Gene Details:
- Gene ID: Solyc01g100200
- Gene Symbol: SlGRAS4
- Gene Name: GRAS transcription factor 4
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- SlGRAS4 mediates a novel regulatory pathway promoting chilling tolerance in tomato.
- Demonstrate that SlGRAS4, encoding a transcription factor induced by low temperature, promotes chilling tolerance in tomato leaves and fruit.
- SlGRAS4 can also directly bind tomato SlCBF promoters to activate their transcription without inducing any growth retardation.
- The study identifies the SlGRAS4-regulon as a new cold response pathway conferring cold stress tolerance in tomato independently of the ICE1-CBF pathway.
- SlGRAS4 accelerates fruit ripening by regulating ethylene biosynthesis genes and SlMADS1 in tomato.
Function-related keywords:
- transcription-factor , temperature , growth , stress , tolerance , cold-tolerance , cold-stress , ethylene , cold , stress-tolerance , chilling , chilling-stress , chilling-tolerance , stress-response , ethylene-response , temperature-response
Literature:
- SlGRAS4 mediates a novel regulatory pathway promoting chilling tolerance in tomato. DOI: 10.1111/pbi.13328 ; PMID: 31916348
- Genome-wide identification, phylogeny and expression analysis of GRAS gene family in tomato. DOI: 10.1186/s12870-015-0590-6 ; PMID: 26302743
- SlGRAS4 accelerates fruit ripening by regulating ethylene biosynthesis genes and SlMADS1 in tomato. DOI: 10.1038/s41438-020-00431-9 ; PMID: 33384413
Related News:
Gene Resources:
Orthologs:
Sequences:
cDNA Sequence
- >Solyc01g100200.3.1
TTCTAACCCTTCTTCTCTTCCTATTATTATACACTTGTATATATTCAAAGAGATATCATTTCTTAGCTTCCAACCTCAATACTACTTCTTCTACTACCACTTCAACAGCTATATATCAGGTACCATTCTCAGTTCCTATTTTTTGTTTCAGTTCTTCTTCTTCTTCTTCTTCTTTTTTTGGTTAGAATTTCTGGGATTGCTTTGATTTCTTCAATCAAACATCTCAGAATTTAGTAGCTCAAACCAATTTCCATGGAAGCCCTTTTTCAAGAACAGCTTTTTCCTTGTGCTGATTCTTTTATTTTTAGGCACCCTTCCATTCCAATGGATCCAAGAAAAGAAGTTATACAAAATGGACTCAATAATCATCCTAGTTTTGATCAAGATTACTTTTCAAATCATGTTGTTGGAGTGGGAGATTCTTCTCCTCCTCCTCAAGAGGAAGGGGAAAAGGACTATTCTGATGCAATGTACAAATTCTTAAGTCAGATGCTTATGGAAGAAGATGATTTGGAGAATAAGCCATGTATGTTTCATGACTGCATGGCTCTCCAAGCTAAAGAGAGATACTTATCTGATGTACTTCATGGATCCGAAAACAACTATTCCCCACAATCTGTCATTATCAATCCACACGATTCCTCTAGTTTTCTCAGCAACTATTCACCTGATTCTATTGAGTCACCTCAATGGGATCTTAATTTCGAATCCCCTGCTTCCATGTCCACTTTATCTAATCATGACTCTTTCTTCACTTCCTTCGGCAATGGCCATTTTGAAGAAGGAGCTGTCAATGTGTTACAAAGTGGCAGCAGCAGCAATTCACCAACTGGTCTGAGGGAAAAGAAAAATCGACATCGAGGAGATGTTGCTGCAGACCAGCAGAGGAGTAACAAACAGATGGCTACATTTGTTCATGATGAATCTGAACCATTGGAAATGTATGACAATGTGTTGCTTTGTTTAAACAATCCATATGTGGAACAGCATAGTGCTACTAGTATCACTTCCTACTCGCCGCCTAATGAAGCCAAAAAAACAAGCAAAGTTGGAAGGCCGAGAGGTGGTAGGAAGCATAGCAGCATTGTCAAGAAGGAAATGGTGGATTTGAGGGCTTTGTTGACTCAGTGTGCGCAGGCCATGGCAAACTATGATAGCAGAACAGCTAATGAGCTGCTGATGCGGATAAGAGAACACTCTACACCTCATGGCGATGGGACGGAGAGGTTGGCTCATTATCTTGCCAATGCCCTTGAAGCACGCCTGTCCGGCACGGGAACAGCTTTGTATACAGCCTACGCACCCAGTAGGATATCAGCTGCTAACATTTTGAAAGCTTACAAGGCATTTATCAGAGCATGTCCATTCAAGTTGCTGTCAAACATTTTCGCAAACAAGTATATCCGAAAGGTCATTGCTGGAGCACCAAAGATACACATAATTGATTTTGGTATCTTGTATGGTTTCCAATGGCCCTGTCTCATACAAGGTCTATCCATGAGGGCTGGGGGACCTCCAGAGCTTCGCATTACTGGAATCGATCTTCCCCAGCCAGGTTTCAAGCCAGCAGGGAGGGTTGAGGAGACAGGGCGTCGCTTGGAAAAGTACTGCAAGCGATTTAGTGTCCCTTTCGTATTCAAAGCCATCGCGAAGAAGTGGGAAAGCATCACGCTTGAAGAGCTTGAGGTTCAAAGGGATGAAGTGTTGGTAGTTAACAGTTTGTATAGGCTAGGAAACATACCTGATGAGACAGTAGTACCAAACAGTCCAAGGGATGCTGTCCTGAATTTAATCAGGAGGATCCGTCCTGATTTATTCATCCATGGTGCGTTGAACGGTACTTTCAACACTCCATTTTTCGTCACACGATTCAGGGAGGCGCTTTTTCACTTCTCTTCACTGTATGATATGTTTGAGGCTACTCTTCCCCGCGAGGACGAGGACAGAAAGCTATTCGAGGAAGAGGTTTTTGCAAGAGATGCTATGAACGTGATTGCTTGTGAAGGGACAGAGAGAGTTGAGAGACCTGAAACATACAAGCAGTGGCAACTTAGATGCGTTAGAGCTGGATTCAAACAGGTGCCACTTGACCAGGAGATTGTGAAGATAGTGAGGAATAAAGTGAGGTCGGAGTACCACAGGGACTTCTCAGTTGATGAAGATGGACACTGGATGCTACAAGGATGGAAAGGACGCGTAATTTACGCTCTCTCTTGTTGGAAGCCTACAAAGCAGTCTGTAAAATTAGTCTAGTTTATCAGGCCATTTCTTCTATGGCTGTATTTTCCTATGCTAGTGGAGTTTTATCTTTGTTTGTAGCAGCAGCATTTTGGAATTTATTCTAATTTAGTTTCACTCTCTCAAATGCTTCAAAAATTTCTCTCACTTGACGTGCAGAAGCATTACAAATGAAAGCCTTCTTTGAAGCTTAAACTCAAATAGCTTACGTGCATTTGGATTTTGGA
CDS Sequence
- >Solyc01g100200.3.1
ATGGAAGCCCTTTTTCAAGAACAGCTTTTTCCTTGTGCTGATTCTTTTATTTTTAGGCACCCTTCCATTCCAATGGATCCAAGAAAAGAAGTTATACAAAATGGACTCAATAATCATCCTAGTTTTGATCAAGATTACTTTTCAAATCATGTTGTTGGAGTGGGAGATTCTTCTCCTCCTCCTCAAGAGGAAGGGGAAAAGGACTATTCTGATGCAATGTACAAATTCTTAAGTCAGATGCTTATGGAAGAAGATGATTTGGAGAATAAGCCATGTATGTTTCATGACTGCATGGCTCTCCAAGCTAAAGAGAGATACTTATCTGATGTACTTCATGGATCCGAAAACAACTATTCCCCACAATCTGTCATTATCAATCCACACGATTCCTCTAGTTTTCTCAGCAACTATTCACCTGATTCTATTGAGTCACCTCAATGGGATCTTAATTTCGAATCCCCTGCTTCCATGTCCACTTTATCTAATCATGACTCTTTCTTCACTTCCTTCGGCAATGGCCATTTTGAAGAAGGAGCTGTCAATGTGTTACAAAGTGGCAGCAGCAGCAATTCACCAACTGGTCTGAGGGAAAAGAAAAATCGACATCGAGGAGATGTTGCTGCAGACCAGCAGAGGAGTAACAAACAGATGGCTACATTTGTTCATGATGAATCTGAACCATTGGAAATGTATGACAATGTGTTGCTTTGTTTAAACAATCCATATGTGGAACAGCATAGTGCTACTAGTATCACTTCCTACTCGCCGCCTAATGAAGCCAAAAAAACAAGCAAAGTTGGAAGGCCGAGAGGTGGTAGGAAGCATAGCAGCATTGTCAAGAAGGAAATGGTGGATTTGAGGGCTTTGTTGACTCAGTGTGCGCAGGCCATGGCAAACTATGATAGCAGAACAGCTAATGAGCTGCTGATGCGGATAAGAGAACACTCTACACCTCATGGCGATGGGACGGAGAGGTTGGCTCATTATCTTGCCAATGCCCTTGAAGCACGCCTGTCCGGCACGGGAACAGCTTTGTATACAGCCTACGCACCCAGTAGGATATCAGCTGCTAACATTTTGAAAGCTTACAAGGCATTTATCAGAGCATGTCCATTCAAGTTGCTGTCAAACATTTTCGCAAACAAGTATATCCGAAAGGTCATTGCTGGAGCACCAAAGATACACATAATTGATTTTGGTATCTTGTATGGTTTCCAATGGCCCTGTCTCATACAAGGTCTATCCATGAGGGCTGGGGGACCTCCAGAGCTTCGCATTACTGGAATCGATCTTCCCCAGCCAGGTTTCAAGCCAGCAGGGAGGGTTGAGGAGACAGGGCGTCGCTTGGAAAAGTACTGCAAGCGATTTAGTGTCCCTTTCGTATTCAAAGCCATCGCGAAGAAGTGGGAAAGCATCACGCTTGAAGAGCTTGAGGTTCAAAGGGATGAAGTGTTGGTAGTTAACAGTTTGTATAGGCTAGGAAACATACCTGATGAGACAGTAGTACCAAACAGTCCAAGGGATGCTGTCCTGAATTTAATCAGGAGGATCCGTCCTGATTTATTCATCCATGGTGCGTTGAACGGTACTTTCAACACTCCATTTTTCGTCACACGATTCAGGGAGGCGCTTTTTCACTTCTCTTCACTGTATGATATGTTTGAGGCTACTCTTCCCCGCGAGGACGAGGACAGAAAGCTATTCGAGGAAGAGGTTTTTGCAAGAGATGCTATGAACGTGATTGCTTGTGAAGGGACAGAGAGAGTTGAGAGACCTGAAACATACAAGCAGTGGCAACTTAGATGCGTTAGAGCTGGATTCAAACAGGTGCCACTTGACCAGGAGATTGTGAAGATAGTGAGGAATAAAGTGAGGTCGGAGTACCACAGGGACTTCTCAGTTGATGAAGATGGACACTGGATGCTACAAGGATGGAAAGGACGCGTAATTTACGCTCTCTCTTGTTGGAAGCCTACAAAGCAGTCTGTAAAATTAGTCTAG
Protein Sequence
- >Solyc01g100200.3.1
MEALFQEQLFPCADSFIFRHPSIPMDPRKEVIQNGLNNHPSFDQDYFSNHVVGVGDSSPPPQEEGEKDYSDAMYKFLSQMLMEEDDLENKPCMFHDCMALQAKERYLSDVLHGSENNYSPQSVIINPHDSSSFLSNYSPDSIESPQWDLNFESPASMSTLSNHDSFFTSFGNGHFEEGAVNVLQSGSSSNSPTGLREKKNRHRGDVAADQQRSNKQMATFVHDESEPLEMYDNVLLCLNNPYVEQHSATSITSYSPPNEAKKTSKVGRPRGGRKHSSIVKKEMVDLRALLTQCAQAMANYDSRTANELLMRIREHSTPHGDGTERLAHYLANALEARLSGTGTALYTAYAPSRISAANILKAYKAFIRACPFKLLSNIFANKYIRKVIAGAPKIHIIDFGILYGFQWPCLIQGLSMRAGGPPELRITGIDLPQPGFKPAGRVEETGRRLEKYCKRFSVPFVFKAIAKKWESITLEELEVQRDEVLVVNSLYRLGNIPDETVVPNSPRDAVLNLIRRIRPDLFIHGALNGTFNTPFFVTRFREALFHFSSLYDMFEATLPREDEDRKLFEEEVFARDAMNVIACEGTERVERPETYKQWQLRCVRAGFKQVPLDQEIVKIVRNKVRSEYHRDFSVDEDGHWMLQGWKGRVIYALSCWKPTKQSVKLV*