Information report for SlARF8B
Gene Details
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Functional Descriptions
- Auxin homeostasis is maintained by sly-miR167-SlARF8A/B-SlGH3.4 feedback module in the development of locular and placental tissues of tomato fruits.
- Two SlARF transcription factors, SlARF8B and SlARF8A (SlARF8A/B), promote the development of locular and placenta tissues.
- In slarf8a, SlARF8B, and slarf8a/b mutants, the auxin (IAA) levels are decreased, whereas the levels of inactive IAA conjugates including IAA-Ala, IAA-Asp, and IAA-Glu are increased.
- An important regulatory module constituted by sly-miR167-SlARF8A/B-SlGH3.4 during the development of locular and placenta tissues of tomato fruits.
Functional Keywords
- development , auxin , iaa , homeostasis
Literature and News
Gene Resources
- NCBI ID: 100301945
- UniProt accessions: A0A3Q7EY57
- AlphaFoldDB: A0A3Q7EY57
- EnsemblPlants: Solyc02g037530.3.1
- Gramene: Solyc02g037530.3.1
- GO: GO:0003677 , GO:0005634 , GO:0006355 , GO:0009734
- OMA: GQIDPPN
- InterPro: IPR003340 , IPR010525 , IPR015300 , IPR033389 , IPR044835 , IPR053793
- PANTHER: PTHR31384 , PTHR31384:SF181
- SUPFAM: SSF101936 , SSF54277
- PROSITE: PS50863 , PS51745
- Gene3D: 2.30.30.1040 , 2.40.330.10 , 3.10.20.90
- Pfam: PF02309 , PF02362 , PF06507
- CDD: cd10017
- STRING: 4081.A0A3Q7EY57
Sequences
cDNA Sequence
- >Solyc02g037530.3.1
ATTACTATTACCTCTCTTTTCTCTCTCTCTCTCAACTGTTATCAGGTCGACCTTGGTCGGGTGGGGTATAAAGAGACTAACAGCACACCCTTTCTCTCTCTCCCTCTCTTCAAAACTGATAGTGATATCAGAAAAAGCTGAAGTTGAGCTCAGCTTAGATTCTATCAACTTATTGAATTGAAGAAATTACAATTTAATGGAAGTATTGGAGAAAGAGTAGCTAGCTGAAAGGACTTTTTGGTTAATGCATGTGGGGAGATCATATTCATAATGGAGAAAAGGTGGGGTATCTTGAAGATAGGGTTTCAGTTGATTTTTGGAGTTGGAATTGAGGGTTTTCTGCAATTCAGTGGATTATTACAGAGAAGGGTGTAGAGTGAGTGTAGTACTATAATTTTTCTCAAGAGGAAGTGGGTTTTTAAATAAATAAATAAAATATAATTATGAAGCTTTCAACATCAGGAATGGGTCAGCAGGCTCATGAAGGAGGAGAGAAAAAGTGTTTGAACTCAGAGCTATGGCATGCTTGTGCTGGTCCTCTGGTGTGCCTACCAACTGTCGGAAGTCGAGTTGTTTACTTTCCTCAGGGTCATAGTGAACAGGTAGCTGCAACAACTAATAAAGAAGTTGATGCACATATACCCAATTACCCAAATTTGTCGCCGCAGTTGATCTGTCAACTCCACAATGTCACAATGCATGCAGATGTTGAAACAGACGAAGTGTACGCACAAATGACTTTGCAGCCCTTGACACCGGAAGAACAAAAAGATACATATCTTCCTGTTGAGTTTGGAATCCCTAGCAAGCAGCCTACTAACTATTTTTGTAAGACGCTGACTGCAAGTGATACTAGCACGCATGGTGGCTTTTCTGTCCCTCGTCGTGCCGCAGAGAAAGTTTTTCCTCCTCTGGATTTCTCGCAGACACCACCTGCCCAAGAACTAATTGCAAGGGATCTGCATGATGTTGAATGGAAGTTCAGGCATATTTTCCGAGGACAGCCTAAGCGGCATCTTCTTACCACTGGCTGGAGTGTGTTTGTTAGCGCCAAAAGGCTTGTTGCTGGAGATTCTGTTCTTTTCATTTGGAATGAGAAAAATCAGCTCCTTCTAGGAATTCGACGTGCAGTTCGACCACAGACTGTGATGCCATCATCAGTTCTATCTAGTGATAGCATGCACATTGGATTACTTGCTGCTGCTGCTCATGCTGCTGCTACTAATAGCTGTTTCAATGTCTTTTTTAACCCAAGGGCTAGCCCATCCGAATTTGTTATACCTCTTTCAAAATACATCAAAGCTGTATATCACACTCGTGTTTCTGTTGGAATGCGCTTTCGGATGCTATTTGAAACTGAAGAATCAAGTGTTCGAAGATACATGGGCACAATTACTGGGATTGGTGACTTAGATCCAGTTCGCTGGGCAAACTCTCACTGGCGGTCTGTCAAGGTTGGTTGGGATGAGTCAACTGCAGGAGAGAGGCAACCAAGGGTCTCATTATGGGAGATTGAGCCTTTGACTACTTTTCCGATGTATCCATCTCTTTTTCCTCTAAGGCTAAAGAGGCCTTTCTATCAAGGAACCTCATCTTATCAGGATAGTAACAATGAAGCTATTAATCGAATGTCATGGTTAAGAGGGAATGCTGGTGAGCTAGGACATCATTCAATGAATCTTCAGTCTTTTGGCATGCTTCCTTGGATGCAACAGAGAGTCGATTCAACAATTCTCCCAAATGATATTAATCAGCACTATCAAGCTATGCTGGCTACTGGCTTGCAAAGTTTTGGGAGTGGAGATTTACTGAAACAGCAATTAATGCAGTTTCAGCAGCCTGTCCAATATCTGCAACATGCAAGTACTGAGAATTCAATTTTGCATCAGCAGCAGCAGCAGCAGCAGCAAATAATGCAGCAAGCAGTTCATCAGCATATGCTGCCTGCTCAAACCCAAATGCTGTCAGAGAACCTTCAAAGGCAATCCCAGCATCAATCCAATAATCAGTCAGAAGAACAGGCTCACCAACACACTTACCAAGAAGCATTCCAACTCCCGCACGACCAGCTCCAGCAGAGGCAACCATCAAATGTTACCTCTCCATTTTTGAAAGCAGATTTTGCAGATTTGACCTCTAAGTTTTCAGCATCTGTTGCCCCTTCAGGCGTGCAAAATATGCTTGGTTCGTTGTGTTCTGAAGGAAGTAATAATTCATTGAATATCAACAGAACTGGTCAGTCCGTGATCATAGAGCAGTCGCCTCAACAGTCCTGGATGTCAAAATTTACAGAGTCACAACTAAATACGTGCTCCAACTCATCATCACTTCCAACTTACGGGAAAGATACATCCAATCCTAGGGGAAATTGTAGCTTGGATTCCCAGAATCAAGCGCTTTTTGGTGCTAATATTGATTCTTCAGGGCATCTCCTTCCGACCACAGTGTCTAATGTTACTACTACATGTGCTGATATGTCCTTAATGCCACTTGGGGCTTCTGGATATCAGAATTCTTTATATGGTTATGTGCAAGACTCTTCTGAGTTGTTGCACAATGCAGGACAAATTGATCCACCAAATGCAACCCATACATTTGTCAAGGTTTACAAATCGGGATGTGTTGGGAGGTCACTGGATATCACTCAGTTCCACAGCTATCATGAGCTGCGACGGGAATTGGGGCAGATGTTCGGTATTGAGGGATTCCTTGAAGACCCTCAAAGATCAGGCTGGCAGCTTGTATTTGTTGACAGGGAGAATGATATCCTTCTCCTTGGAGACGATCCATGGGAGGCGTTTGTCAATAACGTCTGGTATATAAAAATCCTTTCACCCGAAGATGTGCAGAAGCTGGGAAAGGAAGAGGCTGAATCCCTGAACCGTGGAGCGGTTGAAAGGATGAGCAGCACTAATGCTGATGATCGGGATCTTATTTCTGGAATGCCATCTCTTGGATCGCTGGAGTACTGATTGTTGGAATGCTTCAAAAGAAGAGGACTGATTCTGATTCTCAATCTTCTCAAGGGTCAGAAATTCAAATTTCATGCTTCATAACCTGGCTTCTTTAGCTTTCGTCTAATTGGTCCATCTCCCAATTGTATGTTGTATTTTGCGTTTGGATGTAGCTGTAATAGGACTTAAGGGTTCTCCCATTTGTATGGTGTAGTTTTCATTGTAATCCTGTTGTACAAGTTAGTATAATTTACTGTACGGCTCAAGATGAGACG
CDS Sequence
- >Solyc02g037530.3.1
ATGGGTCAGCAGGCTCATGAAGGAGGAGAGAAAAAGTGTTTGAACTCAGAGCTATGGCATGCTTGTGCTGGTCCTCTGGTGTGCCTACCAACTGTCGGAAGTCGAGTTGTTTACTTTCCTCAGGGTCATAGTGAACAGGTAGCTGCAACAACTAATAAAGAAGTTGATGCACATATACCCAATTACCCAAATTTGTCGCCGCAGTTGATCTGTCAACTCCACAATGTCACAATGCATGCAGATGTTGAAACAGACGAAGTGTACGCACAAATGACTTTGCAGCCCTTGACACCGGAAGAACAAAAAGATACATATCTTCCTGTTGAGTTTGGAATCCCTAGCAAGCAGCCTACTAACTATTTTTGTAAGACGCTGACTGCAAGTGATACTAGCACGCATGGTGGCTTTTCTGTCCCTCGTCGTGCCGCAGAGAAAGTTTTTCCTCCTCTGGATTTCTCGCAGACACCACCTGCCCAAGAACTAATTGCAAGGGATCTGCATGATGTTGAATGGAAGTTCAGGCATATTTTCCGAGGACAGCCTAAGCGGCATCTTCTTACCACTGGCTGGAGTGTGTTTGTTAGCGCCAAAAGGCTTGTTGCTGGAGATTCTGTTCTTTTCATTTGGAATGAGAAAAATCAGCTCCTTCTAGGAATTCGACGTGCAGTTCGACCACAGACTGTGATGCCATCATCAGTTCTATCTAGTGATAGCATGCACATTGGATTACTTGCTGCTGCTGCTCATGCTGCTGCTACTAATAGCTGTTTCAATGTCTTTTTTAACCCAAGGGCTAGCCCATCCGAATTTGTTATACCTCTTTCAAAATACATCAAAGCTGTATATCACACTCGTGTTTCTGTTGGAATGCGCTTTCGGATGCTATTTGAAACTGAAGAATCAAGTGTTCGAAGATACATGGGCACAATTACTGGGATTGGTGACTTAGATCCAGTTCGCTGGGCAAACTCTCACTGGCGGTCTGTCAAGGTTGGTTGGGATGAGTCAACTGCAGGAGAGAGGCAACCAAGGGTCTCATTATGGGAGATTGAGCCTTTGACTACTTTTCCGATGTATCCATCTCTTTTTCCTCTAAGGCTAAAGAGGCCTTTCTATCAAGGAACCTCATCTTATCAGGATAGTAACAATGAAGCTATTAATCGAATGTCATGGTTAAGAGGGAATGCTGGTGAGCTAGGACATCATTCAATGAATCTTCAGTCTTTTGGCATGCTTCCTTGGATGCAACAGAGAGTCGATTCAACAATTCTCCCAAATGATATTAATCAGCACTATCAAGCTATGCTGGCTACTGGCTTGCAAAGTTTTGGGAGTGGAGATTTACTGAAACAGCAATTAATGCAGTTTCAGCAGCCTGTCCAATATCTGCAACATGCAAGTACTGAGAATTCAATTTTGCATCAGCAGCAGCAGCAGCAGCAGCAAATAATGCAGCAAGCAGTTCATCAGCATATGCTGCCTGCTCAAACCCAAATGCTGTCAGAGAACCTTCAAAGGCAATCCCAGCATCAATCCAATAATCAGTCAGAAGAACAGGCTCACCAACACACTTACCAAGAAGCATTCCAACTCCCGCACGACCAGCTCCAGCAGAGGCAACCATCAAATGTTACCTCTCCATTTTTGAAAGCAGATTTTGCAGATTTGACCTCTAAGTTTTCAGCATCTGTTGCCCCTTCAGGCGTGCAAAATATGCTTGGTTCGTTGTGTTCTGAAGGAAGTAATAATTCATTGAATATCAACAGAACTGGTCAGTCCGTGATCATAGAGCAGTCGCCTCAACAGTCCTGGATGTCAAAATTTACAGAGTCACAACTAAATACGTGCTCCAACTCATCATCACTTCCAACTTACGGGAAAGATACATCCAATCCTAGGGGAAATTGTAGCTTGGATTCCCAGAATCAAGCGCTTTTTGGTGCTAATATTGATTCTTCAGGGCATCTCCTTCCGACCACAGTGTCTAATGTTACTACTACATGTGCTGATATGTCCTTAATGCCACTTGGGGCTTCTGGATATCAGAATTCTTTATATGGTTATGTGCAAGACTCTTCTGAGTTGTTGCACAATGCAGGACAAATTGATCCACCAAATGCAACCCATACATTTGTCAAGGTTTACAAATCGGGATGTGTTGGGAGGTCACTGGATATCACTCAGTTCCACAGCTATCATGAGCTGCGACGGGAATTGGGGCAGATGTTCGGTATTGAGGGATTCCTTGAAGACCCTCAAAGATCAGGCTGGCAGCTTGTATTTGTTGACAGGGAGAATGATATCCTTCTCCTTGGAGACGATCCATGGGAGGCGTTTGTCAATAACGTCTGGTATATAAAAATCCTTTCACCCGAAGATGTGCAGAAGCTGGGAAAGGAAGAGGCTGAATCCCTGAACCGTGGAGCGGTTGAAAGGATGAGCAGCACTAATGCTGATGATCGGGATCTTATTTCTGGAATGCCATCTCTTGGATCGCTGGAGTACTGA
Protein Sequence
- >Solyc02g037530.3.1
MGQQAHEGGEKKCLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPNLSPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTYLPVEFGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAVRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFNVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPFYQGTSSYQDSNNEAINRMSWLRGNAGELGHHSMNLQSFGMLPWMQQRVDSTILPNDINQHYQAMLATGLQSFGSGDLLKQQLMQFQQPVQYLQHASTENSILHQQQQQQQQIMQQAVHQHMLPAQTQMLSENLQRQSQHQSNNQSEEQAHQHTYQEAFQLPHDQLQQRQPSNVTSPFLKADFADLTSKFSASVAPSGVQNMLGSLCSEGSNNSLNINRTGQSVIIEQSPQQSWMSKFTESQLNTCSNSSSLPTYGKDTSNPRGNCSLDSQNQALFGANIDSSGHLLPTTVSNVTTTCADMSLMPLGASGYQNSLYGYVQDSSELLHNAGQIDPPNATHTFVKVYKSGCVGRSLDITQFHSYHELRRELGQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWEAFVNNVWYIKILSPEDVQKLGKEEAESLNRGAVERMSSTNADDRDLISGMPSLGSLEY*