Information report for SlS5H
Gene Details
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Functional Descriptions
- SlS5H silencing reveals specific pathogen-triggered salicylic acid metabolism in tomato.
- We have studied the induction of tomato SlS5H gene by different pathogens, and its expression correlates with the accumulation of GA.
- SlS5H-silenced tomato plants were generated, displaying a smaller size and early senescence, together with hypersusceptibility to the necrotrophic fungus Botrytis cinerea.
- Using SlS5H-silenced plants as a tool to unbalance SA levels, we have studied the re-routing of SA upon CEVd and Pst infections and found that, despite the common origin and role for SA in plant pathogenesis, there appear to be different pathogen-specific, alternate homeostasis pathways.
Functional Keywords
- senescence , salicylic-acid , pathogen , homeostasis , ga , sa
Literature and News
Gene Resources
- NCBI ID: 100736526
- UniProt accessions: A0A3Q7FMH7
- AlphaFoldDB: A0A3Q7FMH7
- EnsemblPlants: Solyc03g080190.3.1
- Gramene: Solyc03g080190.3.1
- KEGG: sly:100736526
- GO: GO:0002238 , GO:0009805 , GO:0016706 , GO:0031418 , GO:0046872
- OMA: EHTDYEC
- InterPro: IPR005123 , IPR026992 , IPR027443 , IPR044861 , IPR050295
- PANTHER: PTHR47991
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- OrthoDB: A0A3Q7FMH7
- Pfam: PF03171 , PF14226
- SMR: A0A3Q7FMH7
- STRING: 4081.A0A3Q7FMH7
Sequences
cDNA Sequence
- >Solyc03g080190.3.1
TTCTCAGAAGGATGAATAAGAATATTGTGAGCAAATCTTCTTTCATTTGTAATTCAAAAATTATTACTCCTTCTTTACTTTTCCAATTTAATTATATTTATATGCAACTCCATATATATTATAAGCCATAGATTCCATGGAAACCAAAGTTATTTCTAGCGGAATCAACCACTCTACTCTTCCTCAAAGTTACATCCGACCCGAATCCGATAGACCACGTCTATCGGAAGTGGTCGATTGTGAAAATGTTCCAATAATTGACTTAAGTTGCGGAGATCAAGCTCAAATAATTCGTCAAATTGGAGAAGCTTGTCAAACTTATGGTTTCTTTCAGGTAATTAATCATGGTGTACCAAAGGAAGTTGTAGAGAAAATGCTAGGGGTAGCTGGGGAATTTTTCAATTTACCAGTAGAAGAGAAACTAAAATTATATTCAGATGATCCTTCAAAGACCATGAGATTATCAACAAGTTTTAATGTTAAAAAGGAGACAGTTCATAATTGGAGAGATTATCTCAGACTTCATTGTTATCCTCTAGAGAAGTATGCTCCTGAATGGCCTTCTAATCCATCATCTTTCAGGGAAATCGTGAGCAGATATTGCAGGGAAATTCGTCAACTCGGATTTAGATTAGAAGAAGCCATAGCAGAAAGCCTGGGGTTAGATAAAGAGTGTATAAAAGATGTATTGGGTGAACAAGGACAACATATGGCTATCAATTATTATCCTCCTTGTCCACAACCAGAACTTACTTATGGGCTTCCGGCCCATACTGATCCAAATTCACTTACAATTCTTCTTCAAGACTTGCAAGTTGCGGGTCTTCAAGTTCTTAAAGATGGCAAATGGTTAGCTGTAAAACCTCAACCTGACGCCTTTGTCATTAATCTTGGGGATCAATTGCAGGCAGTAAGTAACGGTAAGTACAGAAGTGTATGGCATCGAGCTATTGTGAATTCAGATCAAGCTAGGATGTCAGTGGCTTCGTTTCTATGTCCGTGTGATAGCGCGAAAATCAGTGCACCAAAGCTGCTGACAGAAGATGGATCTCCAGTGATTTATCAAGACTTTACGTATGCTGAGTATTACAACAAGTTCTGGAGCAGGAATTTGGACCAGCAACATTGTTTGGAACTTTTCAAGAACTAAGTCGTTTGGTTCATAGGGATGTCCCGGAAGTAAGTTTAGAATTAAATTTATACTTTGTTTGGTTGAGGGTGAGATAAATCTAGACGTTCAATCAAACAGAATATAAATTTAATCTCAAACTTAATCCTGAATATCCCATCCAATGCCAATATAATTTAGTCAGCAAACCAAATGACGCGAAATCATAAGTAGTACCACTTTCAGTACTTAATTTTTTTTTTTAGATTCGAGTTATAGTTCTGGGGTGGGAATTAAACTAGGTTGAAATAAGAAAAATGGAGACACCAATTACCTTGTTGATTTACCCAAATTACATGACTGCTCCAATGTTTTGTTACTGTCAAGTAGTGTTAGCAATTGGGCTGGAGAAATGGACTACGTTGGAATAATAATAATTTGTAGCAGTAATTTCATTGTTTACTGTATTTACTTCACTGTATGAGTTATTGAAGGCTATGATAATATATTAAAACA
CDS Sequence
- >Solyc03g080190.3.1
ATGGAAACCAAAGTTATTTCTAGCGGAATCAACCACTCTACTCTTCCTCAAAGTTACATCCGACCCGAATCCGATAGACCACGTCTATCGGAAGTGGTCGATTGTGAAAATGTTCCAATAATTGACTTAAGTTGCGGAGATCAAGCTCAAATAATTCGTCAAATTGGAGAAGCTTGTCAAACTTATGGTTTCTTTCAGGTAATTAATCATGGTGTACCAAAGGAAGTTGTAGAGAAAATGCTAGGGGTAGCTGGGGAATTTTTCAATTTACCAGTAGAAGAGAAACTAAAATTATATTCAGATGATCCTTCAAAGACCATGAGATTATCAACAAGTTTTAATGTTAAAAAGGAGACAGTTCATAATTGGAGAGATTATCTCAGACTTCATTGTTATCCTCTAGAGAAGTATGCTCCTGAATGGCCTTCTAATCCATCATCTTTCAGGGAAATCGTGAGCAGATATTGCAGGGAAATTCGTCAACTCGGATTTAGATTAGAAGAAGCCATAGCAGAAAGCCTGGGGTTAGATAAAGAGTGTATAAAAGATGTATTGGGTGAACAAGGACAACATATGGCTATCAATTATTATCCTCCTTGTCCACAACCAGAACTTACTTATGGGCTTCCGGCCCATACTGATCCAAATTCACTTACAATTCTTCTTCAAGACTTGCAAGTTGCGGGTCTTCAAGTTCTTAAAGATGGCAAATGGTTAGCTGTAAAACCTCAACCTGACGCCTTTGTCATTAATCTTGGGGATCAATTGCAGGCAGTAAGTAACGGTAAGTACAGAAGTGTATGGCATCGAGCTATTGTGAATTCAGATCAAGCTAGGATGTCAGTGGCTTCGTTTCTATGTCCGTGTGATAGCGCGAAAATCAGTGCACCAAAGCTGCTGACAGAAGATGGATCTCCAGTGATTTATCAAGACTTTACGTATGCTGAGTATTACAACAAGTTCTGGAGCAGGAATTTGGACCAGCAACATTGTTTGGAACTTTTCAAGAACTAA
Protein Sequence
- >Solyc03g080190.3.1
METKVISSGINHSTLPQSYIRPESDRPRLSEVVDCENVPIIDLSCGDQAQIIRQIGEACQTYGFFQVINHGVPKEVVEKMLGVAGEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVKKETVHNWRDYLRLHCYPLEKYAPEWPSNPSSFREIVSRYCREIRQLGFRLEEAIAESLGLDKECIKDVLGEQGQHMAINYYPPCPQPELTYGLPAHTDPNSLTILLQDLQVAGLQVLKDGKWLAVKPQPDAFVINLGDQLQAVSNGKYRSVWHRAIVNSDQARMSVASFLCPCDSAKISAPKLLTEDGSPVIYQDFTYAEYYNKFWSRNLDQQHCLELFKN*