of both TFs to the same gene promoters, or, alternatively, via parallel pathways where each of the TFs act on different target genes.
  • Both SlGRAS9 and SlZHD17 can also directly bind the promoter of SlPOR-B to regulate its expression.

Literature:

Gene Resources:

Orthologs:

Sequences:

cDNA Sequence
  • >Solyc06g036170.1.1
    ATGTCCTCGGATTTCTCCGGCGGAGTTCCAGACTTTCACGGCGGCGCCGGTAGATCCAGCTTGATTCCGATGAACAACTCCCAGCCACAAATTCAATTAACCCAACGCCCTGACGGAGTTTCTCAGAATCTCCACCGGAGACCTATGTTCATCGGGAAACGGTCACTCGCAGCCTTTCAACAGCAGCAACAGTTTCAGTTTCTACAACAACAACAGCAGCAACAAGGTTTGGGATTTTATCTACGTAACGTGAAGCCTAGAAATTACCAGCAGGCATCTCCAATTTCTCCTCTAGATTACTCTGTTTCTTCCTCGTTGATTTCATCTGAATTTTCTCCGATGACTCCACGCCATCCTCTCCCGATTTCCACGGCGAACACGAACGGGGTTTTATCTTCTGGTAACCCGAATTGTTCAGCAGTTGCTTCTTACCTAAATCAGGTACAGAACAGTTTATACCAGGAATCAGAGGAAAAAATGATGAATCGACTGCATGAGTTAGAGAAACAGCTCCTAGAAGACAACAATGAGGAGGAAGAAGATACAGTCTCTGTTGTGACTAACAACGACGAGTGGTCGGAAACAATAAAGAATCTGATTACTCCGACTAGTAACCACTTATCCCCGGCATCATCTACGTCTTCATGTTCTTCTTCTATGGAATCTCCGCCAGTATCTTCTCCCAGGCAGTCTATTGTCGAAGCTGCTACCGCAATAATCGACGGAAAAACCAATGTTGCAGTACAGATCCTCACGCGCCTCGCACAGGTAGCTGATGTTAGAGGGTCTTCCGAACAGCGGCTGACGGCGTACATGGTTTCAGCACTCCGATCGCGCGTGAACTCCACGGAGTACCCACCGCCCGTGATGGAGCTGCGTAGCAAAGAGCACGCAGTTTCAGCTCAAAACCTCTACGAGATATCCCCGTGTTTCAAGCTAGGATTTATGGCAGCTAATTTCGCCATTGTTGAAGCTGTAGCTGATCATCCCTCAAACAAAATTCACGTCATTGATTTCGACATAGGACAAGGTGGACAATACTTGCATTTACTACACGCGCTAGCTTCCAAGAAAACAGATTATCCCATCAGCTTAAGAATCACGGCGATCACAACAGAGTTCACGGTCAGAGCTGATCACAGTTTAAAATCCATTGAAGATGATCTGAGAAGTCTAGCAAACAAAATCGGTATTTCCTTGATTTTCAAAGTAATTTCACGTACAATCACCGATTTGAGTAGGGGAAAATTAGGGATTGAACACGACGAAGCTTTAGCAGTGAATTTCGCATACAGATTATATAGATTACCCGACGAGAGCGTAACAACAGAGAATCTAAGAGACGAGCTTCTCCGGCGAGTGAAGGGGTTATCACCAAAGGTGGTGACATTAGTAGAGCAAGAGTTGAACGGGAACACGGCGGCGTTTGTGGCGCGTGTAAACGAGGCGTGTGGATATTACGGAGCATTGTTGGATTCACTGGATGCAACTGTATCAAGAGAGGAAACGGGTCGGGTCAAGATCGAAGAAGGGCTGAGTCGTAAATTAACAAACTCGGTAGCGTGTGAAGGTAGGGATCGTTTGGAGAGATGCGAGGTGTTTGGTAAATGGAGGGCCCGAATGAGTATGGCTGGGTTCGGGCCGAGGCCCATGAGTCAACAAATTGCTGATTCACTGCTTAAGAGGCTTAACTCGGGCCCACGTGGCAATCCAGGATTCAATGTGAATGAACAAAGTGGGGGTATTAGGTTTGGATGGATGGGAAAAACCCTCACCGTTGCTTCTGCTTGGTGTTAA
CDS Sequence
  • >Solyc06g036170.1.1
    ATGTCCTCGGATTTCTCCGGCGGAGTTCCAGACTTTCACGGCGGCGCCGGTAGATCCAGCTTGATTCCGATGAACAACTCCCAGCCACAAATTCAATTAACCCAACGCCCTGACGGAGTTTCTCAGAATCTCCACCGGAGACCTATGTTCATCGGGAAACGGTCACTCGCAGCCTTTCAACAGCAGCAACAGTTTCAGTTTCTACAACAACAACAGCAGCAACAAGGTTTGGGATTTTATCTACGTAACGTGAAGCCTAGAAATTACCAGCAGGCATCTCCAATTTCTCCTCTAGATTACTCTGTTTCTTCCTCGTTGATTTCATCTGAATTTTCTCCGATGACTCCACGCCATCCTCTCCCGATTTCCACGGCGAACACGAACGGGGTTTTATCTTCTGGTAACCCGAATTGTTCAGCAGTTGCTTCTTACCTAAATCAGGTACAGAACAGTTTATACCAGGAATCAGAGGAAAAAATGATGAATCGACTGCATGAGTTAGAGAAACAGCTCCTAGAAGACAACAATGAGGAGGAAGAAGATACAGTCTCTGTTGTGACTAACAACGACGAGTGGTCGGAAACAATAAAGAATCTGATTACTCCGACTAGTAACCACTTATCCCCGGCATCATCTACGTCTTCATGTTCTTCTTCTATGGAATCTCCGCCAGTATCTTCTCCCAGGCAGTCTATTGTCGAAGCTGCTACCGCAATAATCGACGGAAAAACCAATGTTGCAGTACAGATCCTCACGCGCCTCGCACAGGTAGCTGATGTTAGAGGGTCTTCCGAACAGCGGCTGACGGCGTACATGGTTTCAGCACTCCGATCGCGCGTGAACTCCACGGAGTACCCACCGCCCGTGATGGAGCTGCGTAGCAAAGAGCACGCAGTTTCAGCTCAAAACCTCTACGAGATATCCCCGTGTTTCAAGCTAGGATTTATGGCAGCTAATTTCGCCATTGTTGAAGCTGTAGCTGATCATCCCTCAAACAAAATTCACGTCATTGATTTCGACATAGGACAAGGTGGACAATACTTGCATTTACTACACGCGCTAGCTTCCAAGAAAACAGATTATCCCATCAGCTTAAGAATCACGGCGATCACAACAGAGTTCACGGTCAGAGCTGATCACAGTTTAAAATCCATTGAAGATGATCTGAGAAGTCTAGCAAACAAAATCGGTATTTCCTTGATTTTCAAAGTAATTTCACGTACAATCACCGATTTGAGTAGGGGAAAATTAGGGATTGAACACGACGAAGCTTTAGCAGTGAATTTCGCATACAGATTATATAGATTACCCGACGAGAGCGTAACAACAGAGAATCTAAGAGACGAGCTTCTCCGGCGAGTGAAGGGGTTATCACCAAAGGTGGTGACATTAGTAGAGCAAGAGTTGAACGGGAACACGGCGGCGTTTGTGGCGCGTGTAAACGAGGCGTGTGGATATTACGGAGCATTGTTGGATTCACTGGATGCAACTGTATCAAGAGAGGAAACGGGTCGGGTCAAGATCGAAGAAGGGCTGAGTCGTAAATTAACAAACTCGGTAGCGTGTGAAGGTAGGGATCGTTTGGAGAGATGCGAGGTGTTTGGTAAATGGAGGGCCCGAATGAGTATGGCTGGGTTCGGGCCGAGGCCCATGAGTCAACAAATTGCTGATTCACTGCTTAAGAGGCTTAACTCGGGCCCACGTGGCAATCCAGGATTCAATGTGAATGAACAAAGTGGGGGTATTAGGTTTGGATGGATGGGAAAAACCCTCACCGTTGCTTCTGCTTGGTGTTAA
Protein Sequence
  • >Solyc06g036170.1.1
    MSSDFSGGVPDFHGGAGRSSLIPMNNSQPQIQLTQRPDGVSQNLHRRPMFIGKRSLAAFQQQQQFQFLQQQQQQQGLGFYLRNVKPRNYQQASPISPLDYSVSSSLISSEFSPMTPRHPLPISTANTNGVLSSGNPNCSAVASYLNQVQNSLYQESEEKMMNRLHELEKQLLEDNNEEEEDTVSVVTNNDEWSETIKNLITPTSNHLSPASSTSSCSSSMESPPVSSPRQSIVEAATAIIDGKTNVAVQILTRLAQVADVRGSSEQRLTAYMVSALRSRVNSTEYPPPVMELRSKEHAVSAQNLYEISPCFKLGFMAANFAIVEAVADHPSNKIHVIDFDIGQGGQYLHLLHALASKKTDYPISLRITAITTEFTVRADHSLKSIEDDLRSLANKIGISLIFKVISRTITDLSRGKLGIEHDEALAVNFAYRLYRLPDESVTTENLRDELLRRVKGLSPKVVTLVEQELNGNTAAFVARVNEACGYYGALLDSLDATVSREETGRVKIEEGLSRKLTNSVACEGRDRLERCEVFGKWRARMSMAGFGPRPMSQQIADSLLKRLNSGPRGNPGFNVNEQSGGIRFGWMGKTLTVASAWC*