Gene Details:
- Gene ID: Solyc05g015840
- Gene Symbol: SlSPL13
- Gene Name: SQUAMOSA PROMOTER BINDING PROTEIN LIKE 13
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- miR156a-targeted SBP-Box transcription factor SlSPL13 regulates inflorescence morphogenesis by directly activating SFT in tomato.
- SPL13 positively regulates SFT expression by directly binding regulatory cis-elements in the SFT promoter.
- SPL13 is a key factor in miR156a-regulated tomato plant development.
- We found that SPL13 affects fruit yield in tomato by directly targeting SFT—a major regulator of flowering. Our findings provide new insight into the miR156a-SlSPL-based mechanism that regulates tomato yield and plant architecture.
Function-related keywords:
- transcription-factor , development , plant-development , yield , inflorescence , architecture , inflorescence-architecture , transcription-regulator , plant-architecture , flowering , inflorescence-development
Literature:
- miR156a-targeted SBP-Box transcription factor SlSPL13 regulates inflorescence morphogenesis by directly activating SFT in tomato. DOI: 10.1111/pbi.13331 ; PMID: 31916387
Related News:
Gene Resources:
- NCBI ID: 101251286
- UniProt accessions: A0A3Q7HAE1
Orthologs:
Sequences:
cDNA Sequence
- >Solyc05g015840.3.1
TGGCTGTTTGTCTATGATGCCTATTGGCTATTAACCTAAAAAGTGATGCAATCTTTTCTCCCTTTCCAACTCTCACATAGAAGTTCAATTCCTTGAATCCTCACTCTTTTCAAGCTCGCTGAGTATATTTCATCCCTACCCCTATACTAGTGGTGGATGGGATGAGCATAAAAAGGAGGTGATTAAGGTCTTGGAGCGGACAAAAGCTAAATTGTAACTATACTTTCACATTTTGTGACGTTGTTAACTCAGGTCAAGAATTTAGAGGCAAAAATTGAATTGTGTGATGGAATCATCATCATCGTCATCAAAAAGGGCCAAGGCACCAGGGAATATAGCTCATTGCTTGGTTGATGGGTGTAATGCAGACCTAAGTGAATGCAGAGAGTATCATCGCCGGCATAAAGTTTGTGAGGTGCATTCAAAGACTGCCAAAGTCACAATTGCAGGTCGAGACCAACGCTTCTGTCAACAATGTAGCAGGTTTCATTCATTGGTAGAATTTGATGATGGAAAGAGAAGCTGTCGGAAACGTCTTGATGGGCATAACAGGCGTCGAAGGAAGCCCCAGCCAGATTCTATGGCAAAAAATTCTGGAATACTTTTTGGCCAACAAGGAACGAAACTCCTGTCATTTAGCAGTCAACAAATATTTCCAAGTGCAGTTGTGAGCTCTGCATGGGCTGGTGTTGTCAAAACGGACAGCGATATGGTATTATACAACAACCAATCTCATATGAATGGTATGGACAGTCAAAACTCGTTCCCTGACTCTTCGGGTCATAGCTATAAAGGAGGAAGCCAATTCCAGTTCATGCAAGGCAGTGATCGTAGTCTGACTGAAGCGCCACTTTTTGAACATCCCACTTCTGCAGCAGGAATTTCTAGCAGCGGACAAAAGATCTTCTCGAGTGGATTAAATGATATTGTTGATTCTGATCGTGCTCTCTCTCTTCTGTCATCAGCACCTGCTGTAACTAGGGAGATTGGTTTGAGTCACATGGTGCAGCAGCCTGCCTCTATCCCGCGTTCCCAGTCACATGGCCTGCAGTATGATGGTCTAAGCCATTTCCCTTTTGCTCAAGATTTCAATAGCAAACCTCAAGATTCACATGTCAGCAACAGCAGCAGCCCTCTCCATTTCCATGATATGTTGCAAAATGCACAAGATGAATCATCTACAATCCCTGCCTCTCAGCAAACACTAGCCTTTATGTGGGACTAAACTTTTAGCCTGCCTTGCTTTCTGCGGATATCATCAAGCAAATTCCGGTGAATCTTCAATCCATCCAACCAAATGCTATTCCATTTCAGAATGTTAAGCTTCCAATTAGCAAACACTCCACATGATTCGAATGTTTGTGTAATGTATCACTTAACTTTTCTATATTTTCCCTTCATTATGACGACGATTCTCTTCTTTGTTCTCTGAATTTTCCATCCCATCTCCAAAATGTATTAAAAAATCTCTTAATTTAATTATGAAGTATATTCCAGCTTTCTGGG
CDS Sequence
- >Solyc05g015840.3.1
ATGGAATCATCATCATCGTCATCAAAAAGGGCCAAGGCACCAGGGAATATAGCTCATTGCTTGGTTGATGGGTGTAATGCAGACCTAAGTGAATGCAGAGAGTATCATCGCCGGCATAAAGTTTGTGAGGTGCATTCAAAGACTGCCAAAGTCACAATTGCAGGTCGAGACCAACGCTTCTGTCAACAATGTAGCAGGTTTCATTCATTGGTAGAATTTGATGATGGAAAGAGAAGCTGTCGGAAACGTCTTGATGGGCATAACAGGCGTCGAAGGAAGCCCCAGCCAGATTCTATGGCAAAAAATTCTGGAATACTTTTTGGCCAACAAGGAACGAAACTCCTGTCATTTAGCAGTCAACAAATATTTCCAAGTGCAGTTGTGAGCTCTGCATGGGCTGGTGTTGTCAAAACGGACAGCGATATGGTATTATACAACAACCAATCTCATATGAATGGTATGGACAGTCAAAACTCGTTCCCTGACTCTTCGGGTCATAGCTATAAAGGAGGAAGCCAATTCCAGTTCATGCAAGGCAGTGATCGTAGTCTGACTGAAGCGCCACTTTTTGAACATCCCACTTCTGCAGCAGGAATTTCTAGCAGCGGACAAAAGATCTTCTCGAGTGGATTAAATGATATTGTTGATTCTGATCGTGCTCTCTCTCTTCTGTCATCAGCACCTGCTGTAACTAGGGAGATTGGTTTGAGTCACATGGTGCAGCAGCCTGCCTCTATCCCGCGTTCCCAGTCACATGGCCTGCAGTATGATGGTCTAAGCCATTTCCCTTTTGCTCAAGATTTCAATAGCAAACCTCAAGATTCACATGTCAGCAACAGCAGCAGCCCTCTCCATTTCCATGATATGTTGCAAAATGCACAAGATGAATCATCTACAATCCCTGCCTCTCAGCAAACACTAGCCTTTATGTGGGACTAA
Protein Sequence
- >Solyc05g015840.3.1
MESSSSSSKRAKAPGNIAHCLVDGCNADLSECREYHRRHKVCEVHSKTAKVTIAGRDQRFCQQCSRFHSLVEFDDGKRSCRKRLDGHNRRRRKPQPDSMAKNSGILFGQQGTKLLSFSSQQIFPSAVVSSAWAGVVKTDSDMVLYNNQSHMNGMDSQNSFPDSSGHSYKGGSQFQFMQGSDRSLTEAPLFEHPTSAAGISSSGQKIFSSGLNDIVDSDRALSLLSSAPAVTREIGLSHMVQQPASIPRSQSHGLQYDGLSHFPFAQDFNSKPQDSHVSNSSSPLHFHDMLQNAQDESSTIPASQQTLAFMWD*